RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 UBQLN1Q9UMX0 589 aaKnown RBP13.9□□□□□ -0.18
SH2D3A-208ENST00000599563 EXOC7Q9UPT5 735 aa13.9□□□□□ -0.18
SH2D3A-208ENST00000599563 CLUHO75153 1309 aa13.9□□□□□ -0.19
SH2D3A-208ENST00000599563 UBE4BO95155 1302 aa13.9□□□□□ -0.19
SH2D3A-208ENST00000599563 TRIOO75962 3097 aa13.89□□□□□ -0.19
SH2D3A-208ENST00000599563 TTC26A0AVF1 554 aa13.89□□□□□ -0.19
SH2D3A-208ENST00000599563 TMEM221A6NGB7 291 aa13.89□□□□□ -0.19
SH2D3A-208ENST00000599563 ANKRD63C9JTQ0 380 aa13.89□□□□□ -0.19
SH2D3A-208ENST00000599563 M0R296 226 aa13.89□□□□□ -0.19
SH2D3A-208ENST00000599563 XYLBO75191 536 aa13.89□□□□□ -0.19
SH2D3A-208ENST00000599563 POU2F2P09086 479 aa13.89□□□□□ -0.19
SH2D3A-208ENST00000599563 CXCL8P10145 99 aa13.89□□□□□ -0.19
SH2D3A-208ENST00000599563 SP100P23497 879 aaPredicted RBP13.89□□□□□ -0.19
SH2D3A-208ENST00000599563 PMS1P54277 932 aaKnown RBP13.89□□□□□ -0.19
SH2D3A-208ENST00000599563 SOX4Q06945 474 aaPredicted RBP13.89□□□□□ -0.19
SH2D3A-208ENST00000599563 SASS6Q6UVJ0 657 aa13.89□□□□□ -0.19
SH2D3A-208ENST00000599563 GLYCTKQ8IVS8 523 aa13.89□□□□□ -0.19
SH2D3A-208ENST00000599563 ADSSL1Q8N142 457 aa13.89□□□□□ -0.19
SH2D3A-208ENST00000599563 APPL2Q8NEU8 664 aa13.89□□□□□ -0.19
SH2D3A-208ENST00000599563 OXCT2Q9BYC2 517 aaPredicted RBP13.89□□□□□ -0.19
SH2D3A-208ENST00000599563 HAPLN2Q9GZV7 340 aa13.89□□□□□ -0.19
SH2D3A-208ENST00000599563 RPF1Q9H9Y2 349 aaKnown RBP13.89□□□□□ -0.19
SH2D3A-208ENST00000599563 GOLGA2P5Q9HBQ8 144 aa13.89□□□□□ -0.19
SH2D3A-208ENST00000599563 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.89□□□□□ -0.19
SH2D3A-208ENST00000599563 CDH22Q9UJ99 828 aa13.89□□□□□ -0.19
SH2D3A-208ENST00000599563 CTNND2Q9UQB3 1225 aa13.89□□□□□ -0.19
SH2D3A-208ENST00000599563 ZFP37Q9Y6Q3 630 aaPredicted RBP13.89□□□□□ -0.19
SH2D3A-208ENST00000599563 ZNF318Q5VUA4 2279 aa13.88□□□□□ -0.19
SH2D3A-208ENST00000599563 DOCK8Q8NF50 2099 aa13.88□□□□□ -0.19
SH2D3A-208ENST00000599563 ARHGEF37A1IGU5 675 aa13.88□□□□□ -0.19
SH2D3A-208ENST00000599563 TGFB1I1O43294 461 aa13.88□□□□□ -0.19
SH2D3A-208ENST00000599563 RFPL2O75678 378 aa13.88□□□□□ -0.19
SH2D3A-208ENST00000599563 SPATA31D3P0C874 917 aa13.88□□□□□ -0.19
SH2D3A-208ENST00000599563 OR1D2P34982 312 aa13.88□□□□□ -0.19
SH2D3A-208ENST00000599563 STX17P56962 302 aa13.88□□□□□ -0.19
SH2D3A-208ENST00000599563 STX1AQ16623 288 aa13.88□□□□□ -0.19
SH2D3A-208ENST00000599563 COBLL1Q53SF7 1204 aa13.88□□□□□ -0.19
SH2D3A-208ENST00000599563 PPM1LQ5SGD2 360 aa13.88□□□□□ -0.19
SH2D3A-208ENST00000599563 KLHL10Q6JEL2 608 aa13.88□□□□□ -0.19
SH2D3A-208ENST00000599563 SPATA31D4Q6ZUB0 917 aa13.88□□□□□ -0.19
SH2D3A-208ENST00000599563 SUGP1Q8IWZ8 645 aaKnown RBP13.88□□□□□ -0.19
SH2D3A-208ENST00000599563 GUF1Q8N442 669 aaKnown RBP13.88□□□□□ -0.19
SH2D3A-208ENST00000599563 ZSWIM2Q8NEG5 633 aa13.88□□□□□ -0.19
SH2D3A-208ENST00000599563 NXPE3Q969Y0 559 aa13.88□□□□□ -0.19
SH2D3A-208ENST00000599563 PBXIP1Q96AQ6 731 aa13.88□□□□□ -0.19
SH2D3A-208ENST00000599563 KIF12Q96FN5 646 aa13.88□□□□□ -0.19
SH2D3A-208ENST00000599563 SUSD3Q96L08 255 aa13.88□□□□□ -0.19
SH2D3A-208ENST00000599563 MED15Q96RN5 788 aa13.88□□□□□ -0.19
SH2D3A-208ENST00000599563 DNAJC25Q9H1X3 360 aa13.88□□□□□ -0.19
SH2D3A-208ENST00000599563 KCTD10Q9H3F6 313 aa13.88□□□□□ -0.19
SH2D3A-208ENST00000599563 IGSF9Q9P2J2 1179 aa13.88□□□□□ -0.19
SH2D3A-208ENST00000599563 MAFFQ9ULX9 164 aa13.88□□□□□ -0.19
SH2D3A-208ENST00000599563 DERAQ9Y315 318 aa13.88□□□□□ -0.19
SH2D3A-208ENST00000599563 PCDHB13Q9Y5F0 798 aa13.88□□□□□ -0.19
SH2D3A-208ENST00000599563 FAM189A1O60320 539 aa13.87□□□□□ -0.19
SH2D3A-208ENST00000599563 C8AP07357 584 aa13.87□□□□□ -0.19
SH2D3A-208ENST00000599563 ADRB2P07550 413 aa13.87□□□□□ -0.19
SH2D3A-208ENST00000599563 TKTP29401 623 aaKnown RBP13.87□□□□□ -0.19
SH2D3A-208ENST00000599563 LRPAP1P30533 357 aa13.87□□□□□ -0.19
SH2D3A-208ENST00000599563 BRCC3P46736 316 aa13.87□□□□□ -0.19
SH2D3A-208ENST00000599563 ZCWPW2Q504Y3 356 aa13.87□□□□□ -0.19
SH2D3A-208ENST00000599563 SEZ6Q53EL9 994 aa13.87□□□□□ -0.19
SH2D3A-208ENST00000599563 VARS2Q5ST30 1063 aaKnown RBP13.87□□□□□ -0.19
SH2D3A-208ENST00000599563 SLC8B1Q6J4K2 584 aa13.87□□□□□ -0.19
SH2D3A-208ENST00000599563 CD300LGQ6UXG3 332 aa13.87□□□□□ -0.19
SH2D3A-208ENST00000599563 HFE2Q6ZVN8 426 aa13.87□□□□□ -0.19
SH2D3A-208ENST00000599563 STXBP4Q6ZWJ1 553 aa13.87□□□□□ -0.19
SH2D3A-208ENST00000599563 C3orf58Q8NDZ4 430 aa13.87□□□□□ -0.19
SH2D3A-208ENST00000599563 BEST2Q8NFU1 509 aa13.87□□□□□ -0.19
SH2D3A-208ENST00000599563 C18orf25Q96B23 403 aaPredicted RBP13.87□□□□□ -0.19
SH2D3A-208ENST00000599563 ZNF707Q96C28 371 aaPredicted RBP13.87□□□□□ -0.19
SH2D3A-208ENST00000599563 ACCSQ96QU6 501 aa13.87□□□□□ -0.19
SH2D3A-208ENST00000599563 PRRX2Q99811 253 aa13.87□□□□□ -0.19
SH2D3A-208ENST00000599563 ASB7Q9H672 318 aa13.87□□□□□ -0.19
SH2D3A-208ENST00000599563 LIMD1Q9UGP4 676 aa13.87□□□□□ -0.19
SH2D3A-208ENST00000599563 CPSF3Q9UKF6 684 aaKnown RBP13.87□□□□□ -0.19
SH2D3A-208ENST00000599563 CDY1Q9Y6F8 540 aa13.87□□□□□ -0.19
SH2D3A-208ENST00000599563 STYXL1Q9Y6J8 313 aa13.87□□□□□ -0.19
SH2D3A-208ENST00000599563 CLIC2O15247 247 aa13.86□□□□□ -0.19
SH2D3A-208ENST00000599563 GBP2P32456 591 aaPredicted RBP13.86□□□□□ -0.19
SH2D3A-208ENST00000599563 ELF1P32519 619 aa13.86□□□□□ -0.19
SH2D3A-208ENST00000599563 ZBTB6Q15916 424 aa13.86□□□□□ -0.19
SH2D3A-208ENST00000599563 ENOX2Q16206 610 aaKnown RBP13.86□□□□□ -0.19
SH2D3A-208ENST00000599563 KNOP1Q1ED39 458 aaKnown RBP13.86□□□□□ -0.19
SH2D3A-208ENST00000599563 ANO6Q4KMQ2 910 aa13.86□□□□□ -0.19
SH2D3A-208ENST00000599563 TPGS2Q68CL5 300 aa13.86□□□□□ -0.19
SH2D3A-208ENST00000599563 ZNF280DQ6N043 979 aa13.86□□□□□ -0.19
SH2D3A-208ENST00000599563 NT5DC4Q86YG4 428 aa13.86□□□□□ -0.19
SH2D3A-208ENST00000599563 SYCP3Q8IZU3 236 aa13.86□□□□□ -0.19
SH2D3A-208ENST00000599563 FBXL6Q8N531 539 aa13.86□□□□□ -0.19
SH2D3A-208ENST00000599563 ZNF461Q8TAF7 563 aa13.86□□□□□ -0.19
SH2D3A-208ENST00000599563 NELFBQ8WX92 580 aa13.86□□□□□ -0.19
SH2D3A-208ENST00000599563 EPS15L1Q9UBC2 864 aa13.86□□□□□ -0.19
SH2D3A-208ENST00000599563 AGO2Q9UKV8 859 aaKnown RBP13.86□□□□□ -0.19
SH2D3A-208ENST00000599563 PCDHB8Q9UN66 801 aa13.86□□□□□ -0.19
SH2D3A-208ENST00000599563 C2CD2Q9Y426 696 aa13.86□□□□□ -0.19
SH2D3A-208ENST00000599563 MUC6Q6W4X9 2439 aa13.86□□□□□ -0.19
SH2D3A-208ENST00000599563 ZDBF2Q9HCK1 2354 aa13.86□□□□□ -0.19
SH2D3A-208ENST00000599563 LACTBL1A8MY62 500 aa13.85□□□□□ -0.19
SH2D3A-208ENST00000599563 I3L4J1 428 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms