RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 DSTYKQ6XUX3 929 aa18.09■□□□□ 0.49
SSBP4-213ENST00000602088 C15orf39Q6ZRI6 1047 aa18.09■□□□□ 0.49
SSBP4-213ENST00000602088 GOLGA5Q8TBA6 731 aa18.09■□□□□ 0.49
SSBP4-213ENST00000602088 CACTINQ8WUQ7 758 aaKnown RBP18.09■□□□□ 0.49
SSBP4-213ENST00000602088 TIGD1Q96MW7 591 aa18.09■□□□□ 0.49
SSBP4-213ENST00000602088 NECTIN4Q96NY8 510 aa18.09■□□□□ 0.49
SSBP4-213ENST00000602088 KCTD10Q9H3F6 313 aa18.09■□□□□ 0.49
SSBP4-213ENST00000602088 POMKQ9H5K3 350 aa18.09■□□□□ 0.49
SSBP4-213ENST00000602088 FBXW11Q9UKB1 542 aa18.09■□□□□ 0.49
SSBP4-213ENST00000602088 SCN1AP35498 2009 aa18.08■□□□□ 0.49
SSBP4-213ENST00000602088 CCDC195A0A1B0GUA6 201 aa18.08■□□□□ 0.48
SSBP4-213ENST00000602088 LOC730098B7Z3J9 87 aa18.08■□□□□ 0.48
SSBP4-213ENST00000602088 TULP1O00294 542 aaPredicted RBP18.08■□□□□ 0.48
SSBP4-213ENST00000602088 PDXKO00764 312 aa18.08■□□□□ 0.48
SSBP4-213ENST00000602088 GADD45BO75293 160 aaPredicted RBP18.08■□□□□ 0.48
SSBP4-213ENST00000602088 CTXN3Q4LDR2 81 aa18.08■□□□□ 0.48
SSBP4-213ENST00000602088 CYP26C1Q6V0L0 522 aa18.08■□□□□ 0.48
SSBP4-213ENST00000602088 C1orf127Q8N9H9 656 aa18.08■□□□□ 0.48
SSBP4-213ENST00000602088 RDH13Q8NBN7 331 aa18.08■□□□□ 0.48
SSBP4-213ENST00000602088 TMEM174Q8WUU8 243 aa18.08■□□□□ 0.48
SSBP4-213ENST00000602088 SENP8Q96LD8 212 aa18.08■□□□□ 0.48
SSBP4-213ENST00000602088 RHOBTB2Q9BYZ6 727 aa18.08■□□□□ 0.48
SSBP4-213ENST00000602088 ZDHHC7Q9NXF8 308 aa18.08■□□□□ 0.48
SSBP4-213ENST00000602088 FBXL5Q9UKA1 691 aa18.08■□□□□ 0.48
SSBP4-213ENST00000602088 TIMM13Q9Y5L4 95 aaPredicted RBP18.08■□□□□ 0.48
SSBP4-213ENST00000602088 TRIOO75962 3097 aa18.08■□□□□ 0.48
SSBP4-213ENST00000602088 ZMYND10O75800 440 aa18.07■□□□□ 0.48
SSBP4-213ENST00000602088 OAZ2O95190 189 aa18.07■□□□□ 0.48
SSBP4-213ENST00000602088 KIF20AO95235 890 aa18.07■□□□□ 0.48
SSBP4-213ENST00000602088 TAF6P49848 677 aa18.07■□□□□ 0.48
SSBP4-213ENST00000602088 ROR1Q01973 937 aa18.07■□□□□ 0.48
SSBP4-213ENST00000602088 ZNF280DQ6N043 979 aa18.07■□□□□ 0.48
SSBP4-213ENST00000602088 SLC9A9Q8IVB4 645 aa18.07■□□□□ 0.48
SSBP4-213ENST00000602088 ZNF461Q8TAF7 563 aa18.07■□□□□ 0.48
SSBP4-213ENST00000602088 CXorf38Q8TB03 319 aa18.07■□□□□ 0.48
SSBP4-213ENST00000602088 ZNF707Q96C28 371 aaPredicted RBP18.07■□□□□ 0.48
SSBP4-213ENST00000602088 BORCS6Q96GS4 357 aa18.07■□□□□ 0.48
SSBP4-213ENST00000602088 FAM84AQ96KN4 292 aa18.07■□□□□ 0.48
SSBP4-213ENST00000602088 INTS13Q9NVM9 706 aa18.07■□□□□ 0.48
SSBP4-213ENST00000602088 DMAC2Q9NW81 257 aa18.07■□□□□ 0.48
SSBP4-213ENST00000602088 PTPRJQ12913 1337 aa18.06■□□□□ 0.48
SSBP4-213ENST00000602088 EXOC3O60645 756 aa18.06■□□□□ 0.48
SSBP4-213ENST00000602088 ABLIM3O94929 683 aa18.06■□□□□ 0.48
SSBP4-213ENST00000602088 ITGB3P05106 788 aa18.06■□□□□ 0.48
SSBP4-213ENST00000602088 CYP11A1P05108 521 aa18.06■□□□□ 0.48
SSBP4-213ENST00000602088 TMEM191BP0C7N4 346 aa18.06■□□□□ 0.48
SSBP4-213ENST00000602088 ODC1P11926 461 aa18.06■□□□□ 0.48
SSBP4-213ENST00000602088 TYMPP19971 482 aa18.06■□□□□ 0.48
SSBP4-213ENST00000602088 POLR2BP30876 1174 aaKnown RBP18.06■□□□□ 0.48
SSBP4-213ENST00000602088 YWHAHQ04917 246 aaPredicted RBP18.06■□□□□ 0.48
SSBP4-213ENST00000602088 CYP24A1Q07973 514 aa18.06■□□□□ 0.48
SSBP4-213ENST00000602088 UVSSAQ2YD98 709 aa18.06■□□□□ 0.48
SSBP4-213ENST00000602088 LIN9Q5TKA1 542 aa18.06■□□□□ 0.48
SSBP4-213ENST00000602088 LMBRD2Q68DH5 695 aaPredicted RBP18.06■□□□□ 0.48
SSBP4-213ENST00000602088 SCARA3Q6AZY7 606 aa18.06■□□□□ 0.48
SSBP4-213ENST00000602088 WDR49Q8IV35 697 aa18.06■□□□□ 0.48
SSBP4-213ENST00000602088 GUF1Q8N442 669 aaKnown RBP18.06■□□□□ 0.48
SSBP4-213ENST00000602088 CSGALNACT2Q8N6G5 542 aa18.06■□□□□ 0.48
SSBP4-213ENST00000602088 OR5B17Q8NGF7 314 aa18.06■□□□□ 0.48
SSBP4-213ENST00000602088 ANKRD36BP1Q96IX9 119 aa18.06■□□□□ 0.48
SSBP4-213ENST00000602088 RPGRIP1Q96KN7 1286 aa18.06■□□□□ 0.48
SSBP4-213ENST00000602088 OXCT2Q9BYC2 517 aaPredicted RBP18.06■□□□□ 0.48
SSBP4-213ENST00000602088 PRKD2Q9BZL6 878 aa18.06■□□□□ 0.48
SSBP4-213ENST00000602088 MTMR12Q9C0I1 747 aa18.06■□□□□ 0.48
SSBP4-213ENST00000602088 ITGA11Q9UKX5 1188 aa18.06■□□□□ 0.48
SSBP4-213ENST00000602088 AGAP1Q9UPQ3 857 aa18.06■□□□□ 0.48
SSBP4-213ENST00000602088 MAPK8IP1Q9UQF2 711 aa18.06■□□□□ 0.48
SSBP4-213ENST00000602088 C2orf16Q68DN1 1984 aa18.06■□□□□ 0.48
SSBP4-213ENST00000602088 WDR27A2RRH5 827 aa18.05■□□□□ 0.48
SSBP4-213ENST00000602088 KPNA7A9QM74 516 aa18.05■□□□□ 0.48
SSBP4-213ENST00000602088 C8AP07357 584 aa18.05■□□□□ 0.48
SSBP4-213ENST00000602088 PNPLA4P41247 253 aa18.05■□□□□ 0.48
SSBP4-213ENST00000602088 ARPP19P56211 112 aa18.05■□□□□ 0.48
SSBP4-213ENST00000602088 PSMD6Q15008 389 aa18.05■□□□□ 0.48
SSBP4-213ENST00000602088 DUOXA2Q1HG44 320 aa18.05■□□□□ 0.48
SSBP4-213ENST00000602088 TPGS2Q68CL5 300 aa18.05■□□□□ 0.48
SSBP4-213ENST00000602088 RTL10Q7L3V2 364 aa18.05■□□□□ 0.48
SSBP4-213ENST00000602088 USP37Q86T82 979 aa18.05■□□□□ 0.48
SSBP4-213ENST00000602088 ELOA2Q8IYF1 753 aaPredicted RBP18.05■□□□□ 0.48
SSBP4-213ENST00000602088 LRRC52Q8N7C0 313 aa18.05■□□□□ 0.48
SSBP4-213ENST00000602088 SPATA20Q8TB22 786 aa18.05■□□□□ 0.48
SSBP4-213ENST00000602088 SMG7Q92540 1137 aaKnown RBP18.05■□□□□ 0.48
SSBP4-213ENST00000602088 KHSRPQ92945 711 aaKnown RBP eCLIP18.05■□□□□ 0.48
SSBP4-213ENST00000602088 MFSD14AQ96MC6 490 aa18.05■□□□□ 0.48
SSBP4-213ENST00000602088 GSDMAQ96QA5 445 aa18.05■□□□□ 0.48
SSBP4-213ENST00000602088 GZF1Q9H116 711 aaPredicted RBP18.05■□□□□ 0.48
SSBP4-213ENST00000602088 RMND1Q9NWS8 449 aa18.05■□□□□ 0.48
SSBP4-213ENST00000602088 SIX4Q9UIU6 781 aa18.05■□□□□ 0.48
SSBP4-213ENST00000602088 TRAF3IP3Q9Y228 551 aa18.05■□□□□ 0.48
SSBP4-213ENST00000602088 PCDHA5Q9Y5H7 936 aa18.05■□□□□ 0.48
SSBP4-213ENST00000602088 ARHGEF37A1IGU5 675 aa18.04■□□□□ 0.48
SSBP4-213ENST00000602088 CYB561D2O14569 222 aa18.04■□□□□ 0.48
SSBP4-213ENST00000602088 HNRNPA1P09651 372 aaKnown RBP eCLIP18.04■□□□□ 0.48
SSBP4-213ENST00000602088 ATF2P15336 505 aa18.04■□□□□ 0.48
SSBP4-213ENST00000602088 HOXA9P31269 272 aa18.04■□□□□ 0.48
SSBP4-213ENST00000602088 RBP5P82980 135 aa18.04■□□□□ 0.48
SSBP4-213ENST00000602088 MYBPC2Q14324 1141 aa18.04■□□□□ 0.48
SSBP4-213ENST00000602088 SV2CQ496J9 727 aa18.04■□□□□ 0.48
SSBP4-213ENST00000602088 OVOS1Q6IE37 1185 aa18.04■□□□□ 0.48
SSBP4-213ENST00000602088 SLC7A14Q8TBB6 771 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms