RNA–Protein interactions for RNA: ENST00000607055.1

NECAB3-221, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 4

Gene NECAB3, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-221ENST00000607055 LRCH3Q96II8 777 aa23.26■■□□□ 1.31
NECAB3-221ENST00000607055 GPR62Q9BZJ7 368 aa23.26■■□□□ 1.31
NECAB3-221ENST00000607055 IMPG2Q9BZV3 1241 aa23.26■■□□□ 1.31
NECAB3-221ENST00000607055 XYLT2Q9H1B5 865 aa23.26■■□□□ 1.31
NECAB3-221ENST00000607055 ZNF576Q9H609 170 aa23.26■■□□□ 1.31
NECAB3-221ENST00000607055 ALG13Q9NP73 1137 aaKnown RBP23.26■■□□□ 1.31
NECAB3-221ENST00000607055 COQ4Q9Y3A0 265 aa23.26■■□□□ 1.31
NECAB3-221ENST00000607055 LRRC10BA6NIK2 292 aa23.25■■□□□ 1.31
NECAB3-221ENST00000607055 KPNA7A9QM74 516 aa23.25■■□□□ 1.31
NECAB3-221ENST00000607055 TRAPPC3O43617 180 aa23.25■■□□□ 1.31
NECAB3-221ENST00000607055 SERPINC1P01008 464 aa23.25■■□□□ 1.31
NECAB3-221ENST00000607055 GPM6BQ13491 265 aa23.25■■□□□ 1.31
NECAB3-221ENST00000607055 CCDC150Q8NCX0 1101 aa23.25■■□□□ 1.31
NECAB3-221ENST00000607055 SENP8Q96LD8 212 aa23.25■■□□□ 1.31
NECAB3-221ENST00000607055 CRACR2AQ9BSW2 395 aa23.25■■□□□ 1.31
NECAB3-221ENST00000607055 VN1R3Q9BXE9 311 aa23.25■■□□□ 1.31
NECAB3-221ENST00000607055 STAU1O95793 577 aaKnown RBP23.24■■□□□ 1.31
NECAB3-221ENST00000607055 ASS1P00966 412 aaKnown RBP23.24■■□□□ 1.31
NECAB3-221ENST00000607055 PAX3P23760 479 aa23.24■■□□□ 1.31
NECAB3-221ENST00000607055 AARSP49588 968 aaKnown RBP eCLIP23.24■■□□□ 1.31
NECAB3-221ENST00000607055 FANCCQ00597 558 aa23.24■■□□□ 1.31
NECAB3-221ENST00000607055 ELAVL2Q12926 359 aaKnown RBP23.24■■□□□ 1.31
NECAB3-221ENST00000607055 WDR44Q5JSH3 913 aa23.24■■□□□ 1.31
NECAB3-221ENST00000607055 FKBP15Q5T1M5 1219 aa23.24■■□□□ 1.31
NECAB3-221ENST00000607055 FAM171A1Q5VUB5 890 aa23.24■■□□□ 1.31
NECAB3-221ENST00000607055 SPOPLQ6IQ16 392 aa23.24■■□□□ 1.31
NECAB3-221ENST00000607055 GBP6Q6ZN66 633 aa23.24■■□□□ 1.31
NECAB3-221ENST00000607055 TAS1R1Q7RTX1 841 aa23.24■■□□□ 1.31
NECAB3-221ENST00000607055 DDX53Q86TM3 631 aaKnown RBP23.24■■□□□ 1.31
NECAB3-221ENST00000607055 TAF4BQ92750 862 aa23.24■■□□□ 1.31
NECAB3-221ENST00000607055 SUSD3Q96L08 255 aa23.24■■□□□ 1.31
NECAB3-221ENST00000607055 GCNT4Q9P109 453 aa23.24■■□□□ 1.31
NECAB3-221ENST00000607055 NXF1Q9UBU9 619 aaKnown RBP23.24■■□□□ 1.31
NECAB3-221ENST00000607055 PUF60Q9UHX1 559 aaKnown RBP23.24■■□□□ 1.31
NECAB3-221ENST00000607055 SNX9Q9Y5X1 595 aa23.24■■□□□ 1.31
NECAB3-221ENST00000607055 SCN1AP35498 2009 aa23.24■■□□□ 1.31
NECAB3-221ENST00000607055 EPOPA6NHQ4 379 aa23.23■■□□□ 1.31
NECAB3-221ENST00000607055 LGALS16A8MUM7 142 aa23.23■■□□□ 1.31
NECAB3-221ENST00000607055 H3BNC9 293 aa23.23■■□□□ 1.31
NECAB3-221ENST00000607055 CYB561D2O14569 222 aa23.23■■□□□ 1.31
NECAB3-221ENST00000607055 GRM6O15303 877 aa23.23■■□□□ 1.31
NECAB3-221ENST00000607055 CSPG5O95196 566 aa23.23■■□□□ 1.31
NECAB3-221ENST00000607055 NOP14P78316 857 aaKnown RBP23.23■■□□□ 1.31
NECAB3-221ENST00000607055 LRMPQ12912 555 aa23.23■■□□□ 1.31
NECAB3-221ENST00000607055 WDR72Q3MJ13 1102 aa23.23■■□□□ 1.31
NECAB3-221ENST00000607055 FILIP1LQ4L180 1135 aa23.23■■□□□ 1.31
NECAB3-221ENST00000607055 ZNF667Q5HYK9 610 aa23.23■■□□□ 1.31
NECAB3-221ENST00000607055 HABP4Q5JVS0 413 aaKnown RBP23.23■■□□□ 1.31
NECAB3-221ENST00000607055 CEP57Q86XR8 500 aa23.23■■□□□ 1.31
NECAB3-221ENST00000607055 EHBP1Q8NDI1 1231 aa23.23■■□□□ 1.31
NECAB3-221ENST00000607055 SPPL3Q8TCT6 385 aa23.23■■□□□ 1.31
NECAB3-221ENST00000607055 GDPD5Q8WTR4 605 aa23.23■■□□□ 1.31
NECAB3-221ENST00000607055 B3GALT6Q96L58 329 aa23.23■■□□□ 1.31
NECAB3-221ENST00000607055 INTS2Q9H0H0 1204 aaKnown RBP23.23■■□□□ 1.31
NECAB3-221ENST00000607055 POLIQ9UNA4 740 aa23.23■■□□□ 1.31
NECAB3-221ENST00000607055 TMEM265A0A087WTH1 108 aa23.22■■□□□ 1.31
NECAB3-221ENST00000607055 GTPBP10A4D1E9 387 aaKnown RBP23.22■■□□□ 1.31
NECAB3-221ENST00000607055 EFEMP2O95967 443 aa23.22■■□□□ 1.31
NECAB3-221ENST00000607055 SOD2P04179 222 aa23.22■■□□□ 1.31
NECAB3-221ENST00000607055 TNNC1P63316 161 aa23.22■■□□□ 1.31
NECAB3-221ENST00000607055 EXOC3L4Q17RC7 722 aa23.22■■□□□ 1.31
NECAB3-221ENST00000607055 RNF168Q8IYW5 571 aaPredicted RBP23.22■■□□□ 1.31
NECAB3-221ENST00000607055 VPS52Q8N1B4 723 aa23.22■■□□□ 1.31
NECAB3-221ENST00000607055 POF1BQ8WVV4 589 aa23.22■■□□□ 1.31
NECAB3-221ENST00000607055 HERC2P3Q9BVR0 1158 aa23.22■■□□□ 1.31
NECAB3-221ENST00000607055 TTYH1Q9H313 450 aaPredicted RBP23.22■■□□□ 1.31
NECAB3-221ENST00000607055 VRTNQ9H8Y1 702 aa23.22■■□□□ 1.31
NECAB3-221ENST00000607055 APOBEC3GQ9HC16 384 aaKnown RBP23.22■■□□□ 1.31
NECAB3-221ENST00000607055 GDAP2Q9NXN4 497 aa23.22■■□□□ 1.31
NECAB3-221ENST00000607055 PCDHB8Q9UN66 801 aa23.22■■□□□ 1.31
NECAB3-221ENST00000607055 LZTS1Q9Y250 596 aa23.22■■□□□ 1.31
NECAB3-221ENST00000607055 TIMM13Q9Y5L4 95 aaPredicted RBP23.22■■□□□ 1.31
NECAB3-221ENST00000607055 M0QZQ0 153 aa23.21■■□□□ 1.31
NECAB3-221ENST00000607055 RFXAPO00287 272 aa23.21■■□□□ 1.31
NECAB3-221ENST00000607055 ODC1P11926 461 aa23.21■■□□□ 1.31
NECAB3-221ENST00000607055 DNAJB1P25685 340 aa23.21■■□□□ 1.31
NECAB3-221ENST00000607055 TKTP29401 623 aaKnown RBP23.21■■□□□ 1.31
NECAB3-221ENST00000607055 UBXN1Q04323 297 aa23.21■■□□□ 1.31
NECAB3-221ENST00000607055 UBE3AQ05086 875 aa23.21■■□□□ 1.31
NECAB3-221ENST00000607055 SCARA5Q6ZMJ2 495 aa23.21■■□□□ 1.31
NECAB3-221ENST00000607055 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.21■■□□□ 1.31
NECAB3-221ENST00000607055 LMO3Q8TAP4 145 aa23.21■■□□□ 1.31
NECAB3-221ENST00000607055 NAP1L5Q96NT1 182 aaPredicted RBP23.21■■□□□ 1.31
NECAB3-221ENST00000607055 MMS19Q96T76 1030 aa23.21■■□□□ 1.31
NECAB3-221ENST00000607055 RTN4Q9NQC3 1192 aaKnown RBP23.21■■□□□ 1.31
NECAB3-221ENST00000607055 STK39Q9UEW8 545 aa23.21■■□□□ 1.31
NECAB3-221ENST00000607055 PLXNA4Q9HCM2 1894 aa23.2■■□□□ 1.3
NECAB3-221ENST00000607055 A0A1B0GTH6 734 aa23.2■■□□□ 1.3
NECAB3-221ENST00000607055 HUS1O60921 280 aa23.2■■□□□ 1.3
NECAB3-221ENST00000607055 SLC9A1P19634 815 aa23.2■■□□□ 1.3
NECAB3-221ENST00000607055 FGFR3P22607 806 aa23.2■■□□□ 1.3
NECAB3-221ENST00000607055 USP41Q3LFD5 358 aa23.2■■□□□ 1.3
NECAB3-221ENST00000607055 ZNF697Q5TEC3 545 aa23.2■■□□□ 1.3
NECAB3-221ENST00000607055 KIAA1841Q6NSI8 718 aa23.2■■□□□ 1.3
NECAB3-221ENST00000607055 TATDN2Q93075 761 aa23.2■■□□□ 1.3
NECAB3-221ENST00000607055 NT5C1BQ96P26 610 aa23.2■■□□□ 1.3
NECAB3-221ENST00000607055 TTPALQ9BTX7 342 aa23.2■■□□□ 1.3
NECAB3-221ENST00000607055 NIF3L1Q9GZT8 377 aa23.2■■□□□ 1.3
NECAB3-221ENST00000607055 IFNKQ9P0W0 207 aa23.2■■□□□ 1.3
NECAB3-221ENST00000607055 ARHGEF37A1IGU5 675 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms