RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 MYO1EQ12965 1108 aa13.6□□□□□ -0.23
CHMP2A-206ENST00000600118 EXOC3L4Q17RC7 722 aa13.6□□□□□ -0.23
CHMP2A-206ENST00000600118 ZNF699Q32M78 642 aa13.6□□□□□ -0.23
CHMP2A-206ENST00000600118 SV2CQ496J9 727 aa13.6□□□□□ -0.23
CHMP2A-206ENST00000600118 TIGD5Q53EQ6 642 aa13.6□□□□□ -0.23
CHMP2A-206ENST00000600118 GBP6Q6ZN66 633 aa13.6□□□□□ -0.23
CHMP2A-206ENST00000600118 TIFAQ96CG3 184 aa13.6□□□□□ -0.23
CHMP2A-206ENST00000600118 FAXDC2Q96IV6 333 aa13.6□□□□□ -0.23
CHMP2A-206ENST00000600118 SUSD3Q96L08 255 aa13.6□□□□□ -0.23
CHMP2A-206ENST00000600118 ERGIC2Q96RQ1 377 aa13.6□□□□□ -0.23
CHMP2A-206ENST00000600118 CRACR2AQ9BSW2 395 aa13.6□□□□□ -0.23
CHMP2A-206ENST00000600118 PI4K2AQ9BTU6 479 aa13.6□□□□□ -0.23
CHMP2A-206ENST00000600118 INTS2Q9H0H0 1204 aaKnown RBP13.6□□□□□ -0.23
CHMP2A-206ENST00000600118 GCNT4Q9P109 453 aa13.6□□□□□ -0.23
CHMP2A-206ENST00000600118 FSD2A1L4K1 749 aa13.59□□□□□ -0.23
CHMP2A-206ENST00000600118 TADA2AO75478 443 aa13.59□□□□□ -0.23
CHMP2A-206ENST00000600118 FGF18O76093 207 aa13.59□□□□□ -0.23
CHMP2A-206ENST00000600118 SLC9A1P19634 815 aa13.59□□□□□ -0.23
CHMP2A-206ENST00000600118 CTNNB1P35222 781 aa13.59□□□□□ -0.23
CHMP2A-206ENST00000600118 PBX1P40424 430 aa13.59□□□□□ -0.23
CHMP2A-206ENST00000600118 UBASH3AP57075 661 aa13.59□□□□□ -0.23
CHMP2A-206ENST00000600118 NOP14P78316 857 aaKnown RBP13.59□□□□□ -0.23
CHMP2A-206ENST00000600118 UBXN1Q04323 297 aa13.59□□□□□ -0.23
CHMP2A-206ENST00000600118 FILIP1LQ4L180 1135 aa13.59□□□□□ -0.23
CHMP2A-206ENST00000600118 FKBP15Q5T1M5 1219 aa13.59□□□□□ -0.23
CHMP2A-206ENST00000600118 PPP2R2DQ66LE6 453 aa13.59□□□□□ -0.23
CHMP2A-206ENST00000600118 SPOPLQ6IQ16 392 aa13.59□□□□□ -0.23
CHMP2A-206ENST00000600118 FUT10Q6P4F1 479 aa13.59□□□□□ -0.23
CHMP2A-206ENST00000600118 TRIM65Q6PJ69 517 aa13.59□□□□□ -0.23
CHMP2A-206ENST00000600118 KLHL23Q8NBE8 558 aa13.59□□□□□ -0.23
CHMP2A-206ENST00000600118 HASPINQ8TF76 798 aa13.59□□□□□ -0.23
CHMP2A-206ENST00000600118 ELMO3Q96BJ8 720 aa13.59□□□□□ -0.23
CHMP2A-206ENST00000600118 TMEM169Q96HH4 297 aa13.59□□□□□ -0.23
CHMP2A-206ENST00000600118 SENP8Q96LD8 212 aa13.59□□□□□ -0.23
CHMP2A-206ENST00000600118 GPR62Q9BZJ7 368 aa13.59□□□□□ -0.23
CHMP2A-206ENST00000600118 SLC28A3Q9HAS3 691 aa13.59□□□□□ -0.23
CHMP2A-206ENST00000600118 SIX2Q9NPC8 291 aa13.59□□□□□ -0.23
CHMP2A-206ENST00000600118 IFNKQ9P0W0 207 aa13.59□□□□□ -0.23
CHMP2A-206ENST00000600118 SIK3Q9Y2K2 1263 aa13.59□□□□□ -0.23
CHMP2A-206ENST00000600118 R3HCC1Q9Y3T6 440 aaKnown RBP13.59□□□□□ -0.23
CHMP2A-206ENST00000600118 NUB1Q9Y5A7 615 aa13.59□□□□□ -0.23
CHMP2A-206ENST00000600118 SF3B1O75533 1304 aaKnown RBP eCLIP13.59□□□□□ -0.232e-6■■■■■ 55.7
CHMP2A-206ENST00000600118 TDRD15B5MCY1 1934 aaKnown RBP13.58□□□□□ -0.23
CHMP2A-206ENST00000600118 A0A1W2PQC6 194 aa13.58□□□□□ -0.24
CHMP2A-206ENST00000600118 I3L4J1 428 aa13.58□□□□□ -0.24
CHMP2A-206ENST00000600118 PES1O00541 588 aaKnown RBP13.58□□□□□ -0.24
CHMP2A-206ENST00000600118 TRAPPC3O43617 180 aa13.58□□□□□ -0.24
CHMP2A-206ENST00000600118 FGFR3P22607 806 aa13.58□□□□□ -0.24
CHMP2A-206ENST00000600118 ASPAP45381 313 aa13.58□□□□□ -0.24
CHMP2A-206ENST00000600118 ELAVL2Q12926 359 aaKnown RBP13.58□□□□□ -0.24
CHMP2A-206ENST00000600118 SYCP1Q15431 976 aa13.58□□□□□ -0.24
CHMP2A-206ENST00000600118 WDR72Q3MJ13 1102 aa13.58□□□□□ -0.24
CHMP2A-206ENST00000600118 ZNF667Q5HYK9 610 aa13.58□□□□□ -0.24
CHMP2A-206ENST00000600118 WDR44Q5JSH3 913 aa13.58□□□□□ -0.24
CHMP2A-206ENST00000600118 TAS1R1Q7RTX1 841 aa13.58□□□□□ -0.24
CHMP2A-206ENST00000600118 DDX53Q86TM3 631 aaKnown RBP13.58□□□□□ -0.24
CHMP2A-206ENST00000600118 CCDC150Q8NCX0 1101 aa13.58□□□□□ -0.24
CHMP2A-206ENST00000600118 TATDN2Q93075 761 aa13.58□□□□□ -0.24
CHMP2A-206ENST00000600118 BCO2Q9BYV7 579 aa13.58□□□□□ -0.24
CHMP2A-206ENST00000600118 IMPG2Q9BZV3 1241 aa13.58□□□□□ -0.24
CHMP2A-206ENST00000600118 XPO4Q9C0E2 1151 aaKnown RBP13.58□□□□□ -0.24
CHMP2A-206ENST00000600118 NIF3L1Q9GZT8 377 aa13.58□□□□□ -0.24
CHMP2A-206ENST00000600118 PLCB1Q9NQ66 1216 aa13.58□□□□□ -0.24
CHMP2A-206ENST00000600118 CHST7Q9NS84 486 aa13.58□□□□□ -0.24
CHMP2A-206ENST00000600118 STK39Q9UEW8 545 aa13.58□□□□□ -0.24
CHMP2A-206ENST00000600118 PCDHB8Q9UN66 801 aa13.58□□□□□ -0.24
CHMP2A-206ENST00000600118 POLIQ9UNA4 740 aa13.58□□□□□ -0.24
CHMP2A-206ENST00000600118 LZTS1Q9Y250 596 aa13.58□□□□□ -0.24
CHMP2A-206ENST00000600118 SNX9Q9Y5X1 595 aa13.58□□□□□ -0.24
CHMP2A-206ENST00000600118 TMEM265A0A087WTH1 108 aa13.57□□□□□ -0.24
CHMP2A-206ENST00000600118 CYB561D2O14569 222 aa13.57□□□□□ -0.24
CHMP2A-206ENST00000600118 SYN3O14994 580 aa13.57□□□□□ -0.24
CHMP2A-206ENST00000600118 SOD2P04179 222 aa13.57□□□□□ -0.24
CHMP2A-206ENST00000600118 CYP11A1P05108 521 aa13.57□□□□□ -0.24
CHMP2A-206ENST00000600118 FAM163BP0C2L3 166 aa13.57□□□□□ -0.24
CHMP2A-206ENST00000600118 TYMPP19971 482 aa13.57□□□□□ -0.24
CHMP2A-206ENST00000600118 APBA1Q02410 837 aa13.57□□□□□ -0.24
CHMP2A-206ENST00000600118 SOWAHAQ2M3V2 549 aa13.57□□□□□ -0.24
CHMP2A-206ENST00000600118 PHLDB3Q6NSJ2 640 aa13.57□□□□□ -0.24
CHMP2A-206ENST00000600118 DSTYKQ6XUX3 929 aa13.57□□□□□ -0.24
CHMP2A-206ENST00000600118 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.57□□□□□ -0.24
CHMP2A-206ENST00000600118 DPH6Q7L8W6 267 aa13.57□□□□□ -0.24
CHMP2A-206ENST00000600118 GPR65Q8IYL9 337 aa13.57□□□□□ -0.24
CHMP2A-206ENST00000600118 TOP6BLQ8N6T0 577 aa13.57□□□□□ -0.24
CHMP2A-206ENST00000600118 SPPL3Q8TCT6 385 aa13.57□□□□□ -0.24
CHMP2A-206ENST00000600118 NT5C1BQ96P26 610 aa13.57□□□□□ -0.24
CHMP2A-206ENST00000600118 C11orf84Q9BUA3 381 aaPredicted RBP13.57□□□□□ -0.24
CHMP2A-206ENST00000600118 HERC2P3Q9BVR0 1158 aa13.57□□□□□ -0.24
CHMP2A-206ENST00000600118 SDCBP2Q9H190 292 aa13.57□□□□□ -0.24
CHMP2A-206ENST00000600118 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.57□□□□□ -0.24
CHMP2A-206ENST00000600118 NXF1Q9UBU9 619 aaKnown RBP13.57□□□□□ -0.24
CHMP2A-206ENST00000600118 MTUS1Q9ULD2 1270 aa13.57□□□□□ -0.24
CHMP2A-206ENST00000600118 TRIOBPQ9H2D6 2365 aa13.57□□□□□ -0.24
CHMP2A-206ENST00000600118 CHD9Q3L8U1 2897 aa13.56□□□□□ -0.24
CHMP2A-206ENST00000600118 H3BNC9 293 aa13.56□□□□□ -0.24
CHMP2A-206ENST00000600118 SOX1O00570 391 aaPredicted RBP13.56□□□□□ -0.24
CHMP2A-206ENST00000600118 CBFA2T2O43439 604 aa13.56□□□□□ -0.24
CHMP2A-206ENST00000600118 TACC1O75410 805 aa13.56□□□□□ -0.24
CHMP2A-206ENST00000600118 NOL4O94818 638 aa13.56□□□□□ -0.24
CHMP2A-206ENST00000600118 ODC1P11926 461 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms