RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 MARCKSL1P49006 195 aa12.73□□□□□ -0.37
USP6NL-206ENST00000609853 TAP1Q03518 808 aa12.73□□□□□ -0.37
USP6NL-206ENST00000609853 IRF5Q13568 498 aa12.73□□□□□ -0.37
USP6NL-206ENST00000609853 TRADDQ15628 312 aa12.73□□□□□ -0.37
USP6NL-206ENST00000609853 CCL15Q16663 113 aa12.73□□□□□ -0.37
USP6NL-206ENST00000609853 LEKR1Q6ZMV7 388 aa12.73□□□□□ -0.37
USP6NL-206ENST00000609853 JAMLQ86YT9 394 aa12.73□□□□□ -0.37
USP6NL-206ENST00000609853 RIN2Q8WYP3 895 aaPredicted RBP12.73□□□□□ -0.37
USP6NL-206ENST00000609853 ASB7Q9H672 318 aa12.73□□□□□ -0.37
USP6NL-206ENST00000609853 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.73□□□□□ -0.37
USP6NL-206ENST00000609853 PCDHGC3Q9UN70 934 aa12.73□□□□□ -0.37
USP6NL-206ENST00000609853 HOXD8P13378 290 aaPredicted RBP12.72□□□□□ -0.37
USP6NL-206ENST00000609853 MMP8P22894 467 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 EIF4BP23588 611 aaKnown RBP12.72□□□□□ -0.37
USP6NL-206ENST00000609853 CDH5P33151 784 aaPredicted RBP12.72□□□□□ -0.37
USP6NL-206ENST00000609853 ACTN2P35609 894 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 PTGIRP43119 386 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 CLCN3P51790 818 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 MYL6P60660 151 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 TFAMQ00059 246 aaKnown RBP12.72□□□□□ -0.37
USP6NL-206ENST00000609853 CDC42EP1Q00587 391 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 MAMLD1Q13495 774 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 ZNF699Q32M78 642 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 SEZ6Q53EL9 994 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 EMC10Q5UCC4 262 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 CCDC137Q6PK04 289 aaKnown RBP12.72□□□□□ -0.37
USP6NL-206ENST00000609853 RUFY4Q6ZNE9 571 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 SYDE1Q6ZW31 735 aaPredicted RBP12.72□□□□□ -0.37
USP6NL-206ENST00000609853 RHOT1Q8IXI2 618 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 TMEM35BQ8NCS4 154 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 TRAPPC12Q8WVT3 735 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 PIK3R5Q8WYR1 880 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 ELMO3Q96BJ8 720 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 FAM212AQ96EL1 285 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 BTBD6Q96KE9 485 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 FAM84AQ96KN4 292 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 PARK7Q99497 189 aaKnown RBP12.72□□□□□ -0.37
USP6NL-206ENST00000609853 FMO2Q99518 471 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 CELF4Q9BZC1 486 aaKnown RBP12.72□□□□□ -0.37
USP6NL-206ENST00000609853 CDT1Q9H211 546 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 PLEKHA4Q9H4M7 779 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 IFT122Q9HBG6 1241 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 ERVK-5Q9HDB9 667 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 CISHQ9NSE2 258 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 SLC5A4Q9NY91 659 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 CHORDC1Q9UHD1 332 aaPredicted RBP12.72□□□□□ -0.37
USP6NL-206ENST00000609853 IP6K2Q9UHH9 426 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 CLEC11AQ9Y240 323 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 CEP83Q9Y592 693 aa12.72□□□□□ -0.37
USP6NL-206ENST00000609853 HMGB1P1B2RPK0 211 aaPredicted RBP12.71□□□□□ -0.37
USP6NL-206ENST00000609853 ATICP31939 592 aa12.71□□□□□ -0.37
USP6NL-206ENST00000609853 HSD17B3P37058 310 aa12.71□□□□□ -0.37
USP6NL-206ENST00000609853 COILP38432 576 aaPredicted RBP12.71□□□□□ -0.37
USP6NL-206ENST00000609853 CETN2P41208 172 aa12.71□□□□□ -0.37
USP6NL-206ENST00000609853 EIF3BP55884 814 aaKnown RBP12.71□□□□□ -0.37
USP6NL-206ENST00000609853 GRB14Q14449 540 aa12.71□□□□□ -0.37
USP6NL-206ENST00000609853 TMC3Q7Z5M5 1100 aa12.71□□□□□ -0.37
USP6NL-206ENST00000609853 DDX42Q86XP3 938 aaKnown RBP eCLIP12.71□□□□□ -0.37
USP6NL-206ENST00000609853 NT5DC4Q86YG4 428 aa12.71□□□□□ -0.37
USP6NL-206ENST00000609853 THNSL1Q8IYQ7 743 aa12.71□□□□□ -0.37
USP6NL-206ENST00000609853 TTC39CQ8N584 583 aa12.71□□□□□ -0.37
USP6NL-206ENST00000609853 KATNBL1Q9H079 304 aa12.71□□□□□ -0.37
USP6NL-206ENST00000609853 XYLT2Q9H1B5 865 aa12.71□□□□□ -0.37
USP6NL-206ENST00000609853 ABHD16BQ9H3Z7 469 aa12.71□□□□□ -0.37
USP6NL-206ENST00000609853 UMODL1Q5DID0 1318 aa12.71□□□□□ -0.37
USP6NL-206ENST00000609853 PASKQ96RG2 1323 aa12.71□□□□□ -0.37
USP6NL-206ENST00000609853 MED7O43513 233 aa12.71□□□□□ -0.38
USP6NL-206ENST00000609853 SHOX2O60902 331 aaPredicted RBP12.71□□□□□ -0.38
USP6NL-206ENST00000609853 PPFIA2O75334 1257 aa12.71□□□□□ -0.38
USP6NL-206ENST00000609853 IVLP07476 585 aa12.71□□□□□ -0.38
USP6NL-206ENST00000609853 PAEPP09466 180 aa12.71□□□□□ -0.38
USP6NL-206ENST00000609853 P4HA1P13674 534 aa12.71□□□□□ -0.38
USP6NL-206ENST00000609853 SIX1Q15475 284 aaPredicted RBP12.71□□□□□ -0.38
USP6NL-206ENST00000609853 FAM110CQ1W6H9 321 aa12.71□□□□□ -0.38
USP6NL-206ENST00000609853 DUSP28Q4G0W2 176 aa12.71□□□□□ -0.38
USP6NL-206ENST00000609853 IQSEC1Q6DN90 963 aa12.71□□□□□ -0.38
USP6NL-206ENST00000609853 APBB1IPQ7Z5R6 666 aaPredicted RBP12.71□□□□□ -0.38
USP6NL-206ENST00000609853 ADAT2Q7Z6V5 191 aaKnown RBP12.71□□□□□ -0.38
USP6NL-206ENST00000609853 DPP9Q86TI2 863 aa12.71□□□□□ -0.38
USP6NL-206ENST00000609853 ZNF410Q86VK4 478 aa12.71□□□□□ -0.38
USP6NL-206ENST00000609853 KATNAL2Q8IYT4 538 aa12.71□□□□□ -0.38
USP6NL-206ENST00000609853 FEZF2Q8TBJ5 459 aa12.71□□□□□ -0.38
USP6NL-206ENST00000609853 GRK7Q8WTQ7 553 aa12.71□□□□□ -0.38
USP6NL-206ENST00000609853 AFG1LQ8WV93 481 aa12.71□□□□□ -0.38
USP6NL-206ENST00000609853 BRI3BPQ8WY22 251 aa12.71□□□□□ -0.38
USP6NL-206ENST00000609853 C11orf70Q9BRQ4 267 aa12.71□□□□□ -0.38
USP6NL-206ENST00000609853 TRIM51Q9BSJ1 452 aa12.71□□□□□ -0.38
USP6NL-206ENST00000609853 C16orf70Q9BSU1 422 aa12.71□□□□□ -0.38
USP6NL-206ENST00000609853 ZMYND15Q9H091 742 aa12.71□□□□□ -0.38
USP6NL-206ENST00000609853 LHX5Q9H2C1 402 aa12.71□□□□□ -0.38
USP6NL-206ENST00000609853 VRTNQ9H8Y1 702 aa12.71□□□□□ -0.38
USP6NL-206ENST00000609853 ZDHHC18Q9NUE0 388 aa12.71□□□□□ -0.38
USP6NL-206ENST00000609853 MTRF1LQ9UGC7 380 aaKnown RBP12.71□□□□□ -0.38
USP6NL-206ENST00000609853 PRDM4Q9UKN5 801 aa12.71□□□□□ -0.38
USP6NL-206ENST00000609853 STRIP2Q9ULQ0 834 aa12.71□□□□□ -0.38
USP6NL-206ENST00000609853 PLAAQ9Y263 795 aa12.71□□□□□ -0.38
USP6NL-206ENST00000609853 ZNF236Q9UL36 1845 aa12.7□□□□□ -0.38
USP6NL-206ENST00000609853 H3BRB1 525 aa12.7□□□□□ -0.38
USP6NL-206ENST00000609853 TLR3O15455 904 aaKnown RBP12.7□□□□□ -0.38
USP6NL-206ENST00000609853 SNAI1O95863 264 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms