RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	PABPC4L	P0CB38	370 aa	Known RBP	12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	ADRA2B	P18089	450 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	FOXN2	P32314	431 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	ZNF76	P36508	570 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	FMO1	Q01740	532 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	DSG1	Q02413	1049 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	ITPK1	Q13572	414 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	LAMB3	Q13751	1172 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	MPP2	Q14168	576 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	LRRC14	Q15048	493 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	DLGAP5	Q15398	846 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	CTC1	Q2NKJ3	1217 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	TMEM259	Q4ZIN3	620 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	TMEM179	Q6ZVK1	233 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	ACAD11	Q709F0	780 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	RDM1	Q8NG50	284 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	MGARP	Q8TDB4	240 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	STON2	Q8WXE9	905 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	PRCC	Q92733	491 aa	Predicted RBP	12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	DDX17	Q92841	729 aa	Known RBP	12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	DDX27	Q96GQ7	796 aa	Known RBP	12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	C7orf26	Q96N11	449 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	DDX23	Q9BUQ8	820 aa	Known RBP	12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	RUSC1	Q9BVN2	902 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	COA1	Q9GZY4	146 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	MTFR1L	Q9H019	292 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	ASCC2	Q9H1I8	757 aa	Predicted RBP	12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	GPCPD1	Q9NPB8	672 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	MRGBP	Q9NV56	204 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	ATXN10	Q9UBB4	475 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	IP6K2	Q9UHH9	426 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	GGA1	Q9UJY5	639 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	ITGB1BP2	Q9UKP3	347 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	TBC1D30	Q9Y2I9	924 aa		12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	XIRP1	Q702N8	1843 aa	Known RBP	12.41	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	EMSY	Q7Z589	1322 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236		E7ESA3	106 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	C6orf229	H3BNL8	230 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	CLIC2	O15247	247 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	CLDN3	O15551	220 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	STK10	O94804	968 aa	Known RBP	12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	SLITRK3	O94933	977 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	DHRS4L1	P0CG22	281 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	RARB	P10826	455 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	ESRRA	P11474	423 aa	Predicted RBP	12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	PLS3	P13797	630 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	CHRNB2	P17787	502 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	KCNA3	P22001	575 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	RGS2	P41220	211 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	ARFIP2	P53365	341 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	ARL4C	P56559	192 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	RTP1	P59025	263 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	ARHGAP44	Q17R89	818 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	TRIM68	Q6AZZ1	485 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	B3GNT9	Q6UX72	402 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	POLN	Q7Z5Q5	900 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	PHF13	Q86YI8	300 aa	Predicted RBP	12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	MCOLN2	Q8IZK6	566 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	ZDHHC14	Q8IZN3	488 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	LRRC43	Q8N309	656 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	ANKLE1	Q8NAG6	615 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	CATSPER1	Q8NEC5	780 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	FBXL13	Q8NEE6	735 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	GDAP1	Q8TB36	358 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	RNF217	Q8TC41	542 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	SCG3	Q8WXD2	468 aa	Known RBP	12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	SKA1	Q96BD8	255 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	ZBTB10	Q96DT7	871 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	MTBP	Q96DY7	904 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	FBXL18	Q96ME1	805 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	SYT15	Q9BQS2	421 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	ZNF518B	Q9C0D4	1074 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	WWP1	Q9H0M0	922 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236		Q9H521	79 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	ACSS3	Q9H6R3	686 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	DLGAP2	Q9P1A6	1054 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	HAO1	Q9UJM8	370 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	PTPN22	Q9Y2R2	807 aa		12.4	□□□□□ -0.42
U2AF1L4-221	ENST00000601236	FRMPD2	Q68DX3	1309 aa	Predicted RBP	12.39	□□□□□ -0.43
U2AF1L4-221	ENST00000601236	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	12.39	□□□□□ -0.43
U2AF1L4-221	ENST00000601236	USP17L10	C9JJH3	530 aa		12.39	□□□□□ -0.43
U2AF1L4-221	ENST00000601236	RNF8	O76064	485 aa		12.39	□□□□□ -0.43
U2AF1L4-221	ENST00000601236	TOMM70	O94826	608 aa		12.39	□□□□□ -0.43
U2AF1L4-221	ENST00000601236	LSM8	O95777	96 aa	Known RBP	12.39	□□□□□ -0.43
U2AF1L4-221	ENST00000601236	WEE2	P0C1S8	567 aa		12.39	□□□□□ -0.43
U2AF1L4-221	ENST00000601236	CCDC166	P0CW27	439 aa		12.39	□□□□□ -0.43
U2AF1L4-221	ENST00000601236	UNG	P13051	313 aa	Predicted RBP	12.39	□□□□□ -0.43
U2AF1L4-221	ENST00000601236	ACAT1	P24752	427 aa	Known RBP	12.39	□□□□□ -0.43
U2AF1L4-221	ENST00000601236	TARS	P26639	723 aa	Known RBP	12.39	□□□□□ -0.43
U2AF1L4-221	ENST00000601236	NSF	P46459	744 aa	Known RBP	12.39	□□□□□ -0.43
U2AF1L4-221	ENST00000601236	CDK7	P50613	346 aa		12.39	□□□□□ -0.43
U2AF1L4-221	ENST00000601236	CACNA2D1	P54289	1103 aa		12.39	□□□□□ -0.43
U2AF1L4-221	ENST00000601236	ASPH	Q12797	758 aa		12.39	□□□□□ -0.43
U2AF1L4-221	ENST00000601236	DNAJC3	Q13217	504 aa		12.39	□□□□□ -0.43
U2AF1L4-221	ENST00000601236	RCN2	Q14257	317 aa		12.39	□□□□□ -0.43
U2AF1L4-221	ENST00000601236	TMED2	Q15363	201 aa		12.39	□□□□□ -0.43
U2AF1L4-221	ENST00000601236	GNPTAB	Q3T906	1256 aa		12.39	□□□□□ -0.43
U2AF1L4-221	ENST00000601236	TAF1B	Q53T94	588 aa	Predicted RBP	12.39	□□□□□ -0.43
U2AF1L4-221	ENST00000601236	TMEM63B	Q5T3F8	832 aa		12.39	□□□□□ -0.43
U2AF1L4-221	ENST00000601236	DPP8	Q6V1X1	898 aa	Predicted RBP	12.39	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms