RNA–Protein interactions for RNA: ENST00000607559.1

TPM2-208, Transcript of tropomyosin 2, human

TSL 2

Gene TPM2, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM2-208	ENST00000607559	CRELD2	Q6UXH1	353 aa	Predicted RBP	11.65	□□□□□ -0.54
TPM2-208	ENST00000607559	NT5DC4	Q86YG4	428 aa		11.65	□□□□□ -0.54
TPM2-208	ENST00000607559	RASSF8	Q8NHQ8	419 aa		11.65	□□□□□ -0.54
TPM2-208	ENST00000607559	BICD1	Q96G01	975 aa		11.65	□□□□□ -0.54
TPM2-208	ENST00000607559	MSTO1	Q9BUK6	570 aa		11.65	□□□□□ -0.54
TPM2-208	ENST00000607559	RPF1	Q9H9Y2	349 aa	Known RBP	11.65	□□□□□ -0.54
TPM2-208	ENST00000607559	WNT16	Q9UBV4	365 aa		11.65	□□□□□ -0.54
TPM2-208	ENST00000607559	FBXL5	Q9UKA1	691 aa		11.65	□□□□□ -0.54
TPM2-208	ENST00000607559	NUB1	Q9Y5A7	615 aa		11.65	□□□□□ -0.54
TPM2-208	ENST00000607559	USP34	Q70CQ2	3546 aa		11.65	□□□□□ -0.54
TPM2-208	ENST00000607559	PLXNA3	P51805	1871 aa		11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	EP300	Q09472	2414 aa	Predicted RBP	11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	GVINP1	Q7Z2Y8	2422 aa		11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	WDR27	A2RRH5	827 aa		11.64	□□□□□ -0.55
TPM2-208	ENST00000607559		I3L4J1	428 aa		11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	CUTA	O60888	179 aa		11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	CYP11A1	P05108	521 aa		11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	ZSCAN22	P10073	491 aa	Predicted RBP	11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	TYMP	P19971	482 aa		11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	FSHR	P23945	695 aa		11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	VCP	P55072	806 aa	Known RBP	11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	LILRA4	P59901	499 aa		11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	CEBPZ	Q03701	1054 aa	Known RBP	11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	TCF15	Q12870	199 aa		11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	HTR4	Q13639	388 aa		11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	ZBTB41	Q5SVQ8	909 aa		11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	L1TD1	Q5T7N2	865 aa	Known RBP	11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	DYM	Q7RTS9	669 aa		11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	SFR1	Q86XK3	245 aa		11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	GLYCTK	Q8IVS8	523 aa		11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	SLC7A14	Q8TBB6	771 aa		11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	LRRC27	Q9C0I9	530 aa		11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	TNMD	Q9H2S6	317 aa		11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	PIDD1	Q9HB75	910 aa		11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	SLC2A4RG	Q9NR83	387 aa		11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	PLSCR2	Q9NRY7	297 aa		11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	DNMT3B	Q9UBC3	853 aa	Known RBP	11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	HSFX1	Q9UBD0	423 aa		11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	TUBGCP4	Q9UGJ1	667 aa		11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	AFF4	Q9UHB7	1163 aa	Known RBP	11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	RCOR1	Q9UKL0	485 aa		11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	AGO2	Q9UKV8	859 aa	Known RBP	11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	CDH7	Q9ULB5	785 aa		11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	PCDHGA10	Q9Y5H3	936 aa		11.64	□□□□□ -0.55
TPM2-208	ENST00000607559	KMT2E	Q8IZD2	1858 aa		11.63	□□□□□ -0.55
TPM2-208	ENST00000607559	VWA8	A3KMH1	1905 aa		11.63	□□□□□ -0.55
TPM2-208	ENST00000607559	CFAP54	Q96N23	3096 aa		11.63	□□□□□ -0.55
TPM2-208	ENST00000607559	ARHGAP33	O14559	1287 aa		11.63	□□□□□ -0.55
TPM2-208	ENST00000607559	LDHA	P00338	332 aa	Known RBP	11.63	□□□□□ -0.55
TPM2-208	ENST00000607559	HARS	P12081	509 aa	Known RBP	11.63	□□□□□ -0.55
TPM2-208	ENST00000607559	GART	P22102	1010 aa		11.63	□□□□□ -0.55
TPM2-208	ENST00000607559	STAT6	P42226	847 aa		11.63	□□□□□ -0.55
TPM2-208	ENST00000607559	EPHA5	P54756	1037 aa		11.63	□□□□□ -0.55
TPM2-208	ENST00000607559	EHHADH	Q08426	723 aa		11.63	□□□□□ -0.55
TPM2-208	ENST00000607559	GPR17	Q13304	367 aa		11.63	□□□□□ -0.55
TPM2-208	ENST00000607559	STK38	Q15208	465 aa		11.63	□□□□□ -0.55
TPM2-208	ENST00000607559	ADAL	Q6DHV7	355 aa		11.63	□□□□□ -0.55
TPM2-208	ENST00000607559	JADE1	Q6IE81	842 aa		11.63	□□□□□ -0.55
TPM2-208	ENST00000607559	ZNF280D	Q6N043	979 aa		11.63	□□□□□ -0.55
TPM2-208	ENST00000607559	SHC4	Q6S5L8	630 aa		11.63	□□□□□ -0.55
TPM2-208	ENST00000607559	GRASP	Q7Z6J2	395 aa	Predicted RBP	11.63	□□□□□ -0.55
TPM2-208	ENST00000607559	KCNG4	Q8TDN1	519 aa		11.63	□□□□□ -0.55
TPM2-208	ENST00000607559	ZDHHC16	Q969W1	377 aa		11.63	□□□□□ -0.55
TPM2-208	ENST00000607559	BORCS6	Q96GS4	357 aa		11.63	□□□□□ -0.55
TPM2-208	ENST00000607559	ACCS	Q96QU6	501 aa		11.63	□□□□□ -0.55
TPM2-208	ENST00000607559	MRPL44	Q9H9J2	332 aa	Known RBP	11.63	□□□□□ -0.55
TPM2-208	ENST00000607559	GDE1	Q9NZC3	331 aa		11.63	□□□□□ -0.55
TPM2-208	ENST00000607559	TFIP11	Q9UBB9	837 aa	Known RBP	11.63	□□□□□ -0.55
TPM2-208	ENST00000607559	EXOC7	Q9UPT5	735 aa		11.63	□□□□□ -0.55
TPM2-208	ENST00000607559	TRIP11	Q15643	1979 aa		11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	C2orf16	Q68DN1	1984 aa		11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	OR6C75	A6NL08	312 aa		11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	TISP43	B9A030	160 aa		11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	KIAA0391	O15091	583 aa	Known RBP	11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	IL18RAP	O95256	599 aa		11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	SEC24A	O95486	1093 aa		11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	F13A1	P00488	732 aa		11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	PDGFB	P01127	241 aa	Predicted RBP	11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	SRF	P11831	508 aa		11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	NPR3	P17342	541 aa		11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	PTPN2	P17706	415 aa		11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	GBP2	P32456	591 aa	Predicted RBP	11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	MCM4	P33991	863 aa		11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	MATR3	P43243	847 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	AMPD3	Q01432	767 aa		11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	KCNA1	Q09470	495 aa		11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	MYBPC2	Q14324	1141 aa		11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	CTXN3	Q4LDR2	81 aa		11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	C9orf57	Q5W0N0	161 aa		11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	IQUB	Q8NA54	791 aa		11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	CXorf38	Q8TB03	319 aa		11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	FGF13	Q92913	245 aa		11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	C7orf25	Q9BPX7	421 aa		11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	PANK2	Q9BZ23	570 aa		11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	TRIM9	Q9C026	710 aa		11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	MFSD1	Q9H3U5	465 aa		11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	SMOC2	Q9H3U7	446 aa		11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	ZHX3	Q9H4I2	956 aa		11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	TMEM206	Q9H813	350 aa		11.62	□□□□□ -0.55
TPM2-208	ENST00000607559	MAGEF1	Q9HAY2	307 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms