RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 RASGRF2O14827 1237 aa12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 DDNO94850 711 aaPredicted RBP12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 LDHAP00338 332 aaKnown RBP12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 MYBL1P10243 752 aa12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 CREB1P16220 341 aa12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 SLC1A1P43005 524 aa12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 TFAMQ00059 246 aaKnown RBP12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 KYNUQ16719 465 aa12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 SH3D19Q5HYK7 790 aa12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 SPDYCQ5MJ68 293 aa12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 LIN9Q5TKA1 542 aa12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 OTUD6BQ8N6M0 293 aa12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 PPM1EQ8WY54 764 aa12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 CLMNQ96JQ2 1002 aa12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 FAM81BQ96LP2 452 aa12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 LTBP3Q9NS15 1303 aa12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 CEP350Q5VT06 3117 aa12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 FAM189A1O60320 539 aa12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 LAMTOR4Q0VGL1 99 aa12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 SLMAPQ14BN4 828 aa12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 NOL9Q5SY16 702 aaKnown RBP12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 TXNRD3NBQ6F5E7 133 aa12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 SEPT1Q8WYJ6 367 aa12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 KAT2BQ92831 832 aa12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 COPS5Q92905 334 aa12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 PGM2Q96G03 612 aa12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 OSBPL8Q9BZF1 889 aa12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 ELP3Q9H9T3 547 aa12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 CTNNAL1Q9UBT7 734 aa12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 F8VP50 259 aa12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 B4GALT5O43286 388 aa12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 MAFO75444 373 aaPredicted RBP12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 KIAA0754O94854 1291 aa12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 IFNAR2P48551 515 aa12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 KLF1Q13351 362 aaPredicted RBP12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 AUHQ13825 339 aaKnown RBP12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 WDR78Q5VTH9 848 aa12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 FBXW10Q5XX13 1052 aa12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 PLEKHA7Q6IQ23 1121 aa12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 RHPN2Q8IUC4 686 aa12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 RIOX2Q8IUF8 465 aa12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 GLIS1Q8NBF1 620 aa12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 TRIM11Q96F44 468 aa12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 XPO6Q96QU8 1125 aaKnown RBP12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 TXNRD2Q9NNW7 524 aa12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 KCNG1Q9UIX4 513 aa12.53□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 ASS1P00966 412 aaKnown RBP12.52□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 PSMC4P43686 418 aa12.52□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 ENPEPQ07075 957 aa12.52□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 ORC1Q13415 861 aa12.52□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 SPRED3Q2MJR0 410 aa12.52□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 Q3C1V9 767 aa12.52□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 CYP4A22Q5TCH4 519 aa12.52□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 METTL7BQ6UX53 244 aa12.52□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 CPLX4Q7Z7G2 160 aa12.52□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 BRSK2Q8IWQ3 736 aa12.52□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 RHOT1Q8IXI2 618 aa12.52□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.52□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 NLRP4Q96MN2 994 aa12.52□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 PPP1R16BQ96T49 567 aa12.52□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 IMPG2Q9BZV3 1241 aa12.52□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 TMEM134Q9H6X4 195 aa12.52□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 VGLL3A8MV65 326 aa12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ZBTB42B2RXF5 422 aa12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 TOM1L1O75674 476 aa12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ATF7P17544 494 aaPredicted RBP12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 EDNRBP24530 442 aa12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 TBXAS1P24557 533 aaPredicted RBP12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 GBP1P32455 592 aa12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 RFC5P40937 340 aa12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 MMP13P45452 471 aa12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 IRX3P78415 501 aaPredicted RBP12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 OGDHQ02218 1023 aa12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 NEDD9Q14511 834 aa12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 C6orf118Q5T5N4 469 aa12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ERMARDQ5T6L9 678 aa12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 RHBDF2Q6PJF5 856 aa12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 PHF13Q86YI8 300 aaPredicted RBP12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 TMEM192Q8IY95 271 aa12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ATL2Q8NHH9 583 aa12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 FEZF2Q8TBJ5 459 aa12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 TFAP2BQ92481 460 aa12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 HAUS1Q96CS2 278 aa12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 SNF8Q96H20 258 aa12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 SCLT1Q96NL6 688 aa12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 MCEEQ96PE7 176 aa12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ACO2Q99798 780 aaKnown RBP12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 MRPL47Q9HD33 250 aaKnown RBP12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CISHQ9NSE2 258 aa12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 WHRNQ9P202 907 aa12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 IVNS1ABPQ9Y6Y0 642 aa12.52□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 PRKCBP05771 671 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ZSCAN5DPP0CG00 497 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 MMP8P22894 467 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ABCD1P33897 745 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ZNF252P-AS1Q0IIN9 211 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 LRRC14Q15048 493 aa12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 TTC31Q49AM3 519 aaPredicted RBP12.51□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 FAM160B1Q5W0V3 765 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms