RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 YWHAHQ04917 246 aaPredicted RBP18.04■□□□□ 0.48
USHBP1-208ENST00000598309 CUL4BQ13620 913 aa18.04■□□□□ 0.48
USHBP1-208ENST00000598309 BMT2Q1RMZ1 405 aa18.04■□□□□ 0.48
USHBP1-208ENST00000598309 TPGS2Q68CL5 300 aa18.04■□□□□ 0.48
USHBP1-208ENST00000598309 EFCAB13Q8IY85 973 aa18.04■□□□□ 0.48
USHBP1-208ENST00000598309 GPD1LQ8N335 351 aa18.04■□□□□ 0.48
USHBP1-208ENST00000598309 PAGE5Q96GU1 130 aa18.04■□□□□ 0.48
USHBP1-208ENST00000598309 DPP3Q9NY33 737 aa18.04■□□□□ 0.48
USHBP1-208ENST00000598309 SORCS3Q9UPU3 1222 aa18.04■□□□□ 0.48
USHBP1-208ENST00000598309 ANK1P16157 1881 aa18.03■□□□□ 0.48
USHBP1-208ENST00000598309 WDR27A2RRH5 827 aa18.03■□□□□ 0.48
USHBP1-208ENST00000598309 ODC1P11926 461 aa18.03■□□□□ 0.48
USHBP1-208ENST00000598309 ATF2P15336 505 aa18.03■□□□□ 0.48
USHBP1-208ENST00000598309 CASP1P29466 404 aa18.03■□□□□ 0.48
USHBP1-208ENST00000598309 NUCB2P80303 420 aa18.03■□□□□ 0.48
USHBP1-208ENST00000598309 MTMR3Q13615 1198 aa18.03■□□□□ 0.48
USHBP1-208ENST00000598309 DSTYKQ6XUX3 929 aa18.03■□□□□ 0.48
USHBP1-208ENST00000598309 USP37Q86T82 979 aa18.03■□□□□ 0.48
USHBP1-208ENST00000598309 TCEAL8Q8IYN2 117 aa18.03■□□□□ 0.48
USHBP1-208ENST00000598309 UBALD2Q8IYN6 164 aa18.03■□□□□ 0.48
USHBP1-208ENST00000598309 ZSWIM2Q8NEG5 633 aa18.03■□□□□ 0.48
USHBP1-208ENST00000598309 SCFD1Q8WVM8 642 aa18.03■□□□□ 0.48
USHBP1-208ENST00000598309 EPS15L1Q9UBC2 864 aa18.03■□□□□ 0.48
USHBP1-208ENST00000598309 OR6C75A6NL08 312 aa18.02■□□□□ 0.48
USHBP1-208ENST00000598309 ELF1P32519 619 aa18.02■□□□□ 0.48
USHBP1-208ENST00000598309 SYKP43405 635 aa18.02■□□□□ 0.48
USHBP1-208ENST00000598309 TAF6P49848 677 aa18.02■□□□□ 0.48
USHBP1-208ENST00000598309 SIGLEC14Q08ET2 396 aa18.02■□□□□ 0.48
USHBP1-208ENST00000598309 TRIM67Q6ZTA4 783 aa18.02■□□□□ 0.48
USHBP1-208ENST00000598309 GRAMD1CQ8IYS0 662 aa18.02■□□□□ 0.48
USHBP1-208ENST00000598309 CACTINQ8WUQ7 758 aaKnown RBP18.02■□□□□ 0.48
USHBP1-208ENST00000598309 SENP8Q96LD8 212 aa18.02■□□□□ 0.48
USHBP1-208ENST00000598309 ZNF560Q96MR9 790 aa18.02■□□□□ 0.48
USHBP1-208ENST00000598309 KIAA1586Q9HCI6 787 aa18.02■□□□□ 0.48
USHBP1-208ENST00000598309 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.02■□□□□ 0.48
USHBP1-208ENST00000598309 CGNQ9P2M7 1197 aaKnown RBP18.02■□□□□ 0.48
USHBP1-208ENST00000598309 LIMD1Q9UGP4 676 aa18.02■□□□□ 0.48
USHBP1-208ENST00000598309 AFF4Q9UHB7 1163 aaKnown RBP18.02■□□□□ 0.48
USHBP1-208ENST00000598309 GOLGA8IPA6NC78 632 aa18.01■□□□□ 0.47
USHBP1-208ENST00000598309 GOLGA8JA6NMD2 632 aa18.01■□□□□ 0.47
USHBP1-208ENST00000598309 SPTLC1O15269 473 aa18.01■□□□□ 0.47
USHBP1-208ENST00000598309 CCL16O15467 120 aa18.01■□□□□ 0.47
USHBP1-208ENST00000598309 TGFB1I1O43294 461 aa18.01■□□□□ 0.47
USHBP1-208ENST00000598309 KLRC4O43908 158 aa18.01■□□□□ 0.47
USHBP1-208ENST00000598309 N4BP1O75113 896 aaKnown RBP18.01■□□□□ 0.47
USHBP1-208ENST00000598309 CYP11A1P05108 521 aa18.01■□□□□ 0.47
USHBP1-208ENST00000598309 COL9A1P20849 921 aa18.01■□□□□ 0.47
USHBP1-208ENST00000598309 PNPLA4P41247 253 aa18.01■□□□□ 0.47
USHBP1-208ENST00000598309 ARPP19P56211 112 aa18.01■□□□□ 0.47
USHBP1-208ENST00000598309 WNT7BP56706 349 aa18.01■□□□□ 0.47
USHBP1-208ENST00000598309 TFAMQ00059 246 aaKnown RBP18.01■□□□□ 0.47
USHBP1-208ENST00000598309 OVOS1Q6IE37 1185 aa18.01■□□□□ 0.47
USHBP1-208ENST00000598309 HS2ST1Q7LGA3 356 aa18.01■□□□□ 0.47
USHBP1-208ENST00000598309 PCIF1Q9H4Z3 704 aa18.01■□□□□ 0.47
USHBP1-208ENST00000598309 AGPAT3Q9NRZ7 376 aa18.01■□□□□ 0.47
USHBP1-208ENST00000598309 HSPBP1Q9NZL4 362 aa18.01■□□□□ 0.47
USHBP1-208ENST00000598309 IGSF9Q9P2J2 1179 aa18.01■□□□□ 0.47
USHBP1-208ENST00000598309 DSEQ9UL01 958 aa18.01■□□□□ 0.47
USHBP1-208ENST00000598309 TIMM13Q9Y5L4 95 aaPredicted RBP18.01■□□□□ 0.47
USHBP1-208ENST00000598309 ZFP37Q9Y6Q3 630 aaPredicted RBP18.01■□□□□ 0.47
USHBP1-208ENST00000598309 TECTAO75443 2155 aa18.01■□□□□ 0.47
USHBP1-208ENST00000598309 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18■□□□□ 0.47
USHBP1-208ENST00000598309 TMEM221A6NGB7 291 aa18■□□□□ 0.47
USHBP1-208ENST00000598309 ZNF233A6NK53 670 aa18■□□□□ 0.47
USHBP1-208ENST00000598309 M0R296 226 aa18■□□□□ 0.47
USHBP1-208ENST00000598309 PRRG1O14668 218 aa18■□□□□ 0.47
USHBP1-208ENST00000598309 ASGR2P07307 311 aa18■□□□□ 0.47
USHBP1-208ENST00000598309 CPB1P15086 417 aa18■□□□□ 0.47
USHBP1-208ENST00000598309 FSHRP23945 695 aa18■□□□□ 0.47
USHBP1-208ENST00000598309 GBP2P32456 591 aaPredicted RBP18■□□□□ 0.47
USHBP1-208ENST00000598309 NDUFA8P51970 172 aa18■□□□□ 0.47
USHBP1-208ENST00000598309 PSMD2Q13200 908 aa18■□□□□ 0.47
USHBP1-208ENST00000598309 MYBPC2Q14324 1141 aa18■□□□□ 0.47
USHBP1-208ENST00000598309 SURF1Q15526 300 aa18■□□□□ 0.47
USHBP1-208ENST00000598309 SV2CQ496J9 727 aa18■□□□□ 0.47
USHBP1-208ENST00000598309 GET4Q7L5D6 327 aaPredicted RBP18■□□□□ 0.47
USHBP1-208ENST00000598309 BMP8AQ7Z5Y6 402 aa18■□□□□ 0.47
USHBP1-208ENST00000598309 GRASPQ7Z6J2 395 aaPredicted RBP18■□□□□ 0.47
USHBP1-208ENST00000598309 C12orf56Q8IXR9 622 aa18■□□□□ 0.47
USHBP1-208ENST00000598309 FSIP1Q8NA03 581 aa18■□□□□ 0.47
USHBP1-208ENST00000598309 MYADMQ96S97 322 aa18■□□□□ 0.47
USHBP1-208ENST00000598309 CYP4F11Q9HBI6 524 aa18■□□□□ 0.47
USHBP1-208ENST00000598309 SLC39A2Q9NP94 309 aa18■□□□□ 0.47
USHBP1-208ENST00000598309 EXOC1Q9NV70 894 aa18■□□□□ 0.47
USHBP1-208ENST00000598309 ITGA11Q9UKX5 1188 aa18■□□□□ 0.47
USHBP1-208ENST00000598309 INSL5Q9Y5Q6 135 aa18■□□□□ 0.47
USHBP1-208ENST00000598309 LRG1P02750 347 aa17.99■□□□□ 0.47
USHBP1-208ENST00000598309 KNOP1Q1ED39 458 aaKnown RBP17.99■□□□□ 0.47
USHBP1-208ENST00000598309 CBWD2Q8IUF1 395 aa17.99■□□□□ 0.47
USHBP1-208ENST00000598309 NELFCDQ8IXH7 590 aa17.99■□□□□ 0.47
USHBP1-208ENST00000598309 LRRC52Q8N7C0 313 aa17.99■□□□□ 0.47
USHBP1-208ENST00000598309 C1orf127Q8N9H9 656 aa17.99■□□□□ 0.47
USHBP1-208ENST00000598309 GOLGA5Q8TBA6 731 aa17.99■□□□□ 0.47
USHBP1-208ENST00000598309 NOC3LQ8WTT2 800 aaKnown RBP17.99■□□□□ 0.47
USHBP1-208ENST00000598309 NXPE3Q969Y0 559 aa17.99■□□□□ 0.47
USHBP1-208ENST00000598309 PDE11AQ9HCR9 933 aa17.99■□□□□ 0.47
USHBP1-208ENST00000598309 AVENQ9NQS1 362 aaPredicted RBP17.99■□□□□ 0.47
USHBP1-208ENST00000598309 POLIQ9UNA4 740 aa17.99■□□□□ 0.47
USHBP1-208ENST00000598309 KPNA7A9QM74 516 aa17.98■□□□□ 0.47
USHBP1-208ENST00000598309 SEC24AO95486 1093 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms