RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	BLOC1S4	Q9NUP1	217 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	KCNG1	Q9UIX4	513 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	ODF2L	Q9ULJ1	636 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	TBX20	Q9UMR3	447 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	UBQLN1	Q9UMX0	589 aa	Known RBP	11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	YIPF1	Q9Y548	306 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776		H0YCG3	227 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	OGT	O15294	1046 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	FAM13A	O94988	1023 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	OAZ2	O95190	189 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	PLCG1	P19174	1290 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	UBA7	P41226	1012 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	VIPR2	P41587	438 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	AARS	P49588	968 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	CDR1	P51861	262 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	EPHA5	P54756	1037 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	MCM6	Q14566	821 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	KARS	Q15046	597 aa	Known RBP	11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	TEAD2	Q15562	447 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	SLC39A4	Q6P5W5	647 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	TSSK4	Q6SA08	328 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	VIT	Q6UXI7	678 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	DSTYK	Q6XUX3	929 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	ZNF852	Q6ZMS4	543 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	DCLK2	Q8N568	766 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	MYCT1	Q8N699	235 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	TTC9B	Q8N6N2	239 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	SUMF1	Q8NBK3	374 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	BEST2	Q8NFU1	509 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	SHKBP1	Q8TBC3	707 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	DNASE1L2	Q92874	299 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	SMARCD2	Q92925	531 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	CLDN23	Q96B33	292 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	FAM212A	Q96EL1	285 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	CALML4	Q96GE6	196 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	AK8	Q96MA6	479 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	TRMT61B	Q9BVS5	477 aa	Known RBP	11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	ZHX3	Q9H4I2	956 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	RPF1	Q9H9Y2	349 aa	Known RBP	11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	ASAH2	Q9NR71	780 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	FBXO4	Q9UKT5	387 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	NDRG2	Q9UN36	371 aa	Known RBP	11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	SMC3	Q9UQE7	1217 aa		11.45	□□□□□ -0.58
LSM4-205	ENST00000597776	DNAH14	Q0VDD8	3507 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	COL4A2	P08572	1712 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	FANCM	Q8IYD8	2048 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776		A0A0B4J269	797 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	TISP43	B9A030	160 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	SPTLC1	O15269	473 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	KIN	O60870	393 aa	Known RBP	11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	SOAT2	O75908	522 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	MICAL2	O94851	1124 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	PIGR	P01833	764 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	KRT18	P05783	430 aa	Known RBP	11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	NFIC	P08651	508 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	CYP3A5	P20815	502 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	GDI1	P31150	447 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	ZNF131	P52739	623 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	DUSP4	Q13115	394 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	FZD5	Q13467	585 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	JADE1	Q6IE81	842 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	USP37	Q86T82	979 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	TMC8	Q8IU68	726 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	GPIHBP1	Q8IV16	184 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	ZNF687	Q8N1G0	1237 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	RASSF8	Q8NHQ8	419 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	RUBCN	Q92622	972 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	RAD54L	Q92698	747 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	KCNN1	Q92952	543 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	RMDN1	Q96DB5	314 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	RSPRY1	Q96DX4	576 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	TMEM209	Q96SK2	561 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	MSTO1	Q9BUK6	570 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	DNAJC25	Q9H1X3	360 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	IKZF4	Q9H2S9	585 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	SLITRK6	Q9H5Y7	841 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	PARVG	Q9HBI0	331 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	MAFF	Q9ULX9	164 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	SLC27A5	Q9Y2P5	690 aa		11.44	□□□□□ -0.58
LSM4-205	ENST00000597776	GPR179	Q6PRD1	2367 aa		11.43	□□□□□ -0.58
LSM4-205	ENST00000597776	OTOGL	Q3ZCN5	2332 aa		11.43	□□□□□ -0.58
LSM4-205	ENST00000597776		A0A1W2PRU2	124 aa		11.43	□□□□□ -0.58
LSM4-205	ENST00000597776	OR6C75	A6NL08	312 aa		11.43	□□□□□ -0.58
LSM4-205	ENST00000597776	ANKRD63	C9JTQ0	380 aa		11.43	□□□□□ -0.58
LSM4-205	ENST00000597776	SLC26A4	O43511	780 aa		11.43	□□□□□ -0.58
LSM4-205	ENST00000597776	TRAK2	O60296	914 aa		11.43	□□□□□ -0.58
LSM4-205	ENST00000597776	ADRB2	P07550	413 aa		11.43	□□□□□ -0.58
LSM4-205	ENST00000597776	PSMC3	P17980	439 aa		11.43	□□□□□ -0.58
LSM4-205	ENST00000597776	NMT1	P30419	496 aa	Known RBP	11.43	□□□□□ -0.58
LSM4-205	ENST00000597776	MAGEA9	P43362	315 aa		11.43	□□□□□ -0.58
LSM4-205	ENST00000597776	RPS9	P46781	194 aa	Known RBP	11.43	□□□□□ -0.58
LSM4-205	ENST00000597776	ACOT2	P49753	483 aa		11.43	□□□□□ -0.58
LSM4-205	ENST00000597776	LILRA4	P59901	499 aa		11.43	□□□□□ -0.58
LSM4-205	ENST00000597776	FOXK2	Q01167	660 aa		11.43	□□□□□ -0.58
LSM4-205	ENST00000597776	MTAP	Q13126	283 aa		11.43	□□□□□ -0.58
LSM4-205	ENST00000597776	KYAT1	Q16773	422 aa		11.43	□□□□□ -0.58
LSM4-205	ENST00000597776	ZNF528	Q3MIS6	628 aa		11.43	□□□□□ -0.58
LSM4-205	ENST00000597776	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	11.43	□□□□□ -0.58
LSM4-205	ENST00000597776	STXBP5	Q5T5C0	1151 aa		11.43	□□□□□ -0.58

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