RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 ABLIM3O94929 683 aa18.61■□□□□ 0.57
HERC3-214ENST00000601319 TYMPP19971 482 aa18.61■□□□□ 0.57
HERC3-214ENST00000601319 CASP1P29466 404 aa18.61■□□□□ 0.57
HERC3-214ENST00000601319 GRAMD1CQ8IYS0 662 aa18.61■□□□□ 0.57
HERC3-214ENST00000601319 GPD1LQ8N335 351 aa18.61■□□□□ 0.57
HERC3-214ENST00000601319 TMEM130Q8N3G9 435 aa18.61■□□□□ 0.57
HERC3-214ENST00000601319 SLC7A14Q8TBB6 771 aa18.61■□□□□ 0.57
HERC3-214ENST00000601319 SCFD1Q8WVM8 642 aa18.61■□□□□ 0.57
HERC3-214ENST00000601319 EDAQ92838 391 aa18.61■□□□□ 0.57
HERC3-214ENST00000601319 ACSF2Q96CM8 615 aaPredicted RBP18.61■□□□□ 0.57
HERC3-214ENST00000601319 PAGE5Q96GU1 130 aa18.61■□□□□ 0.57
HERC3-214ENST00000601319 DPP3Q9NY33 737 aa18.61■□□□□ 0.57
HERC3-214ENST00000601319 MAFFQ9ULX9 164 aa18.61■□□□□ 0.57
HERC3-214ENST00000601319 WDR27A2RRH5 827 aa18.6■□□□□ 0.57
HERC3-214ENST00000601319 PRR33A8MZF0 331 aa18.6■□□□□ 0.57
HERC3-214ENST00000601319 PPEF2O14830 753 aa18.6■□□□□ 0.57
HERC3-214ENST00000601319 KLRC4O43908 158 aa18.6■□□□□ 0.57
HERC3-214ENST00000601319 SP100P23497 879 aaPredicted RBP18.6■□□□□ 0.57
HERC3-214ENST00000601319 SYKP43405 635 aa18.6■□□□□ 0.57
HERC3-214ENST00000601319 NDUFA8P51970 172 aa18.6■□□□□ 0.57
HERC3-214ENST00000601319 YWHAHQ04917 246 aaPredicted RBP18.6■□□□□ 0.57
HERC3-214ENST00000601319 CTXN3Q4LDR2 81 aa18.6■□□□□ 0.57
HERC3-214ENST00000601319 PPM1LQ5SGD2 360 aa18.6■□□□□ 0.57
HERC3-214ENST00000601319 TPGS2Q68CL5 300 aa18.6■□□□□ 0.57
HERC3-214ENST00000601319 ZSWIM2Q8NEG5 633 aa18.6■□□□□ 0.57
HERC3-214ENST00000601319 PIDD1Q9HB75 910 aa18.6■□□□□ 0.57
HERC3-214ENST00000601319 KIAA1586Q9HCI6 787 aa18.6■□□□□ 0.57
HERC3-214ENST00000601319 AGPAT3Q9NRZ7 376 aa18.6■□□□□ 0.57
HERC3-214ENST00000601319 CGNQ9P2M7 1197 aaKnown RBP18.6■□□□□ 0.57
HERC3-214ENST00000601319 KMT2EQ8IZD2 1858 aa18.59■□□□□ 0.57
HERC3-214ENST00000601319 TGFB1I1O43294 461 aa18.59■□□□□ 0.57
HERC3-214ENST00000601319 XYLBO75191 536 aa18.59■□□□□ 0.57
HERC3-214ENST00000601319 ODC1P11926 461 aa18.59■□□□□ 0.57
HERC3-214ENST00000601319 ATF2P15336 505 aa18.59■□□□□ 0.57
HERC3-214ENST00000601319 WNT7BP56706 349 aa18.59■□□□□ 0.57
HERC3-214ENST00000601319 DSTYKQ6XUX3 929 aa18.59■□□□□ 0.57
HERC3-214ENST00000601319 C12orf56Q8IXR9 622 aa18.59■□□□□ 0.57
HERC3-214ENST00000601319 TCEAL8Q8IYN2 117 aa18.59■□□□□ 0.57
HERC3-214ENST00000601319 ZNF560Q96MR9 790 aa18.59■□□□□ 0.57
HERC3-214ENST00000601319 LRFN3Q9BTN0 628 aa18.59■□□□□ 0.57
HERC3-214ENST00000601319 EXOC1Q9NV70 894 aa18.59■□□□□ 0.57
HERC3-214ENST00000601319 HSPBP1Q9NZL4 362 aa18.59■□□□□ 0.57
HERC3-214ENST00000601319 GOLGA8IPA6NC78 632 aa18.58■□□□□ 0.56
HERC3-214ENST00000601319 OR6C75A6NL08 312 aa18.58■□□□□ 0.56
HERC3-214ENST00000601319 GOLGA8JA6NMD2 632 aa18.58■□□□□ 0.56
HERC3-214ENST00000601319 SPTLC1O15269 473 aa18.58■□□□□ 0.56
HERC3-214ENST00000601319 CYP11A1P05108 521 aa18.58■□□□□ 0.56
HERC3-214ENST00000601319 PNPLA4P41247 253 aa18.58■□□□□ 0.56
HERC3-214ENST00000601319 TAF6P49848 677 aa18.58■□□□□ 0.56
HERC3-214ENST00000601319 ZXDAP98168 799 aa18.58■□□□□ 0.56
HERC3-214ENST00000601319 PSMD2Q13200 908 aa18.58■□□□□ 0.56
HERC3-214ENST00000601319 HS2ST1Q7LGA3 356 aa18.58■□□□□ 0.56
HERC3-214ENST00000601319 USP37Q86T82 979 aa18.58■□□□□ 0.56
HERC3-214ENST00000601319 FSIP1Q8NA03 581 aa18.58■□□□□ 0.56
HERC3-214ENST00000601319 CACTINQ8WUQ7 758 aaKnown RBP18.58■□□□□ 0.56
HERC3-214ENST00000601319 SENP8Q96LD8 212 aa18.58■□□□□ 0.56
HERC3-214ENST00000601319 PCIF1Q9H4Z3 704 aa18.58■□□□□ 0.56
HERC3-214ENST00000601319 SLC39A2Q9NP94 309 aa18.58■□□□□ 0.56
HERC3-214ENST00000601319 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.58■□□□□ 0.56
HERC3-214ENST00000601319 EPS15L1Q9UBC2 864 aa18.58■□□□□ 0.56
HERC3-214ENST00000601319 ITGA11Q9UKX5 1188 aa18.58■□□□□ 0.56
HERC3-214ENST00000601319 DSEQ9UL01 958 aa18.58■□□□□ 0.56
HERC3-214ENST00000601319 SORCS3Q9UPU3 1222 aa18.58■□□□□ 0.56
HERC3-214ENST00000601319 ZNF318Q5VUA4 2279 aa18.58■□□□□ 0.56
HERC3-214ENST00000601319 FAM86C2PA6NEL3 165 aa18.57■□□□□ 0.56
HERC3-214ENST00000601319 ZNF233A6NK53 670 aa18.57■□□□□ 0.56
HERC3-214ENST00000601319 N4BP1O75113 896 aaKnown RBP18.57■□□□□ 0.56
HERC3-214ENST00000601319 C1QBPQ07021 282 aaKnown RBP18.57■□□□□ 0.56
HERC3-214ENST00000601319 MTMR3Q13615 1198 aa18.57■□□□□ 0.56
HERC3-214ENST00000601319 SURF1Q15526 300 aa18.57■□□□□ 0.56
HERC3-214ENST00000601319 SV2CQ496J9 727 aa18.57■□□□□ 0.56
HERC3-214ENST00000601319 OVOS1Q6IE37 1185 aa18.57■□□□□ 0.56
HERC3-214ENST00000601319 UBALD2Q8IYN6 164 aa18.57■□□□□ 0.56
HERC3-214ENST00000601319 LRRC52Q8N7C0 313 aa18.57■□□□□ 0.56
HERC3-214ENST00000601319 KIAA0895Q8NCT3 520 aa18.57■□□□□ 0.56
HERC3-214ENST00000601319 GOLGA5Q8TBA6 731 aa18.57■□□□□ 0.56
HERC3-214ENST00000601319 GOLPH3LQ9H4A5 285 aa18.57■□□□□ 0.56
HERC3-214ENST00000601319 AFF4Q9UHB7 1163 aaKnown RBP18.57■□□□□ 0.56
HERC3-214ENST00000601319 ZFP37Q9Y6Q3 630 aaPredicted RBP18.57■□□□□ 0.56
HERC3-214ENST00000601319 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.56■□□□□ 0.56
HERC3-214ENST00000601319 PRRG1O14668 218 aa18.56■□□□□ 0.56
HERC3-214ENST00000601319 CCL16O15467 120 aa18.56■□□□□ 0.56
HERC3-214ENST00000601319 CPB1P15086 417 aa18.56■□□□□ 0.56
HERC3-214ENST00000601319 TFAMQ00059 246 aaKnown RBP18.56■□□□□ 0.56
HERC3-214ENST00000601319 SIGLEC14Q08ET2 396 aa18.56■□□□□ 0.56
HERC3-214ENST00000601319 MYBPC2Q14324 1141 aa18.56■□□□□ 0.56
HERC3-214ENST00000601319 SNRNP35Q16560 246 aaKnown RBP18.56■□□□□ 0.56
HERC3-214ENST00000601319 KNOP1Q1ED39 458 aaKnown RBP18.56■□□□□ 0.56
HERC3-214ENST00000601319 KMT5BQ4FZB7 885 aa18.56■□□□□ 0.56
HERC3-214ENST00000601319 KRBA2Q6ZNG9 492 aa18.56■□□□□ 0.56
HERC3-214ENST00000601319 TRIM67Q6ZTA4 783 aa18.56■□□□□ 0.56
HERC3-214ENST00000601319 CBWD2Q8IUF1 395 aa18.56■□□□□ 0.56
HERC3-214ENST00000601319 NELFCDQ8IXH7 590 aa18.56■□□□□ 0.56
HERC3-214ENST00000601319 C1orf127Q8N9H9 656 aa18.56■□□□□ 0.56
HERC3-214ENST00000601319 CXorf38Q8TB03 319 aa18.56■□□□□ 0.56
HERC3-214ENST00000601319 TMEM174Q8WUU8 243 aa18.56■□□□□ 0.56
HERC3-214ENST00000601319 GDPD2Q9HCC8 539 aa18.56■□□□□ 0.56
HERC3-214ENST00000601319 PDE11AQ9HCR9 933 aa18.56■□□□□ 0.56
HERC3-214ENST00000601319 TIMM13Q9Y5L4 95 aaPredicted RBP18.56■□□□□ 0.56
HERC3-214ENST00000601319 INSL5Q9Y5Q6 135 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms