RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 H3BRJ5 948 aa14.59□□□□□ -0.07
MUC1-223ENST00000611571 FANCGO15287 622 aa14.59□□□□□ -0.07
MUC1-223ENST00000611571 PDGFRBP09619 1106 aa14.59□□□□□ -0.07
MUC1-223ENST00000611571 NPTX2P47972 431 aa14.59□□□□□ -0.07
MUC1-223ENST00000611571 HEATR6Q6AI08 1181 aaKnown RBP14.59□□□□□ -0.07
MUC1-223ENST00000611571 ACAD10Q6JQN1 1059 aa14.59□□□□□ -0.07
MUC1-223ENST00000611571 TRIM56Q9BRZ2 755 aaKnown RBP14.59□□□□□ -0.07
MUC1-223ENST00000611571 GDF3Q9NR23 364 aa14.59□□□□□ -0.07
MUC1-223ENST00000611571 PHTF1Q9UMS5 762 aa14.59□□□□□ -0.07
MUC1-223ENST00000611571 AGAP1Q9UPQ3 857 aa14.59□□□□□ -0.07
MUC1-223ENST00000611571 CLGNO14967 610 aa14.59□□□□□ -0.07
MUC1-223ENST00000611571 LCP1P13796 627 aa14.59□□□□□ -0.07
MUC1-223ENST00000611571 GYS1P13807 737 aa14.59□□□□□ -0.07
MUC1-223ENST00000611571 ENOSF1Q7L5Y1 443 aa14.59□□□□□ -0.07
MUC1-223ENST00000611571 PID1Q7Z2X4 250 aa14.59□□□□□ -0.07
MUC1-223ENST00000611571 DCPSQ96C86 337 aaKnown RBP14.59□□□□□ -0.07
MUC1-223ENST00000611571 DLGAP2Q9P1A6 1054 aa14.59□□□□□ -0.07
MUC1-223ENST00000611571 NAALADL1Q9UQQ1 740 aa14.59□□□□□ -0.07
MUC1-223ENST00000611571 PCDHGC5Q9Y5F6 944 aa14.59□□□□□ -0.07
MUC1-223ENST00000611571 FOXO6A8MYZ6 492 aa14.58□□□□□ -0.08
MUC1-223ENST00000611571 UBTFL6P0CB48 400 aaPredicted RBP14.58□□□□□ -0.08
MUC1-223ENST00000611571 ANXA13P27216 316 aa14.58□□□□□ -0.08
MUC1-223ENST00000611571 SLC1A1P43005 524 aa14.58□□□□□ -0.08
MUC1-223ENST00000611571 TMEM119Q4V9L6 283 aa14.58□□□□□ -0.08
MUC1-223ENST00000611571 KRT80Q6KB66 452 aa14.58□□□□□ -0.08
MUC1-223ENST00000611571 CEP70Q8NHQ1 597 aa14.58□□□□□ -0.08
MUC1-223ENST00000611571 MRPL4Q9BYD3 311 aaKnown RBP14.58□□□□□ -0.08
MUC1-223ENST00000611571 ABCF3Q9NUQ8 709 aa14.58□□□□□ -0.08
MUC1-223ENST00000611571 PJA2O43164 708 aa14.58□□□□□ -0.08
MUC1-223ENST00000611571 CSPG5O95196 566 aa14.58□□□□□ -0.08
MUC1-223ENST00000611571 ZSCAN5DPP0CG00 497 aa14.58□□□□□ -0.08
MUC1-223ENST00000611571 OCRLQ01968 901 aa14.58□□□□□ -0.08
MUC1-223ENST00000611571 PTK7Q13308 1070 aa14.58□□□□□ -0.08
MUC1-223ENST00000611571 GRAMD1AQ96CP6 724 aa14.58□□□□□ -0.08
MUC1-223ENST00000611571 LRGUKQ96M69 825 aa14.58□□□□□ -0.08
MUC1-223ENST00000611571 RIT2Q99578 217 aa14.58□□□□□ -0.08
MUC1-223ENST00000611571 FBXO40Q9UH90 709 aa14.58□□□□□ -0.08
MUC1-223ENST00000611571 BCAP29Q9UHQ4 241 aa14.58□□□□□ -0.08
MUC1-223ENST00000611571 STRIP2Q9ULQ0 834 aa14.58□□□□□ -0.08
MUC1-223ENST00000611571 SNX9Q9Y5X1 595 aa14.58□□□□□ -0.08
MUC1-223ENST00000611571 TNS2Q63HR2 1409 aa14.58□□□□□ -0.08
MUC1-223ENST00000611571 M0QZ92 97 aa14.58□□□□□ -0.08
MUC1-223ENST00000611571 ARPP19P56211 112 aa14.58□□□□□ -0.08
MUC1-223ENST00000611571 ARMC2Q8NEN0 867 aa14.58□□□□□ -0.08
MUC1-223ENST00000611571 RPS6KC1Q96S38 1066 aa14.58□□□□□ -0.08
MUC1-223ENST00000611571 Q9H521 79 aa14.58□□□□□ -0.08
MUC1-223ENST00000611571 NDE1Q9NXR1 346 aa14.58□□□□□ -0.08
MUC1-223ENST00000611571 PSMC3IPQ9P2W1 217 aaPredicted RBP14.58□□□□□ -0.08
MUC1-223ENST00000611571 HEY2Q9UBP5 337 aa14.58□□□□□ -0.08
MUC1-223ENST00000611571 SPDYE16A6NNV3 312 aaPredicted RBP14.57□□□□□ -0.08
MUC1-223ENST00000611571 DCDC2CA8MYV0 355 aa14.57□□□□□ -0.08
MUC1-223ENST00000611571 NQO1P15559 274 aaKnown RBP14.57□□□□□ -0.08
MUC1-223ENST00000611571 PPP3CAQ08209 521 aa14.57□□□□□ -0.08
MUC1-223ENST00000611571 SPDYE2Q495Y8 402 aa14.57□□□□□ -0.08
MUC1-223ENST00000611571 APTXQ7Z2E3 356 aaKnown RBP14.57□□□□□ -0.08
MUC1-223ENST00000611571 SAMD7Q7Z3H4 446 aa14.57□□□□□ -0.08
MUC1-223ENST00000611571 RCOR2Q8IZ40 523 aa14.57□□□□□ -0.08
MUC1-223ENST00000611571 FEZF2Q8TBJ5 459 aa14.57□□□□□ -0.08
MUC1-223ENST00000611571 TUBB6Q9BUF5 446 aa14.57□□□□□ -0.08
MUC1-223ENST00000611571 BCAS3Q9H6U6 928 aa14.57□□□□□ -0.08
MUC1-223ENST00000611571 SAE1Q9UBE0 346 aaPredicted RBP14.57□□□□□ -0.08
MUC1-223ENST00000611571 TRAF3IP3Q9Y228 551 aa14.57□□□□□ -0.08
MUC1-223ENST00000611571 SUGT1Q9Y2Z0 365 aa14.57□□□□□ -0.08
MUC1-223ENST00000611571 ANKRD20A8PQ5CZ79 823 aa14.57□□□□□ -0.08
MUC1-223ENST00000611571 LLGL2Q6P1M3 1020 aa14.57□□□□□ -0.08
MUC1-223ENST00000611571 COL23A1Q86Y22 540 aaPredicted RBP14.57□□□□□ -0.08
MUC1-223ENST00000611571 NDUFAF2Q8N183 169 aa14.57□□□□□ -0.08
MUC1-223ENST00000611571 OTUD5Q96G74 571 aa14.57□□□□□ -0.08
MUC1-223ENST00000611571 GTSE1Q9NYZ3 720 aa14.57□□□□□ -0.08
MUC1-223ENST00000611571 A8MXQ7 604 aa14.57□□□□□ -0.08
MUC1-223ENST00000611571 SH3BP5O60239 455 aa14.57□□□□□ -0.08
MUC1-223ENST00000611571 TCN1P20061 433 aaPredicted RBP14.57□□□□□ -0.08
MUC1-223ENST00000611571 EMC2Q15006 297 aa14.57□□□□□ -0.08
MUC1-223ENST00000611571 TKFCQ3LXA3 575 aa14.57□□□□□ -0.08
MUC1-223ENST00000611571 XKR3Q5GH77 459 aa14.57□□□□□ -0.08
MUC1-223ENST00000611571 ROPN1BQ9BZX4 212 aaPredicted RBP14.57□□□□□ -0.08
MUC1-223ENST00000611571 ROPN1Q9HAT0 212 aaPredicted RBP14.57□□□□□ -0.08
MUC1-223ENST00000611571 PRKCBP05771 671 aa14.56□□□□□ -0.08
MUC1-223ENST00000611571 CUL3Q13618 768 aa14.56□□□□□ -0.08
MUC1-223ENST00000611571 C11orf63Q6NUN7 778 aa14.56□□□□□ -0.08
MUC1-223ENST00000611571 TMEM154Q6P9G4 183 aa14.56□□□□□ -0.08
MUC1-223ENST00000611571 TRIM72Q6ZMU5 477 aa14.56□□□□□ -0.08
MUC1-223ENST00000611571 INPP4AQ96PE3 977 aaPredicted RBP14.56□□□□□ -0.08
MUC1-223ENST00000611571 CCDC68Q9H2F9 335 aa14.56□□□□□ -0.08
MUC1-223ENST00000611571 ACAD9Q9H845 621 aa14.56□□□□□ -0.08
MUC1-223ENST00000611571 ADA2Q9NZK5 511 aa14.56□□□□□ -0.08
MUC1-223ENST00000611571 TRIM49D1C9J1S8 452 aa14.56□□□□□ -0.08
MUC1-223ENST00000611571 RIPK2O43353 540 aa14.56□□□□□ -0.08
MUC1-223ENST00000611571 CTCFP49711 727 aaPredicted RBP14.56□□□□□ -0.08
MUC1-223ENST00000611571 RHBDL3P58872 404 aa14.56□□□□□ -0.08
MUC1-223ENST00000611571 THOC5Q13769 683 aaKnown RBP14.56□□□□□ -0.08
MUC1-223ENST00000611571 NOP9Q86U38 636 aaKnown RBP14.56□□□□□ -0.08
MUC1-223ENST00000611571 MTDHQ86UE4 582 aaKnown RBP14.56□□□□□ -0.08
MUC1-223ENST00000611571 RASSF3Q86WH2 238 aa14.56□□□□□ -0.08
MUC1-223ENST00000611571 FUKQ8N0W3 1084 aa14.56□□□□□ -0.08
MUC1-223ENST00000611571 KIF12Q96FN5 646 aa14.56□□□□□ -0.08
MUC1-223ENST00000611571 SPATA33Q96N06 139 aa14.56□□□□□ -0.08
MUC1-223ENST00000611571 GPATCH2LQ9NWQ4 482 aa14.56□□□□□ -0.08
MUC1-223ENST00000611571 PIH1D1Q9NWS0 290 aaKnown RBP14.56□□□□□ -0.08
MUC1-223ENST00000611571 ZFATQ9P243 1243 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms