RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 KRR1Q13601 381 aaKnown RBP10.06□□□□□ -0.8
CSMD1-217ENST00000602723 FKBP9P1Q75LS8 142 aa10.06□□□□□ -0.8
CSMD1-217ENST00000602723 SETD3Q86TU7 594 aaPredicted RBP10.06□□□□□ -0.8
CSMD1-217ENST00000602723 METTL16Q86W50 562 aaKnown RBP10.06□□□□□ -0.8
CSMD1-217ENST00000602723 SPATA18Q8TC71 538 aa10.06□□□□□ -0.8
CSMD1-217ENST00000602723 KRT35Q92764 455 aa10.06□□□□□ -0.8
CSMD1-217ENST00000602723 LATS2Q9NRM7 1088 aa10.06□□□□□ -0.8
CSMD1-217ENST00000602723 RAB6BQ9NRW1 208 aa10.06□□□□□ -0.8
CSMD1-217ENST00000602723 CLASP2O75122 1294 aaKnown RBP10.05□□□□□ -0.8
CSMD1-217ENST00000602723 MOCS2O96007 188 aaPredicted RBP10.05□□□□□ -0.8
CSMD1-217ENST00000602723 PPP3CCP48454 512 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 CTCFP49711 727 aaPredicted RBP10.05□□□□□ -0.8
CSMD1-217ENST00000602723 PSMC5P62195 406 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 RAD51Q06609 339 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 C18orf8Q96DM3 657 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 ARHGEF26Q96DR7 871 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 KCNF1Q9H3M0 494 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 USP17L10C9JJH3 530 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 ZNF467Q7Z7K2 595 aaPredicted RBP10.05□□□□□ -0.8
CSMD1-217ENST00000602723 APLFQ8IW19 511 aaPredicted RBP10.05□□□□□ -0.8
CSMD1-217ENST00000602723 PDLIM2Q96JY6 352 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 TASP1Q9H6P5 420 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 SLC40A1Q9NP59 571 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 HPS4Q9NQG7 708 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 UVRAGQ9P2Y5 699 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 E2F8A0AVK6 867 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 B2RBV5 119 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 RNF103O00237 685 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 GUCA1CO95843 209 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 ALBP02768 609 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 RALBP11234 206 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 VHLP40337 213 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 TP53BP2Q13625 1128 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 BTBD8Q5XKL5 378 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 PID1Q7Z2X4 250 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 SLC30A5Q8TAD4 765 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 NSUN6Q8TEA1 469 aaKnown RBP10.05□□□□□ -0.8
CSMD1-217ENST00000602723 MANSC1Q9H8J5 431 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 TMEM260Q9NX78 707 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 NDUFS3O75489 264 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 TARSP26639 723 aaKnown RBP10.05□□□□□ -0.8
CSMD1-217ENST00000602723 SOX11P35716 441 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 AP3M2P53677 418 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 HPCAP84074 193 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 CCDC60Q8IWA6 550 aaPredicted RBP10.05□□□□□ -0.8
CSMD1-217ENST00000602723 TERB1Q8NA31 727 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 MARCH10Q8NA82 808 aaPredicted RBP10.05□□□□□ -0.8
CSMD1-217ENST00000602723 OSBPL10Q9BXB5 764 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 AFDNP55196 1824 aaKnown RBP10.05□□□□□ -0.8
CSMD1-217ENST00000602723 RALAP11233 206 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 ARHGAP17Q68EM7 881 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 EFHBQ8N7U6 833 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 CPA5Q8WXQ8 436 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 AGAP3Q96P47 875 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 PPP1R2P1Q96PQ5 205 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 PKP3Q9Y446 797 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 USP6P35125 1406 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 CORO7P57737 925 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 NFX1Q12986 1120 aaKnown RBP10.05□□□□□ -0.8
CSMD1-217ENST00000602723 POLD4Q9HCU8 107 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 CYTH3O43739 400 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 ITIH2P19823 946 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 AKT1P31749 480 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 DIS3LQ8TF46 1054 aaKnown RBP10.05□□□□□ -0.8
CSMD1-217ENST00000602723 DDX50Q9BQ39 737 aaKnown RBP10.05□□□□□ -0.8
CSMD1-217ENST00000602723 CD274Q9NZQ7 290 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 PIGHQ14442 188 aaPredicted RBP10.05□□□□□ -0.8
CSMD1-217ENST00000602723 CCDC81Q6ZN84 652 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 ADGRF4Q8IZF3 695 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 ZNF560Q96MR9 790 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 GLI2P10070 1586 aa10.05□□□□□ -0.8
CSMD1-217ENST00000602723 SOX6P35712 828 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 TTLL4Q14679 1199 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 SHC4Q6S5L8 630 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 FOXP4Q8IVH2 680 aaPredicted RBP10.04□□□□□ -0.8
CSMD1-217ENST00000602723 H2AFY2Q9P0M6 372 aaPredicted RBP10.04□□□□□ -0.8
CSMD1-217ENST00000602723 SCP2P22307 547 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 SULT1E1P49888 294 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 KYNUQ16719 465 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 C3orf62Q6ZUJ4 267 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 RBBP8Q99708 897 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 CPVLQ9H3G5 476 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 CHMP2BQ9UQN3 213 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 TADA1Q96BN2 335 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 COA1Q9GZY4 146 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 FMO5P49326 533 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 MB21D2Q8IYB1 491 aaPredicted RBP10.04□□□□□ -0.8
CSMD1-217ENST00000602723 SPATA33Q96N06 139 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 NFKBIL1Q9UBC1 381 aaPredicted RBP10.04□□□□□ -0.8
CSMD1-217ENST00000602723 ZNF521Q96K83 1311 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 NPHP3-ACAD11A0A0J9YXS1 232 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 A8MXQ7 604 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 DPYSL4O14531 572 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 BAG6P46379 1132 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 FBXO40Q9UH90 709 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 UGGT1Q9NYU2 1555 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 ITIH6Q6UXX5 1313 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 IQGAP3Q86VI3 1631 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 CAPZA2P47755 286 aa10.04□□□□□ -0.8
CSMD1-217ENST00000602723 CHI3L2Q15782 390 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms