RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 HIPK3Q9H422 1215 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 DPP3Q9NY33 737 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 SQORQ9Y6N5 450 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 CTAGE9A4FU28 777 aa18.6■□□□□ 0.57
PPFIA3-207ENST00000602716 SERPING1P05155 500 aa18.6■□□□□ 0.57
PPFIA3-207ENST00000602716 CYP2C18P33260 490 aa18.6■□□□□ 0.57
PPFIA3-207ENST00000602716 CYP27A1Q02318 531 aa18.6■□□□□ 0.57
PPFIA3-207ENST00000602716 CUL2Q13617 745 aa18.6■□□□□ 0.57
PPFIA3-207ENST00000602716 USP38Q8NB14 1042 aa18.6■□□□□ 0.57
PPFIA3-207ENST00000602716 SLC20A1Q8WUM9 679 aa18.6■□□□□ 0.57
PPFIA3-207ENST00000602716 GAD1Q99259 594 aa18.6■□□□□ 0.57
PPFIA3-207ENST00000602716 C11orf49Q9H6J7 331 aa18.6■□□□□ 0.57
PPFIA3-207ENST00000602716 ARFGAP3Q9NP61 516 aa18.6■□□□□ 0.57
PPFIA3-207ENST00000602716 AGAP1Q9UPQ3 857 aa18.6■□□□□ 0.57
PPFIA3-207ENST00000602716 TANC1Q9C0D5 1861 aa18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 PITPNM1O00562 1244 aa18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 TLR3O15455 904 aaKnown RBP18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 ACO1P21399 889 aaKnown RBP18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 USP8P40818 1118 aa18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 ASPAP45381 313 aa18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 RAP1GAPP47736 663 aa18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 KIF11P52732 1056 aa18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 MFAP3P55082 362 aa18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 DNAAF5Q86Y56 855 aa18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 CD302Q8IX05 232 aa18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 SLC35F6Q8N357 371 aa18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 MIOSQ9NXC5 875 aa18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 MYO1AQ9UBC5 1043 aa18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 TBX21Q9UL17 535 aa18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 EPN1Q9Y6I3 576 aaPredicted RBP18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 KIAA0100Q14667 2235 aaKnown RBP18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 TRIP11Q15643 1979 aa18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 CYP26A1O43174 497 aa18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 ABL1P00519 1130 aa18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 ITGA4P13612 1032 aa18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 KCNE1P15382 129 aa18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 IGFBP6P24592 240 aaPredicted RBP18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 PRKCIP41743 596 aa18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 GFPT1Q06210 699 aaPredicted RBP18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 MAPK8IP2Q13387 824 aaPredicted RBP18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 FAM71AQ8IYT1 594 aa18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 UBR7Q8N806 425 aa18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 DBF4BQ8NFT6 615 aa18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 SYT11Q9BT88 431 aa18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 NIF3L1Q9GZT8 377 aa18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 SDCBP2Q9H190 292 aa18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 NXF1Q9UBU9 619 aaKnown RBP18.59■□□□□ 0.57
PPFIA3-207ENST00000602716 A0A0U1RQF3 1178 aa18.58■□□□□ 0.56
PPFIA3-207ENST00000602716 CCDC151A5D8V7 595 aa18.58■□□□□ 0.56
PPFIA3-207ENST00000602716 DCDC2CA8MYV0 355 aa18.58■□□□□ 0.56
PPFIA3-207ENST00000602716 FERP16591 822 aa18.58■□□□□ 0.56
PPFIA3-207ENST00000602716 BRD3Q15059 726 aa18.58■□□□□ 0.56
PPFIA3-207ENST00000602716 C1orf53Q5VUE5 145 aa18.58■□□□□ 0.56
PPFIA3-207ENST00000602716 MRPL10Q7Z7H8 261 aaKnown RBP18.58■□□□□ 0.56
PPFIA3-207ENST00000602716 PALB2Q86YC2 1186 aa18.58■□□□□ 0.56
PPFIA3-207ENST00000602716 ANKLE1Q8NAG6 615 aa18.58■□□□□ 0.56
PPFIA3-207ENST00000602716 LNX1Q8TBB1 728 aaPredicted RBP18.58■□□□□ 0.56
PPFIA3-207ENST00000602716 CCDC42Q96M95 316 aa18.58■□□□□ 0.56
PPFIA3-207ENST00000602716 TRAIPQ9BWF2 469 aa18.58■□□□□ 0.56
PPFIA3-207ENST00000602716 IMPG2Q9BZV3 1241 aa18.58■□□□□ 0.56
PPFIA3-207ENST00000602716 SMYD3Q9H7B4 428 aa18.58■□□□□ 0.56
PPFIA3-207ENST00000602716 ITGA11Q9UKX5 1188 aa18.58■□□□□ 0.56
PPFIA3-207ENST00000602716 DERAQ9Y315 318 aa18.58■□□□□ 0.56
PPFIA3-207ENST00000602716 DAAM1Q9Y4D1 1078 aa18.58■□□□□ 0.56
PPFIA3-207ENST00000602716 SCNN1GP51170 649 aa18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 SGSM1Q2NKQ1 1148 aa18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 ZNF598Q86UK7 904 aaKnown RBP18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 SLC47A2Q86VL8 602 aa18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 ECHDC2Q86YB7 292 aa18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 NT5DC4Q86YG4 428 aa18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 VWCEQ96DN2 955 aa18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 TOX2Q96NM4 488 aa18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 PPP1R10Q96QC0 940 aaKnown RBP18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 NAPGQ99747 312 aaPredicted RBP18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 PUF60Q9UHX1 559 aaKnown RBP18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 PDCD11Q14690 1871 aaKnown RBP18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 SCN5AQ14524 2016 aa18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 A0A087X0T9 212 aa18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 SSU72P8A0A1W2PR75 194 aa18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 RCCD1A6NED2 376 aa18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 ARL5CA6NH57 179 aa18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 C9IYK1 514 aa18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 FAM228BP0C875 321 aa18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 KRT5P13647 590 aa18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 CD58P19256 250 aa18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 NAB2Q15742 525 aa18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 PLEKHG4Q58EX7 1191 aa18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 NOP9Q86U38 636 aaKnown RBP18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 EPS8L1Q8TE68 723 aa18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 FUT8Q9BYC5 575 aa18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 DEF6Q9H4E7 631 aa18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 ANKZF1Q9H8Y5 726 aa18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 RGS18Q9NS28 235 aa18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 TRIM10Q9UDY6 481 aa18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 UBQLN1Q9UMX0 589 aaKnown RBP18.57■□□□□ 0.56
PPFIA3-207ENST00000602716 ZNF623O75123 536 aa18.56■□□□□ 0.56
PPFIA3-207ENST00000602716 WEE2P0C1S8 567 aa18.56■□□□□ 0.56
PPFIA3-207ENST00000602716 EN2P19622 333 aaPredicted RBP18.56■□□□□ 0.56
PPFIA3-207ENST00000602716 ITGB8P26012 769 aa18.56■□□□□ 0.56
PPFIA3-207ENST00000602716 RAB27AP51159 221 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms