RNA–Protein interactions for RNA: ENST00000611415.4

TNS1-220, Transcript of tensin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNS1, Length 6,509 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNS1-220ENST00000611415 EFCAB14O75071 495 aa12.54□□□□□ -0.4
TNS1-220ENST00000611415 PMS1P54277 932 aaKnown RBP12.54□□□□□ -0.4
TNS1-220ENST00000611415 FBXW4P57775 412 aa12.54□□□□□ -0.4
TNS1-220ENST00000611415 STK4Q13043 487 aa12.54□□□□□ -0.4
TNS1-220ENST00000611415 KYNUQ16719 465 aa12.54□□□□□ -0.4
TNS1-220ENST00000611415 ACCSLQ4AC99 568 aa12.54□□□□□ -0.4
TNS1-220ENST00000611415 ELOA2Q8IYF1 753 aaPredicted RBP12.54□□□□□ -0.4
TNS1-220ENST00000611415 TTC30BQ8N4P2 665 aa12.54□□□□□ -0.4
TNS1-220ENST00000611415 RNF149Q8NC42 400 aa12.54□□□□□ -0.4
TNS1-220ENST00000611415 B4GALNT2Q8NHY0 566 aa12.54□□□□□ -0.4
TNS1-220ENST00000611415 OTUB1Q96FW1 271 aaPredicted RBP12.54□□□□□ -0.4
TNS1-220ENST00000611415 PDGFRAP16234 1089 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 CORO7P57737 925 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 UGP2Q16851 508 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 GALNT4Q8N4A0 578 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 HNRNPLLQ8WVV9 542 aaKnown RBP12.53□□□□□ -0.4
TNS1-220ENST00000611415 KRT35Q92764 455 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 PTPRN2Q92932 1015 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 NSUN4Q96CB9 384 aaKnown RBP12.53□□□□□ -0.4
TNS1-220ENST00000611415 RPAP3Q9H6T3 665 aaPredicted RBP12.53□□□□□ -0.4
TNS1-220ENST00000611415 PAK5Q9P286 719 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 PXDNLA1KZ92 1463 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 TBX3O15119 743 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 EIF3DO15371 548 aaKnown RBP eCLIP12.53□□□□□ -0.4
TNS1-220ENST00000611415 BARGINQ6ZT62 677 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 ITM2BQ9Y287 266 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 ENO4A6NNW6 628 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 SMAPO00193 183 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 ZNF197O14709 1029 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 SNRPAP09012 282 aaKnown RBP12.53□□□□□ -0.4
TNS1-220ENST00000611415 VCAM1P19320 739 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 COILP38432 576 aaPredicted RBP12.53□□□□□ -0.4
TNS1-220ENST00000611415 NCOA4Q13772 614 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 SGSM1Q2NKQ1 1148 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 NYAP1Q6ZVC0 841 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 PRUNE1Q86TP1 453 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 PCYOX1LQ8NBM8 494 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 UBTFL6P0CB48 400 aaPredicted RBP12.53□□□□□ -0.4
TNS1-220ENST00000611415 SLC9A1P19634 815 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 ACOT2P49753 483 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 WDR72Q3MJ13 1102 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 RABL6Q3YEC7 729 aaPredicted RBP12.53□□□□□ -0.4
TNS1-220ENST00000611415 KDM7AQ6ZMT4 941 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 TRAPPC11Q7Z392 1133 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 COL23A1Q86Y22 540 aaPredicted RBP12.53□□□□□ -0.4
TNS1-220ENST00000611415 FAM129AQ9BZQ8 928 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 S100A5P33763 92 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 RGS7P49802 495 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 NOA1Q8NC60 698 aaKnown RBP12.53□□□□□ -0.4
TNS1-220ENST00000611415 OSBPL8Q9BZF1 889 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 AGAP1Q9UPQ3 857 aa12.53□□□□□ -0.4
TNS1-220ENST00000611415 E9PCH4 1651 aa12.52□□□□□ -0.4
TNS1-220ENST00000611415 PPP1R3GB7ZBB8 358 aa12.52□□□□□ -0.4
TNS1-220ENST00000611415 ADCY3O60266 1144 aa12.52□□□□□ -0.4
TNS1-220ENST00000611415 WDR47O94967 919 aa12.52□□□□□ -0.4
TNS1-220ENST00000611415 SEC24CP53992 1094 aa12.52□□□□□ -0.4
TNS1-220ENST00000611415 TRIP10Q15642 601 aa12.52□□□□□ -0.4
TNS1-220ENST00000611415 OLFML2BQ68BL8 750 aa12.52□□□□□ -0.4
TNS1-220ENST00000611415 PPP4R4Q6NUP7 873 aa12.52□□□□□ -0.4
TNS1-220ENST00000611415 DDX42Q86XP3 938 aaKnown RBP eCLIP12.52□□□□□ -0.4
TNS1-220ENST00000611415 ATPAF2Q8N5M1 289 aa12.52□□□□□ -0.4
TNS1-220ENST00000611415 MED15Q96RN5 788 aa12.52□□□□□ -0.4
TNS1-220ENST00000611415 TJP2Q9UDY2 1190 aa12.52□□□□□ -0.4
TNS1-220ENST00000611415 BLOC1S6Q9UL45 172 aa12.52□□□□□ -0.4
TNS1-220ENST00000611415 TULP4Q9NRJ4 1543 aa12.52□□□□□ -0.4
TNS1-220ENST00000611415 EEF2KO00418 725 aaKnown RBP12.52□□□□□ -0.4
TNS1-220ENST00000611415 HNRNPH1P31943 449 aaKnown RBP12.52□□□□□ -0.4
TNS1-220ENST00000611415 HSD17B3P37058 310 aa12.52□□□□□ -0.4
TNS1-220ENST00000611415 GRIK1P39086 918 aa12.52□□□□□ -0.4
TNS1-220ENST00000611415 ZNF543Q08ER8 600 aa12.52□□□□□ -0.4
TNS1-220ENST00000611415 COBLL1Q53SF7 1204 aa12.52□□□□□ -0.4
TNS1-220ENST00000611415 SPDYAQ5MJ70 313 aa12.52□□□□□ -0.4
TNS1-220ENST00000611415 APPL2Q8NEU8 664 aa12.52□□□□□ -0.4
TNS1-220ENST00000611415 FAM118BQ9BPY3 351 aa12.52□□□□□ -0.4
TNS1-220ENST00000611415 PLA2G12BQ9BX93 195 aa12.52□□□□□ -0.4
TNS1-220ENST00000611415 HERC5Q9UII4 1024 aaKnown RBP12.52□□□□□ -0.4
TNS1-220ENST00000611415 FARP1Q9Y4F1 1045 aaPredicted RBP12.52□□□□□ -0.4
TNS1-220ENST00000611415 SPRP35270 261 aaPredicted RBP12.52□□□□□ -0.41
TNS1-220ENST00000611415 ATXN3P54252 364 aaPredicted RBP12.52□□□□□ -0.41
TNS1-220ENST00000611415 GEMIN4P57678 1058 aaKnown RBP12.52□□□□□ -0.41
TNS1-220ENST00000611415 RBP5P82980 135 aa12.52□□□□□ -0.41
TNS1-220ENST00000611415 SPP2Q13103 211 aa12.52□□□□□ -0.41
TNS1-220ENST00000611415 SBK1Q52WX2 424 aa12.52□□□□□ -0.41
TNS1-220ENST00000611415 KCNV1Q6PIU1 500 aa12.52□□□□□ -0.41
TNS1-220ENST00000611415 APOBEC3FQ8IUX4 373 aaKnown RBP12.52□□□□□ -0.41
TNS1-220ENST00000611415 FAM162AQ96A26 154 aa12.52□□□□□ -0.41
TNS1-220ENST00000611415 ZFYVE19Q96K21 471 aa12.52□□□□□ -0.41
TNS1-220ENST00000611415 SERPINB12Q96P63 405 aa12.52□□□□□ -0.41
TNS1-220ENST00000611415 MRGBPQ9NV56 204 aa12.52□□□□□ -0.41
TNS1-220ENST00000611415 CEP152O94986 1710 aa12.52□□□□□ -0.41
TNS1-220ENST00000611415 VHLP40337 213 aa12.52□□□□□ -0.41
TNS1-220ENST00000611415 THEMIS2Q5TEJ8 643 aa12.52□□□□□ -0.41
TNS1-220ENST00000611415 USP33Q8TEY7 942 aa12.52□□□□□ -0.41
TNS1-220ENST00000611415 OTULINQ96BN8 352 aa12.52□□□□□ -0.41
TNS1-220ENST00000611415 DDX50Q9BQ39 737 aaKnown RBP12.52□□□□□ -0.41
TNS1-220ENST00000611415 MTMR4Q9NYA4 1195 aa12.52□□□□□ -0.41
TNS1-220ENST00000611415 DLC1Q96QB1 1528 aa12.52□□□□□ -0.41
TNS1-220ENST00000611415 ABCA6Q8N139 1617 aa12.52□□□□□ -0.41
TNS1-220ENST00000611415 MYO1GB0I1T2 1018 aa12.52□□□□□ -0.41
TNS1-220ENST00000611415 ATMINO43313 823 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms