RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 C1RP00736 705 aa21.91■■□□□ 1.1
PNKP-211ENST00000598020 TKTP29401 623 aaKnown RBP21.91■■□□□ 1.1
PNKP-211ENST00000598020 GTF2H1P32780 548 aa21.91■■□□□ 1.1
PNKP-211ENST00000598020 HYAL1Q12794 435 aa21.91■■□□□ 1.1
PNKP-211ENST00000598020 MRPL58Q14197 206 aaKnown RBP21.91■■□□□ 1.1
PNKP-211ENST00000598020 SV2CQ496J9 727 aa21.91■■□□□ 1.1
PNKP-211ENST00000598020 C15orf39Q6ZRI6 1047 aa21.91■■□□□ 1.1
PNKP-211ENST00000598020 MICALL1Q8N3F8 863 aa21.91■■□□□ 1.1
PNKP-211ENST00000598020 APPL2Q8NEU8 664 aa21.91■■□□□ 1.1
PNKP-211ENST00000598020 LNX1Q8TBB1 728 aaPredicted RBP21.91■■□□□ 1.1
PNKP-211ENST00000598020 RIN2Q8WYP3 895 aaPredicted RBP21.91■■□□□ 1.1
PNKP-211ENST00000598020 B3GALT6Q96L58 329 aa21.91■■□□□ 1.1
PNKP-211ENST00000598020 KLHL5Q96PQ7 755 aa21.91■■□□□ 1.1
PNKP-211ENST00000598020 EMILIN2Q9BXX0 1053 aa21.91■■□□□ 1.1
PNKP-211ENST00000598020 BRWD1Q9NSI6 2320 aa21.91■■□□□ 1.1
PNKP-211ENST00000598020 KPNA7A9QM74 516 aa21.9■■□□□ 1.1
PNKP-211ENST00000598020 STAU1O95793 577 aaKnown RBP21.9■■□□□ 1.1
PNKP-211ENST00000598020 GNA14O95837 355 aa21.9■■□□□ 1.1
PNKP-211ENST00000598020 KRT19P08727 400 aa21.9■■□□□ 1.1
PNKP-211ENST00000598020 CNPP09543 421 aaKnown RBP21.9■■□□□ 1.1
PNKP-211ENST00000598020 TYMPP19971 482 aa21.9■■□□□ 1.1
PNKP-211ENST00000598020 MARSP56192 900 aaKnown RBP21.9■■□□□ 1.1
PNKP-211ENST00000598020 ZACNQ401N2 412 aa21.9■■□□□ 1.1
PNKP-211ENST00000598020 SCARA3Q6AZY7 606 aa21.9■■□□□ 1.1
PNKP-211ENST00000598020 DSTYKQ6XUX3 929 aa21.9■■□□□ 1.1
PNKP-211ENST00000598020 ANKS3Q6ZW76 656 aa21.9■■□□□ 1.1
PNKP-211ENST00000598020 CEP57Q86XR8 500 aa21.9■■□□□ 1.1
PNKP-211ENST00000598020 EFHBQ8N7U6 833 aa21.9■■□□□ 1.1
PNKP-211ENST00000598020 SENP8Q96LD8 212 aa21.9■■□□□ 1.1
PNKP-211ENST00000598020 SRRTQ9BXP5 876 aaKnown RBP21.9■■□□□ 1.1
PNKP-211ENST00000598020 ANO10Q9NW15 660 aa21.9■■□□□ 1.1
PNKP-211ENST00000598020 GDAP2Q9NXN4 497 aa21.9■■□□□ 1.1
PNKP-211ENST00000598020 ARMCX3Q9UH62 379 aaPredicted RBP21.9■■□□□ 1.1
PNKP-211ENST00000598020 R3HCC1Q9Y3T6 440 aaKnown RBP21.9■■□□□ 1.1
PNKP-211ENST00000598020 BACE2Q9Y5Z0 518 aa21.9■■□□□ 1.1
PNKP-211ENST00000598020 C2CD2LO14523 706 aa21.89■■□□□ 1.09
PNKP-211ENST00000598020 STX10O60499 249 aa21.89■■□□□ 1.09
PNKP-211ENST00000598020 CLASP2O75122 1294 aaKnown RBP21.89■■□□□ 1.09
PNKP-211ENST00000598020 OAZ2O95190 189 aa21.89■■□□□ 1.09
PNKP-211ENST00000598020 LETM1O95202 739 aaPredicted RBP21.89■■□□□ 1.09
PNKP-211ENST00000598020 CST3P01034 146 aaPredicted RBP21.89■■□□□ 1.09
PNKP-211ENST00000598020 CYP11A1P05108 521 aa21.89■■□□□ 1.09
PNKP-211ENST00000598020 NRIP1P48552 1158 aa21.89■■□□□ 1.09
PNKP-211ENST00000598020 MYO1EQ12965 1108 aa21.89■■□□□ 1.09
PNKP-211ENST00000598020 KCNC3Q14003 757 aa21.89■■□□□ 1.09
PNKP-211ENST00000598020 CCDC85BQ15834 202 aaPredicted RBP21.89■■□□□ 1.09
PNKP-211ENST00000598020 CTC1Q2NKJ3 1217 aa21.89■■□□□ 1.09
PNKP-211ENST00000598020 TDRD10Q5VZ19 366 aaKnown RBP21.89■■□□□ 1.09
PNKP-211ENST00000598020 SV2AQ7L0J3 742 aa21.89■■□□□ 1.09
PNKP-211ENST00000598020 PPFIBP1Q86W92 1011 aa21.89■■□□□ 1.09
PNKP-211ENST00000598020 MTRRQ9UBK8 725 aa21.89■■□□□ 1.09
PNKP-211ENST00000598020 TEX28O15482 410 aa21.88■■□□□ 1.09
PNKP-211ENST00000598020 TBC1D4O60343 1298 aa21.88■■□□□ 1.09
PNKP-211ENST00000598020 ODC1P11926 461 aa21.88■■□□□ 1.09
PNKP-211ENST00000598020 ATICP31939 592 aa21.88■■□□□ 1.09
PNKP-211ENST00000598020 PPP3CAQ08209 521 aa21.88■■□□□ 1.09
PNKP-211ENST00000598020 ADAM15Q13444 863 aa21.88■■□□□ 1.09
PNKP-211ENST00000598020 PSMD5Q16401 504 aa21.88■■□□□ 1.09
PNKP-211ENST00000598020 STX1AQ16623 288 aa21.88■■□□□ 1.09
PNKP-211ENST00000598020 VARS2Q5ST30 1063 aaKnown RBP21.88■■□□□ 1.09
PNKP-211ENST00000598020 PRSS55Q6UWB4 352 aaPredicted RBP21.88■■□□□ 1.09
PNKP-211ENST00000598020 TMEM184AQ6ZMB5 413 aa21.88■■□□□ 1.09
PNKP-211ENST00000598020 RBM23Q86U06 439 aaKnown RBP21.88■■□□□ 1.09
PNKP-211ENST00000598020 PABPC5Q96DU9 382 aaKnown RBP21.88■■□□□ 1.09
PNKP-211ENST00000598020 HPDLQ96IR7 371 aa21.88■■□□□ 1.09
PNKP-211ENST00000598020 VRTNQ9H8Y1 702 aa21.88■■□□□ 1.09
PNKP-211ENST00000598020 DSEQ9UL01 958 aa21.88■■□□□ 1.09
PNKP-211ENST00000598020 H7C4K7 107 aa21.87■■□□□ 1.09
PNKP-211ENST00000598020 CYB561D2O14569 222 aa21.87■■□□□ 1.09
PNKP-211ENST00000598020 PER2O15055 1255 aa21.87■■□□□ 1.09
PNKP-211ENST00000598020 ADH1AP07327 375 aa21.87■■□□□ 1.09
PNKP-211ENST00000598020 TRIM49P0CI25 452 aa21.87■■□□□ 1.09
PNKP-211ENST00000598020 TRIM49CP0CI26 452 aa21.87■■□□□ 1.09
PNKP-211ENST00000598020 CA8P35219 290 aa21.87■■□□□ 1.09
PNKP-211ENST00000598020 GTF2F1P35269 517 aaKnown RBP eCLIP21.87■■□□□ 1.09
PNKP-211ENST00000598020 NDUFV1P49821 464 aa21.87■■□□□ 1.09
PNKP-211ENST00000598020 BIRC3Q13489 604 aa21.87■■□□□ 1.09
PNKP-211ENST00000598020 TRPC3Q13507 836 aa21.87■■□□□ 1.09
PNKP-211ENST00000598020 LIMS2Q7Z4I7 341 aa21.87■■□□□ 1.09
PNKP-211ENST00000598020 SPATA18Q8TC71 538 aa21.87■■□□□ 1.09
PNKP-211ENST00000598020 SLC35C1Q96A29 364 aa21.87■■□□□ 1.09
PNKP-211ENST00000598020 CLSTN3Q9BQT9 956 aa21.87■■□□□ 1.09
PNKP-211ENST00000598020 OXCT2Q9BYC2 517 aaPredicted RBP21.87■■□□□ 1.09
PNKP-211ENST00000598020 XYLT2Q9H1B5 865 aa21.87■■□□□ 1.09
PNKP-211ENST00000598020 TMEM8AQ9HCN3 771 aa21.87■■□□□ 1.09
PNKP-211ENST00000598020 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.86■■□□□ 1.09
PNKP-211ENST00000598020 PHACTR2O75167 634 aa21.86■■□□□ 1.09
PNKP-211ENST00000598020 VNN1O95497 513 aa21.86■■□□□ 1.09
PNKP-211ENST00000598020 GCLMP48507 274 aa21.86■■□□□ 1.09
PNKP-211ENST00000598020 YWHAHQ04917 246 aaPredicted RBP21.86■■□□□ 1.09
PNKP-211ENST00000598020 NCOA4Q13772 614 aa21.86■■□□□ 1.09
PNKP-211ENST00000598020 NFKBIBQ15653 356 aa21.86■■□□□ 1.09
PNKP-211ENST00000598020 CCDC40Q4G0X9 1142 aa21.86■■□□□ 1.09
PNKP-211ENST00000598020 KRT39Q6A163 491 aa21.86■■□□□ 1.09
PNKP-211ENST00000598020 SLC8B1Q6J4K2 584 aa21.86■■□□□ 1.09
PNKP-211ENST00000598020 DPH6Q7L8W6 267 aa21.86■■□□□ 1.09
PNKP-211ENST00000598020 ENOX1Q8TC92 643 aaKnown RBP21.86■■□□□ 1.09
PNKP-211ENST00000598020 SLC22A17Q8WUG5 538 aa21.86■■□□□ 1.09
PNKP-211ENST00000598020 PPM1EQ8WY54 764 aa21.86■■□□□ 1.09
PNKP-211ENST00000598020 IGFLR1Q9H665 355 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms