RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 PNMA6FA0A0J9YX94 578 aa12.64□□□□□ -0.39
TP53-220ENST00000610623 E9PMD0 336 aa12.64□□□□□ -0.39
TP53-220ENST00000610623 NDUFV2P19404 249 aa12.64□□□□□ -0.39
TP53-220ENST00000610623 COMTP21964 271 aa12.64□□□□□ -0.39
TP53-220ENST00000610623 MARCKSL1P49006 195 aa12.64□□□□□ -0.39
TP53-220ENST00000610623 ADCY7P51828 1080 aa12.64□□□□□ -0.39
TP53-220ENST00000610623 TRABD2AQ86V40 505 aa12.64□□□□□ -0.39
TP53-220ENST00000610623 CD101Q93033 1021 aa12.64□□□□□ -0.39
TP53-220ENST00000610623 PLVAPQ9BX97 442 aa12.64□□□□□ -0.39
TP53-220ENST00000610623 SUDS3Q9H7L9 328 aaPredicted RBP12.64□□□□□ -0.39
TP53-220ENST00000610623 VAT1LQ9HCJ6 419 aa12.64□□□□□ -0.39
TP53-220ENST00000610623 KRT82Q9NSB4 513 aa12.64□□□□□ -0.39
TP53-220ENST00000610623 KIAA1024Q9UPX6 916 aa12.64□□□□□ -0.39
TP53-220ENST00000610623 FRMPD4Q14CM0 1322 aa12.64□□□□□ -0.39
TP53-220ENST00000610623 NPHP3-ACAD11A0A0J9YXS1 232 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 TCRBV7S2A1N4TA0A589 114 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 GYG2O15488 501 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 SORBS3O60504 671 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 MTA2O94776 668 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 NR3C1P04150 777 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 ABHD2P08910 425 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 CCDC166P0CW27 439 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 IVDP26440 423 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 TPP2P29144 1249 aaPredicted RBP12.63□□□□□ -0.39
TP53-220ENST00000610623 GPC5P78333 572 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 ADCY1Q08828 1119 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 PTK6Q13882 451 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 MAP7Q14244 749 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 CEP128Q6ZU80 1094 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 MTDHQ86UE4 582 aaKnown RBP12.63□□□□□ -0.39
TP53-220ENST00000610623 ARHGAP24Q8N264 748 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 HAS1Q92839 578 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 MCUR1Q96AQ8 359 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 HIC2Q96JB3 615 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 UBA5Q9GZZ9 404 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 METTL5Q9NRN9 209 aaKnown RBP12.63□□□□□ -0.39
TP53-220ENST00000610623 TAS2R14Q9NYV8 317 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 PI4KBQ9UBF8 816 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 BLOC1S6Q9UL45 172 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 SPTLC1O15269 473 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 MARCH6O60337 910 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 EXOC3O60645 756 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 GPR37L1O60883 481 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 CYP1A1P04798 512 aaPredicted RBP12.63□□□□□ -0.39
TP53-220ENST00000610623 FAM163BP0C2L3 166 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 PABPC4LP0CB38 370 aaKnown RBP12.63□□□□□ -0.39
TP53-220ENST00000610623 UBTFL6P0CB48 400 aaPredicted RBP12.63□□□□□ -0.39
TP53-220ENST00000610623 TROVE2P10155 538 aaKnown RBP eCLIP12.63□□□□□ -0.39
TP53-220ENST00000610623 DESP17661 470 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 CASP5P51878 434 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 ITGA8P53708 1063 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 NFIAQ12857 509 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 KIF22Q14807 665 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 TNIP1Q15025 636 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 DBN1Q16643 649 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 BMT2Q1RMZ1 405 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 TDRPQ86YL5 185 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 KIAA0825Q8IV33 1275 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 VPS52Q8N1B4 723 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 NME8Q8N427 588 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 GRK7Q8WTQ7 553 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 PTCD3Q96EY7 689 aaKnown RBP12.63□□□□□ -0.39
TP53-220ENST00000610623 NSL1Q96IY1 281 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 ZHX3Q9H4I2 956 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 SEPT11Q9NVA2 429 aaKnown RBP12.63□□□□□ -0.39
TP53-220ENST00000610623 NYAP2Q9P242 653 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 DNAJB4Q9UDY4 337 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 DDX25Q9UHL0 483 aaKnown RBP12.63□□□□□ -0.39
TP53-220ENST00000610623 ZMYM2Q9UBW7 1377 aa12.63□□□□□ -0.39
TP53-220ENST00000610623 F8W8V4 182 aa12.62□□□□□ -0.39
TP53-220ENST00000610623 FAM200BP0CF97 657 aa12.62□□□□□ -0.39
TP53-220ENST00000610623 CHRNB2P17787 502 aa12.62□□□□□ -0.39
TP53-220ENST00000610623 HOXD13P35453 343 aa12.62□□□□□ -0.39
TP53-220ENST00000610623 SCNN1BP51168 640 aa12.62□□□□□ -0.39
TP53-220ENST00000610623 SLC12A3P55017 1021 aa12.62□□□□□ -0.39
TP53-220ENST00000610623 RTP1P59025 263 aa12.62□□□□□ -0.39
TP53-220ENST00000610623 DSG1Q02413 1049 aa12.62□□□□□ -0.39
TP53-220ENST00000610623 TMED2Q15363 201 aa12.62□□□□□ -0.39
TP53-220ENST00000610623 ARSHQ5FYA8 562 aa12.62□□□□□ -0.39
TP53-220ENST00000610623 MARK2Q7KZI7 788 aaKnown RBP12.62□□□□□ -0.39
TP53-220ENST00000610623 OTOAQ7RTW8 1153 aa12.62□□□□□ -0.39
TP53-220ENST00000610623 ST13P4Q8IZP2 240 aaPredicted RBP12.62□□□□□ -0.39
TP53-220ENST00000610623 BBOF1Q8ND07 529 aa12.62□□□□□ -0.39
TP53-220ENST00000610623 DCAF4Q8WV16 495 aa12.62□□□□□ -0.39
TP53-220ENST00000610623 MKL1Q969V6 931 aa12.62□□□□□ -0.39
TP53-220ENST00000610623 TTC25Q96NG3 672 aa12.62□□□□□ -0.39
TP53-220ENST00000610623 POP1Q99575 1024 aaKnown RBP12.62□□□□□ -0.39
TP53-220ENST00000610623 AGPAT1Q99943 283 aa12.62□□□□□ -0.39
TP53-220ENST00000610623 GPR88Q9GZN0 384 aa12.62□□□□□ -0.39
TP53-220ENST00000610623 GLT8D2Q9H1C3 349 aa12.62□□□□□ -0.39
TP53-220ENST00000610623 JMJD4Q9H9V9 463 aa12.62□□□□□ -0.39
TP53-220ENST00000610623 ANAPC5Q9UJX4 755 aa12.62□□□□□ -0.39
TP53-220ENST00000610623 FSCN2O14926 492 aa12.62□□□□□ -0.39
TP53-220ENST00000610623 ENTPD3O75355 529 aa12.62□□□□□ -0.39
TP53-220ENST00000610623 HAUS5O94927 633 aa12.62□□□□□ -0.39
TP53-220ENST00000610623 GAS8O95995 478 aa12.62□□□□□ -0.39
TP53-220ENST00000610623 ZCCHC18P0CG32 403 aa12.62□□□□□ -0.39
TP53-220ENST00000610623 SGO2Q562F6 1265 aa12.62□□□□□ -0.39
TP53-220ENST00000610623 KBTBD2Q8IY47 623 aa12.62□□□□□ -0.39
TP53-220ENST00000610623 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.62□□□□□ -0.397e-7■■□□□ 13
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms