RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 LRSAM1Q6UWE0 723 aa13.53□□□□□ -0.24
HLA-F-230ENST00000606273 ZNF852Q6ZMS4 543 aa13.53□□□□□ -0.24
HLA-F-230ENST00000606273 MTSS1LQ765P7 747 aa13.53□□□□□ -0.24
HLA-F-230ENST00000606273 KRT25Q7Z3Z0 450 aa13.53□□□□□ -0.24
HLA-F-230ENST00000606273 RNF168Q8IYW5 571 aaPredicted RBP13.53□□□□□ -0.24
HLA-F-230ENST00000606273 LENG9Q96B70 501 aa13.53□□□□□ -0.24
HLA-F-230ENST00000606273 HERC2P3Q9BVR0 1158 aa13.53□□□□□ -0.24
HLA-F-230ENST00000606273 FRYQ5TBA9 3013 aa13.52□□□□□ -0.24
HLA-F-230ENST00000606273 CIITAP33076 1130 aa13.52□□□□□ -0.25
HLA-F-230ENST00000606273 GLUD2P49448 558 aa13.52□□□□□ -0.25
HLA-F-230ENST00000606273 EPHA4P54764 986 aa13.52□□□□□ -0.25
HLA-F-230ENST00000606273 DSG1Q02413 1049 aa13.52□□□□□ -0.25
HLA-F-230ENST00000606273 TRIM29Q14134 588 aa13.52□□□□□ -0.25
HLA-F-230ENST00000606273 TEAD4Q15561 434 aa13.52□□□□□ -0.25
HLA-F-230ENST00000606273 TBCELQ5QJ74 424 aa13.52□□□□□ -0.25
HLA-F-230ENST00000606273 SAMD5Q5TGI4 173 aa13.52□□□□□ -0.25
HLA-F-230ENST00000606273 UNQ6494/PRO21346Q6UXR6 183 aa13.52□□□□□ -0.25
HLA-F-230ENST00000606273 AGMOQ6ZNB7 445 aa13.52□□□□□ -0.25
HLA-F-230ENST00000606273 TPRG1Q6ZUI0 275 aa13.52□□□□□ -0.25
HLA-F-230ENST00000606273 GRASPQ7Z6J2 395 aaPredicted RBP13.52□□□□□ -0.25
HLA-F-230ENST00000606273 URGCPQ8TCY9 931 aa13.52□□□□□ -0.25
HLA-F-230ENST00000606273 FGF13Q92913 245 aa13.52□□□□□ -0.25
HLA-F-230ENST00000606273 GJA10Q969M2 543 aa13.52□□□□□ -0.25
HLA-F-230ENST00000606273 SCLT1Q96NL6 688 aa13.52□□□□□ -0.25
HLA-F-230ENST00000606273 FAM193BQ96PV7 902 aaPredicted RBP13.52□□□□□ -0.25
HLA-F-230ENST00000606273 CHST7Q9NS84 486 aa13.52□□□□□ -0.25
HLA-F-230ENST00000606273 MARCH5Q9NX47 278 aa13.52□□□□□ -0.25
HLA-F-230ENST00000606273 KANSL3Q9P2N6 904 aa13.52□□□□□ -0.25
HLA-F-230ENST00000606273 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.52□□□□□ -0.25
HLA-F-230ENST00000606273 CCDC194A0A1B0GVG4 234 aa13.51□□□□□ -0.25
HLA-F-230ENST00000606273 ZNF76P36508 570 aa13.51□□□□□ -0.25
HLA-F-230ENST00000606273 NTHL1P78549 312 aa13.51□□□□□ -0.25
HLA-F-230ENST00000606273 PRR16Q569H4 304 aa13.51□□□□□ -0.25
HLA-F-230ENST00000606273 PLA2G4DQ86XP0 818 aa13.51□□□□□ -0.25
HLA-F-230ENST00000606273 SLC9A9Q8IVB4 645 aa13.51□□□□□ -0.25
HLA-F-230ENST00000606273 HSCBQ8IWL3 235 aa13.51□□□□□ -0.25
HLA-F-230ENST00000606273 PGBD4Q96DM1 585 aa13.51□□□□□ -0.25
HLA-F-230ENST00000606273 INTS4Q96HW7 963 aaKnown RBP13.51□□□□□ -0.25
HLA-F-230ENST00000606273 KXD1Q9BQD3 176 aa13.51□□□□□ -0.25
HLA-F-230ENST00000606273 GCOM2Q9BZD3 368 aaPredicted RBP13.51□□□□□ -0.25
HLA-F-230ENST00000606273 GABBR1Q9UBS5 961 aa13.51□□□□□ -0.25
HLA-F-230ENST00000606273 MRPS17Q9Y2R5 130 aaKnown RBP13.51□□□□□ -0.25
HLA-F-230ENST00000606273 PCDHB2Q9Y5E7 798 aa13.51□□□□□ -0.25
HLA-F-230ENST00000606273 GNB5O14775 395 aa13.5□□□□□ -0.25
HLA-F-230ENST00000606273 SLC37A4O43826 429 aa13.5□□□□□ -0.25
HLA-F-230ENST00000606273 POMCP01189 267 aa13.5□□□□□ -0.25
HLA-F-230ENST00000606273 NOS2P35228 1153 aa13.5□□□□□ -0.25
HLA-F-230ENST00000606273 DGKGP49619 791 aa13.5□□□□□ -0.25
HLA-F-230ENST00000606273 RAB27AP51159 221 aa13.5□□□□□ -0.25
HLA-F-230ENST00000606273 USP11P51784 963 aa13.5□□□□□ -0.25
HLA-F-230ENST00000606273 CDC42EP1Q00587 391 aa13.5□□□□□ -0.25
HLA-F-230ENST00000606273 DRP2Q13474 957 aa13.5□□□□□ -0.25
HLA-F-230ENST00000606273 PPP2R5DQ14738 602 aa13.5□□□□□ -0.25
HLA-F-230ENST00000606273 LARP1BQ659C4 914 aaKnown RBP13.5□□□□□ -0.25
HLA-F-230ENST00000606273 NIPA1Q7RTP0 329 aa13.5□□□□□ -0.25
HLA-F-230ENST00000606273 MRPL10Q7Z7H8 261 aaKnown RBP13.5□□□□□ -0.25
HLA-F-230ENST00000606273 MBOAT7Q96N66 472 aa13.5□□□□□ -0.25
HLA-F-230ENST00000606273 CHRDQ9H2X0 955 aa13.5□□□□□ -0.25
HLA-F-230ENST00000606273 AVENQ9NQS1 362 aaPredicted RBP13.5□□□□□ -0.25
HLA-F-230ENST00000606273 HEBP1Q9NRV9 189 aa13.5□□□□□ -0.25
HLA-F-230ENST00000606273 NRBP2Q9NSY0 501 aa13.5□□□□□ -0.25
HLA-F-230ENST00000606273 PIN4Q9Y237 131 aaKnown RBP13.5□□□□□ -0.25
HLA-F-230ENST00000606273 PRG3Q9Y2Y8 225 aaPredicted RBP13.5□□□□□ -0.25
HLA-F-230ENST00000606273 PCDHA10Q9Y5I2 948 aa13.5□□□□□ -0.25
HLA-F-230ENST00000606273 ZZEF1O43149 2961 aa13.49□□□□□ -0.25
HLA-F-230ENST00000606273 CYP3A7-CYP3A51PA0A087WV96 503 aa13.49□□□□□ -0.25
HLA-F-230ENST00000606273 IPO5O00410 1097 aaKnown RBP13.49□□□□□ -0.25
HLA-F-230ENST00000606273 MSH4O15457 936 aa13.49□□□□□ -0.25
HLA-F-230ENST00000606273 KCNK5O95279 499 aa13.49□□□□□ -0.25
HLA-F-230ENST00000606273 PSAPP07602 524 aa13.49□□□□□ -0.25
HLA-F-230ENST00000606273 CYP3A7P24462 503 aa13.49□□□□□ -0.25
HLA-F-230ENST00000606273 U2AF2P26368 475 aaKnown RBP eCLIP13.49□□□□□ -0.25
HLA-F-230ENST00000606273 PCBP4P57723 403 aaKnown RBP13.49□□□□□ -0.25
HLA-F-230ENST00000606273 ZNF746Q6NUN9 644 aaPredicted RBP13.49□□□□□ -0.25
HLA-F-230ENST00000606273 CHSY3Q70JA7 882 aa13.49□□□□□ -0.25
HLA-F-230ENST00000606273 NEK8Q86SG6 692 aa13.49□□□□□ -0.25
HLA-F-230ENST00000606273 SMAP1Q8IYB5 467 aaPredicted RBP13.49□□□□□ -0.25
HLA-F-230ENST00000606273 COLGALT2Q8IYK4 626 aa13.49□□□□□ -0.25
HLA-F-230ENST00000606273 FAM167AQ96KS9 214 aa13.49□□□□□ -0.25
HLA-F-230ENST00000606273 B3GALT6Q96L58 329 aa13.49□□□□□ -0.25
HLA-F-230ENST00000606273 FOXP1Q9H334 677 aaPredicted RBP13.49□□□□□ -0.25
HLA-F-230ENST00000606273 BRMS1Q9HCU9 246 aa13.49□□□□□ -0.25
HLA-F-230ENST00000606273 RXFP3Q9NSD7 469 aa13.49□□□□□ -0.25
HLA-F-230ENST00000606273 MARK1Q9P0L2 795 aa13.49□□□□□ -0.25
HLA-F-230ENST00000606273 FNIP2Q9P278 1114 aa13.49□□□□□ -0.25
HLA-F-230ENST00000606273 ZNF232Q9UNY5 417 aa13.49□□□□□ -0.25
HLA-F-230ENST00000606273 PATJQ8NI35 1801 aa13.48□□□□□ -0.25
HLA-F-230ENST00000606273 A0A087WZ62 844 aa13.48□□□□□ -0.25
HLA-F-230ENST00000606273 SRRM3A6NNA2 597 aaPredicted RBP13.48□□□□□ -0.25
HLA-F-230ENST00000606273 PIK3R2O00459 728 aa13.48□□□□□ -0.25
HLA-F-230ENST00000606273 EFSO43281 561 aa13.48□□□□□ -0.25
HLA-F-230ENST00000606273 SYT1P21579 422 aa13.48□□□□□ -0.25
HLA-F-230ENST00000606273 SFPQP23246 707 aaKnown RBP eCLIP13.48□□□□□ -0.25
HLA-F-230ENST00000606273 CNR2P34972 360 aa13.48□□□□□ -0.25
HLA-F-230ENST00000606273 TOB1P50616 345 aaPredicted RBP13.48□□□□□ -0.25
HLA-F-230ENST00000606273 CCR3P51677 355 aa13.48□□□□□ -0.25
HLA-F-230ENST00000606273 RING1Q06587 406 aa13.48□□□□□ -0.25
HLA-F-230ENST00000606273 SRSF5Q13243 272 aaKnown RBP13.48□□□□□ -0.25
HLA-F-230ENST00000606273 Q4G0T1 1027 aa13.48□□□□□ -0.25
HLA-F-230ENST00000606273 ZNF468Q5VIY5 522 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms