RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 PFDN2Q9UHV9 154 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 SNX12Q9UMY4 172 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 MAPRE3Q9UPY8 281 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 ZNF335Q9H4Z2 1342 aaPredicted RBP9.33□□□□□ -0.92
COMMD3-215ENST00000602574 CPDO75976 1380 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 EDC4Q6P2E9 1401 aaKnown RBP9.33□□□□□ -0.92
COMMD3-215ENST00000602574 A0A0U1RQJ8 604 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 C1orf232A0A0U1RR37 186 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 A8MXQ7 604 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 BHMG1C9JSJ3 638 aaPredicted RBP9.33□□□□□ -0.92
COMMD3-215ENST00000602574 H7C0C1 242 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 OPHN1O60890 802 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 PSMG1O95456 288 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 ITGAXP20702 1163 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 SLC5A2P31639 672 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 IGHMBP2P38935 993 aaKnown RBP9.33□□□□□ -0.92
COMMD3-215ENST00000602574 DAB2P98082 770 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 USP50Q70EL3 339 aaPredicted RBP9.33□□□□□ -0.92
COMMD3-215ENST00000602574 ADGRG6Q86SQ4 1221 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 AKAP14Q86UN6 197 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 NUTM2AQ8IVF1 878 aaPredicted RBP9.33□□□□□ -0.92
COMMD3-215ENST00000602574 NKAIN4Q8IVV8 208 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 SLC17A8Q8NDX2 589 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 OTUD7AQ8TE49 926 aaPredicted RBP9.33□□□□□ -0.92
COMMD3-215ENST00000602574 RAPGEF4Q8WZA2 1011 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 TRIM63Q969Q1 353 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 DDX50Q9BQ39 737 aaKnown RBP9.33□□□□□ -0.92
COMMD3-215ENST00000602574 TDRD1Q9BXT4 1180 aaKnown RBP9.33□□□□□ -0.92
COMMD3-215ENST00000602574 UCK1Q9HA47 277 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 ZNF287Q9HBT7 754 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 MRPL39Q9NYK5 338 aaKnown RBP9.33□□□□□ -0.92
COMMD3-215ENST00000602574 NUP50Q9UKX7 468 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 MLH3Q9UHC1 1453 aa9.33□□□□□ -0.92
COMMD3-215ENST00000602574 ERCC6L2Q5T890 1561 aa9.32□□□□□ -0.92
COMMD3-215ENST00000602574 SPATA31D1Q6ZQQ2 1576 aa9.32□□□□□ -0.92
COMMD3-215ENST00000602574 FAM208AQ9UK61 1670 aaKnown RBP9.32□□□□□ -0.92
COMMD3-215ENST00000602574 MYH2Q9UKX2 1941 aa9.32□□□□□ -0.92
COMMD3-215ENST00000602574 A0A087WZG4 1122 aa9.32□□□□□ -0.92
COMMD3-215ENST00000602574 ILVBLA1L0T0 632 aa9.32□□□□□ -0.92
COMMD3-215ENST00000602574 CAPN14A8MX76 684 aa9.32□□□□□ -0.92
COMMD3-215ENST00000602574 K7EPI3 171 aa9.32□□□□□ -0.92
COMMD3-215ENST00000602574 ADAM11O75078 769 aa9.32□□□□□ -0.92
COMMD3-215ENST00000602574 FAM228BP0C875 321 aa9.32□□□□□ -0.92
COMMD3-215ENST00000602574 HSPA6P17066 643 aa9.32□□□□□ -0.92
COMMD3-215ENST00000602574 PEX3P56589 373 aa9.32□□□□□ -0.92
COMMD3-215ENST00000602574 ASPHQ12797 758 aa9.32□□□□□ -0.92
COMMD3-215ENST00000602574 CDC20Q12834 499 aa9.32□□□□□ -0.92
COMMD3-215ENST00000602574 VWA3BQ502W6 1294 aa9.32□□□□□ -0.92
COMMD3-215ENST00000602574 KCNT1Q5JUK3 1230 aa9.32□□□□□ -0.92
COMMD3-215ENST00000602574 C12orf60Q5U649 245 aa9.32□□□□□ -0.92
COMMD3-215ENST00000602574 POTEHQ6S545 545 aa9.32□□□□□ -0.92
COMMD3-215ENST00000602574 DPH6Q7L8W6 267 aa9.32□□□□□ -0.92
COMMD3-215ENST00000602574 CDH26Q8IXH8 852 aa9.32□□□□□ -0.92
COMMD3-215ENST00000602574 FITM2Q8N6M3 262 aa9.32□□□□□ -0.92
COMMD3-215ENST00000602574 C11orf24Q96F05 449 aaPredicted RBP9.32□□□□□ -0.92
COMMD3-215ENST00000602574 C7orf26Q96N11 449 aa9.32□□□□□ -0.92
COMMD3-215ENST00000602574 GGA3Q9NZ52 723 aa9.32□□□□□ -0.92
COMMD3-215ENST00000602574 TBC1D14Q9P2M4 693 aa9.32□□□□□ -0.92
COMMD3-215ENST00000602574 DACH1Q9UI36 760 aa9.32□□□□□ -0.92
COMMD3-215ENST00000602574 NOVA2Q9UNW9 492 aaKnown RBP9.32□□□□□ -0.92
COMMD3-215ENST00000602574 CYP46A1Q9Y6A2 500 aa9.32□□□□□ -0.92
COMMD3-215ENST00000602574 MYH8P13535 1937 aa9.32□□□□□ -0.92
COMMD3-215ENST00000602574 ARHGEF35A5YM69 484 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 GRXCR2A6NFK2 248 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.31□□□□□ -0.92
COMMD3-215ENST00000602574 SEMA3EO15041 775 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 ACOX3O15254 700 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 KRT86O43790 486 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 RNASEH1O60930 286 aaKnown RBP9.31□□□□□ -0.92
COMMD3-215ENST00000602574 OR6B1O95007 311 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 GSTM2P28161 218 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 HSD17B3P37058 310 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 CHN2P52757 468 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 AP2S1P53680 142 aaPredicted RBP9.31□□□□□ -0.92
COMMD3-215ENST00000602574 MAGOHP61326 146 aaKnown RBP9.31□□□□□ -0.92
COMMD3-215ENST00000602574 RAD51Q06609 339 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 RAPGEF1Q13905 1077 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 C16orf72Q14CZ0 275 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 PLA2G4EQ3MJ16 856 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 ELMSAN1Q6PJG2 1045 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 LARP1Q6PKG0 1096 aaKnown RBP9.31□□□□□ -0.92
COMMD3-215ENST00000602574 RAPH1Q70E73 1250 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 KBTBD2Q8IY47 623 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 LHFPL5Q8TAF8 219 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 TTC8Q8TAM2 541 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 NELL1Q92832 810 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 MAGOHBQ96A72 148 aaKnown RBP9.31□□□□□ -0.92
COMMD3-215ENST00000602574 SLC47A1Q96FL8 570 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 PGM2Q96G03 612 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 TRIM47Q96LD4 638 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 INPP4AQ96PE3 977 aaPredicted RBP9.31□□□□□ -0.92
COMMD3-215ENST00000602574 C17orf80Q9BSJ5 609 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 ZBED2Q9BTP6 218 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 POLHQ9Y253 713 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 PSME4Q14997 1843 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 A0A087WWV3 80 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 SMCO2A6NFE2 343 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 UBAP1LF5GYI3 381 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 H7C1D1 291 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 ZNF701M0R085 212 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms