RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 IL31Q6EBC2 164 aa17.26■□□□□ 0.35
HDDC2-203ENST00000608284 LONP2Q86WA8 852 aa17.26■□□□□ 0.35
HDDC2-203ENST00000608284 ZNF687Q8N1G0 1237 aa17.26■□□□□ 0.35
HDDC2-203ENST00000608284 CEP120Q8N960 986 aa17.26■□□□□ 0.35
HDDC2-203ENST00000608284 ZMAT2Q96NC0 199 aaKnown RBP17.26■□□□□ 0.35
HDDC2-203ENST00000608284 FOXP1Q9H334 677 aaPredicted RBP17.26■□□□□ 0.35
HDDC2-203ENST00000608284 PTPRHQ9HD43 1115 aa17.26■□□□□ 0.35
HDDC2-203ENST00000608284 SEMA4GQ9NTN9 838 aa17.26■□□□□ 0.35
HDDC2-203ENST00000608284 CEP72Q9P209 647 aa17.26■□□□□ 0.35
HDDC2-203ENST00000608284 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.26■□□□□ 0.35
HDDC2-203ENST00000608284 CHURC1-FNTBB4DL54 471 aa17.25■□□□□ 0.35
HDDC2-203ENST00000608284 ADRB1P08588 477 aa17.25■□□□□ 0.35
HDDC2-203ENST00000608284 TDGF1P13385 188 aa17.25■□□□□ 0.35
HDDC2-203ENST00000608284 GJA1P17302 382 aa17.25■□□□□ 0.35
HDDC2-203ENST00000608284 TRAPPC10P48553 1259 aa17.25■□□□□ 0.35
HDDC2-203ENST00000608284 FNTBP49356 437 aa17.25■□□□□ 0.35
HDDC2-203ENST00000608284 NEK4P51957 841 aa17.25■□□□□ 0.35
HDDC2-203ENST00000608284 SATB1Q01826 763 aa17.25■□□□□ 0.35
HDDC2-203ENST00000608284 PTPAQ15257 358 aa17.25■□□□□ 0.35
HDDC2-203ENST00000608284 ARHGAP15Q53QZ3 475 aa17.25■□□□□ 0.35
HDDC2-203ENST00000608284 SNX29Q8TEQ0 813 aa17.25■□□□□ 0.35
HDDC2-203ENST00000608284 C18orf25Q96B23 403 aaPredicted RBP17.25■□□□□ 0.35
HDDC2-203ENST00000608284 TIPINQ9BVW5 301 aa17.25■□□□□ 0.35
HDDC2-203ENST00000608284 F5P12259 2224 aa17.25■□□□□ 0.35
HDDC2-203ENST00000608284 SHISA7A6NL88 538 aa17.24■□□□□ 0.35
HDDC2-203ENST00000608284 XPOTO43592 962 aaKnown RBP17.24■□□□□ 0.35
HDDC2-203ENST00000608284 HIP1RO75146 1068 aa17.24■□□□□ 0.35
HDDC2-203ENST00000608284 TOM1L1O75674 476 aa17.24■□□□□ 0.35
HDDC2-203ENST00000608284 EPHA5P54756 1037 aa17.24■□□□□ 0.35
HDDC2-203ENST00000608284 PTGDRQ13258 359 aa17.24■□□□□ 0.35
HDDC2-203ENST00000608284 HEATR6Q6AI08 1181 aaKnown RBP17.24■□□□□ 0.35
HDDC2-203ENST00000608284 ARMCX5Q6P1M9 558 aa17.24■□□□□ 0.35
HDDC2-203ENST00000608284 POTEHQ6S545 545 aa17.24■□□□□ 0.35
HDDC2-203ENST00000608284 DSTYKQ6XUX3 929 aa17.24■□□□□ 0.35
HDDC2-203ENST00000608284 RNF19BQ6ZMZ0 732 aa17.24■□□□□ 0.35
HDDC2-203ENST00000608284 PRR23CQ6ZRP0 262 aa17.24■□□□□ 0.35
HDDC2-203ENST00000608284 RALGPS2Q86X27 583 aaPredicted RBP17.24■□□□□ 0.35
HDDC2-203ENST00000608284 PLEKHA5Q9HAU0 1116 aa17.24■□□□□ 0.35
HDDC2-203ENST00000608284 THG1LQ9NWX6 298 aaKnown RBP17.24■□□□□ 0.35
HDDC2-203ENST00000608284 ANKFY1Q9P2R3 1169 aa17.24■□□□□ 0.35
HDDC2-203ENST00000608284 ASB3Q9Y575 518 aa17.24■□□□□ 0.35
HDDC2-203ENST00000608284 A0A1W2PRU2 124 aa17.23■□□□□ 0.35
HDDC2-203ENST00000608284 OR6C75A6NL08 312 aa17.23■□□□□ 0.35
HDDC2-203ENST00000608284 CLDN3O15551 220 aa17.23■□□□□ 0.35
HDDC2-203ENST00000608284 HRO43593 1189 aa17.23■□□□□ 0.35
HDDC2-203ENST00000608284 NOLC1Q14978 699 aaKnown RBP eCLIP17.23■□□□□ 0.35
HDDC2-203ENST00000608284 TAF12Q16514 161 aa17.23■□□□□ 0.35
HDDC2-203ENST00000608284 ARHGAP29Q52LW3 1261 aa17.23■□□□□ 0.35
HDDC2-203ENST00000608284 ITIH5Q86UX2 942 aa17.23■□□□□ 0.35
HDDC2-203ENST00000608284 SYNPOQ8N3V7 929 aa17.23■□□□□ 0.35
HDDC2-203ENST00000608284 FAM184AQ8NB25 1140 aa17.23■□□□□ 0.35
HDDC2-203ENST00000608284 ARHGAP28Q9P2N2 729 aa17.23■□□□□ 0.35
HDDC2-203ENST00000608284 YIPF1Q9Y548 306 aa17.23■□□□□ 0.35
HDDC2-203ENST00000608284 COL4A3Q01955 1670 aa17.23■□□□□ 0.35
HDDC2-203ENST00000608284 SLC38A8A6NNN8 435 aa17.22■□□□□ 0.35
HDDC2-203ENST00000608284 SLC16A4O15374 487 aa17.22■□□□□ 0.35
HDDC2-203ENST00000608284 MOSPD3O75425 235 aa17.22■□□□□ 0.35
HDDC2-203ENST00000608284 OAZ2O95190 189 aa17.22■□□□□ 0.35
HDDC2-203ENST00000608284 PAPSS2O95340 614 aaPredicted RBP17.22■□□□□ 0.35
HDDC2-203ENST00000608284 LARGE1O95461 756 aa17.22■□□□□ 0.35
HDDC2-203ENST00000608284 PROZP22891 400 aa17.22■□□□□ 0.35
HDDC2-203ENST00000608284 PLCB2Q00722 1185 aa17.22■□□□□ 0.35
HDDC2-203ENST00000608284 DUSP4Q13115 394 aa17.22■□□□□ 0.35
HDDC2-203ENST00000608284 ECM1Q16610 540 aa17.22■□□□□ 0.35
HDDC2-203ENST00000608284 KYAT1Q16773 422 aa17.22■□□□□ 0.35
HDDC2-203ENST00000608284 AASDHQ4L235 1098 aaPredicted RBP17.22■□□□□ 0.35
HDDC2-203ENST00000608284 ARID3BQ8IVW6 561 aaPredicted RBP17.22■□□□□ 0.35
HDDC2-203ENST00000608284 C12orf50Q8NA57 414 aaPredicted RBP17.22■□□□□ 0.35
HDDC2-203ENST00000608284 SHKBP1Q8TBC3 707 aa17.22■□□□□ 0.35
HDDC2-203ENST00000608284 BICD1Q96G01 975 aa17.22■□□□□ 0.35
HDDC2-203ENST00000608284 PGLYRP2Q96PD5 576 aa17.22■□□□□ 0.35
HDDC2-203ENST00000608284 GCNAQ96QF7 691 aa17.22■□□□□ 0.35
HDDC2-203ENST00000608284 ATXN3LQ9H3M9 355 aa17.22■□□□□ 0.35
HDDC2-203ENST00000608284 PATJQ8NI35 1801 aa17.21■□□□□ 0.35
HDDC2-203ENST00000608284 VWA8A3KMH1 1905 aa17.21■□□□□ 0.35
HDDC2-203ENST00000608284 E9PMD0 336 aa17.21■□□□□ 0.35
HDDC2-203ENST00000608284 SPECC1L-ADORA2AF8WAN1 911 aa17.21■□□□□ 0.35
HDDC2-203ENST00000608284 H0YCG3 227 aa17.21■□□□□ 0.35
HDDC2-203ENST00000608284 CLTAP09496 248 aa17.21■□□□□ 0.35
HDDC2-203ENST00000608284 PAX3P23760 479 aa17.21■□□□□ 0.35
HDDC2-203ENST00000608284 FCHO2Q0JRZ9 810 aa17.21■□□□□ 0.35
HDDC2-203ENST00000608284 ZRSR1Q15695 479 aaKnown RBP17.21■□□□□ 0.35
HDDC2-203ENST00000608284 SLC10A6Q3KNW5 377 aa17.21■□□□□ 0.35
HDDC2-203ENST00000608284 ZPBP2Q6X784 338 aa17.21■□□□□ 0.35
HDDC2-203ENST00000608284 KIF12Q96FN5 646 aa17.21■□□□□ 0.35
HDDC2-203ENST00000608284 LLPHQ9BRT6 129 aaKnown RBP17.21■□□□□ 0.35
HDDC2-203ENST00000608284 NTPCRQ9BSD7 190 aaKnown RBP17.21■□□□□ 0.35
HDDC2-203ENST00000608284 UBQLN1Q9UMX0 589 aaKnown RBP17.21■□□□□ 0.35
HDDC2-203ENST00000608284 TIMM13Q9Y5L4 95 aaPredicted RBP17.21■□□□□ 0.35
HDDC2-203ENST00000608284 NOTCH4Q99466 2003 aa17.21■□□□□ 0.35
HDDC2-203ENST00000608284 MYBPHLA2RUH7 354 aa17.2■□□□□ 0.34
HDDC2-203ENST00000608284 SFI1A8K8P3 1242 aa17.2■□□□□ 0.34
HDDC2-203ENST00000608284 M0QZQ0 153 aa17.2■□□□□ 0.34
HDDC2-203ENST00000608284 LAD1O00515 517 aa17.2■□□□□ 0.34
HDDC2-203ENST00000608284 CYP3A5P20815 502 aa17.2■□□□□ 0.34
HDDC2-203ENST00000608284 AMPD2Q01433 879 aa17.2■□□□□ 0.34
HDDC2-203ENST00000608284 PPP2R3AQ06190 1150 aa17.2■□□□□ 0.34
HDDC2-203ENST00000608284 GPR17Q13304 367 aa17.2■□□□□ 0.34
HDDC2-203ENST00000608284 MYBPC2Q14324 1141 aa17.2■□□□□ 0.34
HDDC2-203ENST00000608284 VEPH1Q14D04 833 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms