RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 EDRF1Q3B7T1 1238 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 TMEM63BQ5T3F8 832 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 FUT10Q6P4F1 479 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 WDR49Q8IV35 697 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 SYT15Q9BQS2 421 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 CORO1BQ9BR76 489 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 THAP9Q9H5L6 903 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 NSUN3Q9H649 340 aaKnown RBP5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 DYRK4Q9NR20 520 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 FANCLQ9NW38 375 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 DDX43Q9NXZ2 648 aaKnown RBP5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 NAGPAQ9UK23 515 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 NR2E1Q9Y466 385 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 TIMM13Q9Y5L4 95 aaPredicted RBP5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 POLR2AP24928 1970 aaKnown RBP5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 LACTBL1A8MY62 500 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 SLC16A3O15427 465 aaKnown RBP5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 MAP3K13O43283 966 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 BNIP3LO60238 219 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 TRIM49P0CI25 452 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 TRIM49CP0CI26 452 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 CSH1P0DML2 217 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 CSH2P0DML3 217 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 BMPR1AP36894 532 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 HARS2P49590 506 aaKnown RBP5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 DNA2P51530 1060 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 FAAP100Q0VG06 881 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 KRT81Q14533 505 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 LHX8Q68G74 356 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 FRMD5Q7Z6J6 570 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 HOOK3Q86VS8 718 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 FAM228AQ86W67 206 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 MAP7D3Q8IWC1 876 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 BRSK2Q8IWQ3 736 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 CGRRF1Q99675 332 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 ACO2Q99798 780 aaKnown RBP5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 BRD9Q9H8M2 597 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 LZTFL1Q9NQ48 299 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 AGPAT3Q9NRZ7 376 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 CWC15Q9P013 229 aaKnown RBP5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 VAV3Q9UKW4 847 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 HPCAL4Q9UM19 191 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 COL4A5P29400 1685 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 BAZ2AQ9UIF9 1905 aaKnown RBP5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 KPNA7A9QM74 516 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 IKBKBO14920 756 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 POLR3GO15318 223 aaPredicted RBP5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 AP1G2O75843 785 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 FGF18O76093 207 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 CASP1P29466 404 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 NRIP1P48552 1158 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 TOB1P50616 345 aaPredicted RBP5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 IRX5P78411 483 aaPredicted RBP5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 UBE3AQ05086 875 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 KIF5AQ12840 1032 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 MYBPC2Q14324 1141 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 EARS2Q5JPH6 523 aaKnown RBP5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 C10orf120Q5SQS8 335 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 SPECC1LQ69YQ0 1117 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 FMR1NBQ8N0W7 255 aaPredicted RBP5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 PGLYRP2Q96PD5 576 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 NXF3Q9H4D5 531 aaKnown RBP5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 ELAC1Q9H777 363 aaKnown RBP5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 ARFGAP3Q9NP61 516 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 BCCIPQ9P287 314 aaKnown RBP eCLIP5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 KIAA1257Q9ULG3 409 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 COMMD10Q9Y6G5 202 aa5.49□□□□□ -1.53
SCARNA15-201ENST00000607520 NRXN2Q9P2S2 1712 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 TRIOBPQ9H2D6 2365 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 ADGRA3Q8IWK6 1321 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 TTLL13PA6NNM8 815 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 GJB5O95377 273 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 ABCB4P21439 1286 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 ACADSBP45954 432 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 NOP14P78316 857 aaKnown RBP5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 DNAJC24Q6P3W2 148 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 SARM1Q6SZW1 724 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 LEKR1Q6ZMV7 388 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 C1orf186Q6ZWK4 172 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 USP49Q70CQ1 688 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 TRAPPC11Q7Z392 1133 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 MAP4K3Q8IVH8 894 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 NDUFAF2Q8N183 169 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 EHBP1Q8NDI1 1231 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 NECTIN4Q96NY8 510 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 CDK5RAP1Q96SZ6 601 aaKnown RBP5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 MTMR12Q9C0I1 747 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 GOLPH3LQ9H4A5 285 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 FBXO44Q9H4M3 255 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 CYP3A43Q9HB55 503 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 TMEM8AQ9HCN3 771 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 RAB20Q9NX57 234 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 OGFRQ9NZT2 677 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 MYO1AQ9UBC5 1043 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 BZW2Q9Y6E2 419 aaKnown RBP5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 NEMP1O14524 444 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 RHOBTB3O94955 611 aa5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 RTN3O95197 1032 aaPredicted RBP5.48□□□□□ -1.53
SCARNA15-201ENST00000607520 CDC25CP30307 473 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms