RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 HSPBP1Q9NZL4 362 aa18.95■□□□□ 0.62
IRF3-230ENST00000601809 MUTYHQ9UIF7 546 aa18.95■□□□□ 0.62
IRF3-230ENST00000601809 PTPRJQ12913 1337 aa18.95■□□□□ 0.62
IRF3-230ENST00000601809 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.94■□□□□ 0.62
IRF3-230ENST00000601809 DCXO43602 365 aa18.94■□□□□ 0.62
IRF3-230ENST00000601809 PAX3P23760 479 aa18.94■□□□□ 0.62
IRF3-230ENST00000601809 SNRPFP62306 86 aaKnown RBP18.94■□□□□ 0.62
IRF3-230ENST00000601809 DPYDQ12882 1025 aa18.94■□□□□ 0.62
IRF3-230ENST00000601809 CBWD2Q8IUF1 395 aa18.94■□□□□ 0.62
IRF3-230ENST00000601809 C1orf127Q8N9H9 656 aa18.94■□□□□ 0.62
IRF3-230ENST00000601809 APPL2Q8NEU8 664 aa18.94■□□□□ 0.62
IRF3-230ENST00000601809 ENGASEQ8NFI3 743 aa18.94■□□□□ 0.62
IRF3-230ENST00000601809 TMEM174Q8WUU8 243 aa18.94■□□□□ 0.62
IRF3-230ENST00000601809 DPP3Q9NY33 737 aa18.94■□□□□ 0.62
IRF3-230ENST00000601809 H7C4K7 107 aa18.93■□□□□ 0.62
IRF3-230ENST00000601809 ZNF202O95125 648 aa18.93■□□□□ 0.62
IRF3-230ENST00000601809 VNN2O95498 520 aa18.93■□□□□ 0.62
IRF3-230ENST00000601809 CYP11A1P05108 521 aa18.93■□□□□ 0.62
IRF3-230ENST00000601809 C8AP07357 584 aa18.93■□□□□ 0.62
IRF3-230ENST00000601809 HNRNPA1P09651 372 aaKnown RBP eCLIP18.93■□□□□ 0.62
IRF3-230ENST00000601809 TYMPP19971 482 aa18.93■□□□□ 0.62
IRF3-230ENST00000601809 SNW1Q13573 536 aaKnown RBP18.93■□□□□ 0.62
IRF3-230ENST00000601809 KNOP1Q1ED39 458 aaKnown RBP18.93■□□□□ 0.62
IRF3-230ENST00000601809 UVSSAQ2YD98 709 aa18.93■□□□□ 0.62
IRF3-230ENST00000601809 RTL10Q7L3V2 364 aa18.93■□□□□ 0.62
IRF3-230ENST00000601809 NELFCDQ8IXH7 590 aa18.93■□□□□ 0.62
IRF3-230ENST00000601809 ZDHHC14Q8IZN3 488 aa18.93■□□□□ 0.62
IRF3-230ENST00000601809 FMR1NBQ8N0W7 255 aaPredicted RBP18.93■□□□□ 0.62
IRF3-230ENST00000601809 ZNF461Q8TAF7 563 aa18.93■□□□□ 0.62
IRF3-230ENST00000601809 SMG7Q92540 1137 aaKnown RBP18.93■□□□□ 0.62
IRF3-230ENST00000601809 SENP8Q96LD8 212 aa18.93■□□□□ 0.62
IRF3-230ENST00000601809 KCTD10Q9H3F6 313 aa18.93■□□□□ 0.62
IRF3-230ENST00000601809 PDE11AQ9HCR9 933 aa18.93■□□□□ 0.62
IRF3-230ENST00000601809 NR2E1Q9Y466 385 aa18.93■□□□□ 0.62
IRF3-230ENST00000601809 TIMM13Q9Y5L4 95 aaPredicted RBP18.93■□□□□ 0.62
IRF3-230ENST00000601809 TECTAO75443 2155 aa18.93■□□□□ 0.62
IRF3-230ENST00000601809 CLUHO75153 1309 aa18.93■□□□□ 0.62
IRF3-230ENST00000601809 ARHGEF37A1IGU5 675 aa18.92■□□□□ 0.62
IRF3-230ENST00000601809 GPR37L1O60883 481 aa18.92■□□□□ 0.62
IRF3-230ENST00000601809 RHOBTB3O94955 611 aa18.92■□□□□ 0.62
IRF3-230ENST00000601809 ATF2P15336 505 aa18.92■□□□□ 0.62
IRF3-230ENST00000601809 SP100P23497 879 aaPredicted RBP18.92■□□□□ 0.62
IRF3-230ENST00000601809 PSMD2Q13200 908 aa18.92■□□□□ 0.62
IRF3-230ENST00000601809 CTXN3Q4LDR2 81 aa18.92■□□□□ 0.62
IRF3-230ENST00000601809 ZNF280DQ6N043 979 aa18.92■□□□□ 0.62
IRF3-230ENST00000601809 ELMSAN1Q6PJG2 1045 aa18.92■□□□□ 0.62
IRF3-230ENST00000601809 DMAC2Q9NW81 257 aa18.92■□□□□ 0.62
IRF3-230ENST00000601809 SIX4Q9UIU6 781 aa18.92■□□□□ 0.62
IRF3-230ENST00000601809 MYO10Q9HD67 2058 aa18.92■□□□□ 0.62
IRF3-230ENST00000601809 CLIC2O15247 247 aa18.91■□□□□ 0.62
IRF3-230ENST00000601809 SEC24AO95486 1093 aa18.91■□□□□ 0.62
IRF3-230ENST00000601809 RPN1P04843 607 aaKnown RBP18.91■□□□□ 0.62
IRF3-230ENST00000601809 ALADP13716 330 aa18.91■□□□□ 0.62
IRF3-230ENST00000601809 TPGS2Q68CL5 300 aa18.91■□□□□ 0.62
IRF3-230ENST00000601809 CCDC149Q6ZUS6 474 aa18.91■□□□□ 0.62
IRF3-230ENST00000601809 TCEAL8Q8IYN2 117 aa18.91■□□□□ 0.62
IRF3-230ENST00000601809 SLC7A14Q8TBB6 771 aa18.91■□□□□ 0.62
IRF3-230ENST00000601809 RTP3Q9BQQ7 232 aa18.91■□□□□ 0.62
IRF3-230ENST00000601809 C1QTNF1Q9BXJ1 281 aa18.91■□□□□ 0.62
IRF3-230ENST00000601809 EXOC1Q9NV70 894 aa18.91■□□□□ 0.62
IRF3-230ENST00000601809 CGNQ9P2M7 1197 aaKnown RBP18.91■□□□□ 0.62
IRF3-230ENST00000601809 CIZ1Q9ULV3 898 aaPredicted RBP18.91■□□□□ 0.62
IRF3-230ENST00000601809 ZNF233A6NK53 670 aa18.9■□□□□ 0.62
IRF3-230ENST00000601809 TAF6P49848 677 aa18.9■□□□□ 0.62
IRF3-230ENST00000601809 YWHAHQ04917 246 aaPredicted RBP18.9■□□□□ 0.62
IRF3-230ENST00000601809 LIN9Q5TKA1 542 aa18.9■□□□□ 0.62
IRF3-230ENST00000601809 DSTYKQ6XUX3 929 aa18.9■□□□□ 0.62
IRF3-230ENST00000601809 OR5B17Q8NGF7 314 aa18.9■□□□□ 0.62
IRF3-230ENST00000601809 OXCT2Q9BYC2 517 aaPredicted RBP18.9■□□□□ 0.62
IRF3-230ENST00000601809 KIAA1586Q9HCI6 787 aa18.9■□□□□ 0.62
IRF3-230ENST00000601809 INTS13Q9NVM9 706 aa18.9■□□□□ 0.62
IRF3-230ENST00000601809 AFF4Q9UHB7 1163 aaKnown RBP18.9■□□□□ 0.62
IRF3-230ENST00000601809 SPDYE4A6NLX3 237 aa18.89■□□□□ 0.61
IRF3-230ENST00000601809 ITGB3P05106 788 aa18.89■□□□□ 0.61
IRF3-230ENST00000601809 TFAMQ00059 246 aaKnown RBP18.89■□□□□ 0.61
IRF3-230ENST00000601809 KCNB1Q14721 858 aa18.89■□□□□ 0.61
IRF3-230ENST00000601809 SNRNP35Q16560 246 aaKnown RBP18.89■□□□□ 0.61
IRF3-230ENST00000601809 PTPN21Q16825 1174 aa18.89■□□□□ 0.61
IRF3-230ENST00000601809 PPM1LQ5SGD2 360 aa18.89■□□□□ 0.61
IRF3-230ENST00000601809 LMBRD2Q68DH5 695 aaPredicted RBP18.89■□□□□ 0.61
IRF3-230ENST00000601809 RNF19BQ6ZMZ0 732 aa18.89■□□□□ 0.61
IRF3-230ENST00000601809 LIMS2Q7Z4I7 341 aa18.89■□□□□ 0.61
IRF3-230ENST00000601809 SLC9A9Q8IVB4 645 aa18.89■□□□□ 0.61
IRF3-230ENST00000601809 LRRC52Q8N7C0 313 aa18.89■□□□□ 0.61
IRF3-230ENST00000601809 TDRD5Q8NAT2 981 aaKnown RBP18.89■□□□□ 0.61
IRF3-230ENST00000601809 XXYLT1Q8NBI6 393 aa18.89■□□□□ 0.61
IRF3-230ENST00000601809 OR10T2Q8NGX3 314 aa18.89■□□□□ 0.61
IRF3-230ENST00000601809 PLEKHO2Q8TD55 490 aa18.89■□□□□ 0.61
IRF3-230ENST00000601809 EDAQ92838 391 aa18.89■□□□□ 0.61
IRF3-230ENST00000601809 MFSD14AQ96MC6 490 aa18.89■□□□□ 0.61
IRF3-230ENST00000601809 MYADMQ96S97 322 aa18.89■□□□□ 0.61
IRF3-230ENST00000601809 TMEM209Q96SK2 561 aa18.89■□□□□ 0.61
IRF3-230ENST00000601809 LRFN3Q9BTN0 628 aa18.89■□□□□ 0.61
IRF3-230ENST00000601809 MTMR12Q9C0I1 747 aa18.89■□□□□ 0.61
IRF3-230ENST00000601809 TSHZ2Q9NRE2 1034 aa18.89■□□□□ 0.61
IRF3-230ENST00000601809 ITGA11Q9UKX5 1188 aa18.89■□□□□ 0.61
IRF3-230ENST00000601809 MAFFQ9ULX9 164 aa18.89■□□□□ 0.61
IRF3-230ENST00000601809 OR6C75A6NL08 312 aa18.88■□□□□ 0.61
IRF3-230ENST00000601809 KPNA7A9QM74 516 aa18.88■□□□□ 0.61
IRF3-230ENST00000601809 CCL16O15467 120 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms