RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 FIGNQ5HY92 759 aa24.63■■□□□ 1.53
IRF3-227ENST00000600911 LRRC52Q8N7C0 313 aa24.63■■□□□ 1.53
IRF3-227ENST00000600911 GDF15Q99988 308 aa24.63■■□□□ 1.53
IRF3-227ENST00000600911 MARCH5Q9NX47 278 aa24.63■■□□□ 1.53
IRF3-227ENST00000600911 CEP72Q9P209 647 aa24.63■■□□□ 1.53
IRF3-227ENST00000600911 KANSL3Q9P2N6 904 aa24.63■■□□□ 1.53
IRF3-227ENST00000600911 PRG3Q9Y2Y8 225 aaPredicted RBP24.63■■□□□ 1.53
IRF3-227ENST00000600911 NME7Q9Y5B8 376 aa24.63■■□□□ 1.53
IRF3-227ENST00000600911 MRPL42Q9Y6G3 142 aaKnown RBP24.63■■□□□ 1.53
IRF3-227ENST00000600911 SLC4A7Q9Y6M7 1214 aa24.63■■□□□ 1.53
IRF3-227ENST00000600911 LCHNA4D1U4 455 aa24.62■■□□□ 1.53
IRF3-227ENST00000600911 GRXCR1A8MXD5 290 aa24.62■■□□□ 1.53
IRF3-227ENST00000600911 CLSTN1O94985 981 aa24.62■■□□□ 1.53
IRF3-227ENST00000600911 STAU1O95793 577 aaKnown RBP24.62■■□□□ 1.53
IRF3-227ENST00000600911 LINC00271P0C7V0 271 aa24.62■■□□□ 1.53
IRF3-227ENST00000600911 OR1G1P47890 313 aa24.62■■□□□ 1.53
IRF3-227ENST00000600911 JAM2P57087 298 aa24.62■■□□□ 1.53
IRF3-227ENST00000600911 HTRA4P83105 476 aaPredicted RBP24.62■■□□□ 1.53
IRF3-227ENST00000600911 WDR44Q5JSH3 913 aa24.62■■□□□ 1.53
IRF3-227ENST00000600911 HERC6Q8IVU3 1022 aa24.62■■□□□ 1.53
IRF3-227ENST00000600911 LRRC43Q8N309 656 aa24.62■■□□□ 1.53
IRF3-227ENST00000600911 UBR7Q8N806 425 aa24.62■■□□□ 1.53
IRF3-227ENST00000600911 TC2NQ8N9U0 490 aa24.62■■□□□ 1.53
IRF3-227ENST00000600911 PPP1R9BQ96SB3 815 aa24.62■■□□□ 1.53
IRF3-227ENST00000600911 CAPN11Q9UMQ6 739 aa24.62■■□□□ 1.53
IRF3-227ENST00000600911 NRP1O14786 923 aa24.61■■□□□ 1.53
IRF3-227ENST00000600911 ARHGEF15O94989 841 aa24.61■■□□□ 1.53
IRF3-227ENST00000600911 CALCAP01258 141 aa24.61■■□□□ 1.53
IRF3-227ENST00000600911 ATICP31939 592 aa24.61■■□□□ 1.53
IRF3-227ENST00000600911 RGS19P49795 217 aa24.61■■□□□ 1.53
IRF3-227ENST00000600911 RABGGTBP53611 331 aa24.61■■□□□ 1.53
IRF3-227ENST00000600911 CUL2Q13617 745 aa24.61■■□□□ 1.53
IRF3-227ENST00000600911 RAPGEF1Q13905 1077 aa24.61■■□□□ 1.53
IRF3-227ENST00000600911 NIF3L1Q9GZT8 377 aa24.61■■□□□ 1.53
IRF3-227ENST00000600911 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.61■■□□□ 1.533e-7■■■□□ 15.9
IRF3-227ENST00000600911 SNX9Q9Y5X1 595 aa24.61■■□□□ 1.53
IRF3-227ENST00000600911 NLRC5Q86WI3 1866 aa24.61■■□□□ 1.53
IRF3-227ENST00000600911 LRRC53A6NM62 1247 aa24.61■■□□□ 1.53
IRF3-227ENST00000600911 HCRTO43612 131 aa24.61■■□□□ 1.53
IRF3-227ENST00000600911 MFAP3LO75121 409 aa24.61■■□□□ 1.53
IRF3-227ENST00000600911 WEE2P0C1S8 567 aa24.61■■□□□ 1.53
IRF3-227ENST00000600911 ACO1P21399 889 aaKnown RBP24.61■■□□□ 1.53
IRF3-227ENST00000600911 RPL9P32969 192 aaKnown RBP24.61■■□□□ 1.53
IRF3-227ENST00000600911 TAF6P49848 677 aa24.61■■□□□ 1.53
IRF3-227ENST00000600911 DRAP1Q14919 205 aaPredicted RBP24.61■■□□□ 1.53
IRF3-227ENST00000600911 TIGD5Q53EQ6 642 aa24.61■■□□□ 1.53
IRF3-227ENST00000600911 ZNF667Q5HYK9 610 aa24.61■■□□□ 1.53
IRF3-227ENST00000600911 CCDC186Q7Z3E2 898 aa24.61■■□□□ 1.53
IRF3-227ENST00000600911 SPRED2Q7Z698 418 aa24.61■■□□□ 1.53
IRF3-227ENST00000600911 MRPL9Q9BYD2 267 aaKnown RBP24.61■■□□□ 1.53
IRF3-227ENST00000600911 FBXL5Q9UKA1 691 aa24.61■■□□□ 1.53
IRF3-227ENST00000600911 KPNA7A9QM74 516 aa24.6■■□□□ 1.53
IRF3-227ENST00000600911 GALTP07902 379 aa24.6■■□□□ 1.53
IRF3-227ENST00000600911 MYOGP15173 224 aa24.6■■□□□ 1.53
IRF3-227ENST00000600911 ATP2A2P16615 1042 aaKnown RBP24.6■■□□□ 1.53
IRF3-227ENST00000600911 PDXDC1Q6P996 788 aa24.6■■□□□ 1.53
IRF3-227ENST00000600911 FAM193BQ96PV7 902 aaPredicted RBP24.6■■□□□ 1.53
IRF3-227ENST00000600911 YME1L1Q96TA2 773 aa24.6■■□□□ 1.53
IRF3-227ENST00000600911 NUP58Q9BVL2 599 aa24.6■■□□□ 1.53
IRF3-227ENST00000600911 BCO2Q9BYV7 579 aa24.6■■□□□ 1.53
IRF3-227ENST00000600911 IMPG2Q9BZV3 1241 aa24.6■■□□□ 1.53
IRF3-227ENST00000600911 HMGXB4Q9UGU5 601 aa24.6■■□□□ 1.53
IRF3-227ENST00000600911 A0A1W2PQJ5 194 aa24.59■■□□□ 1.53
IRF3-227ENST00000600911 FOXN3O00409 490 aaPredicted RBP24.59■■□□□ 1.53
IRF3-227ENST00000600911 B3GAT3O94766 335 aa24.59■■□□□ 1.53
IRF3-227ENST00000600911 AARSP49588 968 aaKnown RBP eCLIP24.59■■□□□ 1.53
IRF3-227ENST00000600911 BCAR1P56945 870 aa24.59■■□□□ 1.53
IRF3-227ENST00000600911 GCNT1Q02742 428 aa24.59■■□□□ 1.53
IRF3-227ENST00000600911 BTG3Q14201 252 aaPredicted RBP24.59■■□□□ 1.53
IRF3-227ENST00000600911 CMTR2Q8IYT2 770 aaKnown RBP24.59■■□□□ 1.53
IRF3-227ENST00000600911 TAF4BQ92750 862 aa24.59■■□□□ 1.53
IRF3-227ENST00000600911 ZNF560Q96MR9 790 aa24.59■■□□□ 1.53
IRF3-227ENST00000600911 UROC1Q96N76 676 aa24.59■■□□□ 1.53
IRF3-227ENST00000600911 SLC9A7Q96T83 725 aa24.59■■□□□ 1.53
IRF3-227ENST00000600911 MRPL45Q9BRJ2 306 aaKnown RBP24.59■■□□□ 1.53
IRF3-227ENST00000600911 ACP6Q9NPH0 428 aa24.59■■□□□ 1.53
IRF3-227ENST00000600911 RNF216Q9NWF9 866 aaPredicted RBP24.59■■□□□ 1.53
IRF3-227ENST00000600911 L1RE1Q9UN81 338 aa24.59■■□□□ 1.53
IRF3-227ENST00000600911 F8VZ95 297 aa24.58■■□□□ 1.53
IRF3-227ENST00000600911 KRT9P35527 623 aa24.58■■□□□ 1.53
IRF3-227ENST00000600911 MYO1EQ12965 1108 aa24.58■■□□□ 1.53
IRF3-227ENST00000600911 SOWAHAQ2M3V2 549 aa24.58■■□□□ 1.53
IRF3-227ENST00000600911 PPFIBP1Q86W92 1011 aa24.58■■□□□ 1.53
IRF3-227ENST00000600911 SHC3Q92529 594 aa24.58■■□□□ 1.53
IRF3-227ENST00000600911 ANP32BQ92688 251 aaKnown RBP24.58■■□□□ 1.53
IRF3-227ENST00000600911 RNPC3Q96LT9 517 aaKnown RBP24.58■■□□□ 1.53
IRF3-227ENST00000600911 TIMM13Q9Y5L4 95 aaPredicted RBP24.58■■□□□ 1.53
IRF3-227ENST00000600911 PDE4DIPQ5VU43 2346 aa24.58■■□□□ 1.53
IRF3-227ENST00000600911 PLXNA4Q9HCM2 1894 aa24.57■■□□□ 1.52
IRF3-227ENST00000600911 CD58P19256 250 aa24.57■■□□□ 1.52
IRF3-227ENST00000600911 CCDC173Q0VFZ6 552 aa24.57■■□□□ 1.52
IRF3-227ENST00000600911 ORC1Q13415 861 aa24.57■■□□□ 1.52
IRF3-227ENST00000600911 SV2CQ496J9 727 aa24.57■■□□□ 1.52
IRF3-227ENST00000600911 DCLRE1AQ6PJP8 1040 aa24.57■■□□□ 1.52
IRF3-227ENST00000600911 CACNA2D4Q7Z3S7 1137 aa24.57■■□□□ 1.52
IRF3-227ENST00000600911 LIMS2Q7Z4I7 341 aa24.57■■□□□ 1.52
IRF3-227ENST00000600911 OSTM1Q86WC4 334 aa24.57■■□□□ 1.52
IRF3-227ENST00000600911 KBTBD7Q8WVZ9 684 aa24.57■■□□□ 1.52
IRF3-227ENST00000600911 DDX27Q96GQ7 796 aaKnown RBP24.57■■□□□ 1.52
IRF3-227ENST00000600911 SENP8Q96LD8 212 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms