RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 DRAP1Q14919 205 aaPredicted RBP16.37■□□□□ 0.21
PNKP-204ENST00000594661 EPC2Q52LR7 807 aa16.37■□□□□ 0.21
PNKP-204ENST00000594661 PHLDB3Q6NSJ2 640 aa16.37■□□□□ 0.21
PNKP-204ENST00000594661 TAPT1Q6NXT6 567 aa16.37■□□□□ 0.21
PNKP-204ENST00000594661 DNAAF5Q86Y56 855 aa16.37■□□□□ 0.21
PNKP-204ENST00000594661 DEPTORQ8TB45 409 aa16.37■□□□□ 0.21
PNKP-204ENST00000594661 IFT81Q8WYA0 676 aa16.37■□□□□ 0.21
PNKP-204ENST00000594661 CCDC127Q96BQ5 260 aa16.37■□□□□ 0.21
PNKP-204ENST00000594661 FAM129AQ9BZQ8 928 aa16.37■□□□□ 0.21
PNKP-204ENST00000594661 TMEM117Q9H0C3 514 aa16.37■□□□□ 0.21
PNKP-204ENST00000594661 CNOT10Q9H9A5 744 aaKnown RBP16.37■□□□□ 0.21
PNKP-204ENST00000594661 EHD2Q9NZN4 543 aa16.37■□□□□ 0.21
PNKP-204ENST00000594661 DIS3Q9Y2L1 958 aaKnown RBP16.37■□□□□ 0.21
PNKP-204ENST00000594661 GRID2IPA4D2P6 1211 aa16.37■□□□□ 0.21
PNKP-204ENST00000594661 BTNL10A8MVZ5 291 aa16.37■□□□□ 0.21
PNKP-204ENST00000594661 MAP3K13O43283 966 aa16.37■□□□□ 0.21
PNKP-204ENST00000594661 EDN1P05305 212 aa16.37■□□□□ 0.21
PNKP-204ENST00000594661 GARTP22102 1010 aa16.37■□□□□ 0.21
PNKP-204ENST00000594661 MXI1P50539 228 aa16.37■□□□□ 0.21
PNKP-204ENST00000594661 NCALDP61601 193 aa16.37■□□□□ 0.21
PNKP-204ENST00000594661 PLPPR4Q7Z2D5 763 aa16.37■□□□□ 0.21
PNKP-204ENST00000594661 GPR142Q7Z601 462 aa16.37■□□□□ 0.21
PNKP-204ENST00000594661 ATP8B4Q8TF62 1192 aa16.37■□□□□ 0.21
PNKP-204ENST00000594661 ZNF317Q96PQ6 595 aaPredicted RBP16.37■□□□□ 0.21
PNKP-204ENST00000594661 PARK7Q99497 189 aaKnown RBP16.37■□□□□ 0.21
PNKP-204ENST00000594661 POP1Q99575 1024 aaKnown RBP16.37■□□□□ 0.21
PNKP-204ENST00000594661 AGAP1Q9UPQ3 857 aa16.37■□□□□ 0.21
PNKP-204ENST00000594661 IVNS1ABPQ9Y6Y0 642 aa16.37■□□□□ 0.21
PNKP-204ENST00000594661 ZSCAN5CA6NGD5 496 aaPredicted RBP16.36■□□□□ 0.21
PNKP-204ENST00000594661 P4HA2O15460 535 aa16.36■□□□□ 0.21
PNKP-204ENST00000594661 HSD17B3P37058 310 aa16.36■□□□□ 0.21
PNKP-204ENST00000594661 CD151P48509 253 aa16.36■□□□□ 0.21
PNKP-204ENST00000594661 LIG4P49917 911 aa16.36■□□□□ 0.21
PNKP-204ENST00000594661 KCNJ2P63252 427 aa16.36■□□□□ 0.21
PNKP-204ENST00000594661 ARHGAP1Q07960 439 aa16.36■□□□□ 0.21
PNKP-204ENST00000594661 CYP24A1Q07973 514 aa16.36■□□□□ 0.21
PNKP-204ENST00000594661 STRN3Q13033 797 aa16.36■□□□□ 0.21
PNKP-204ENST00000594661 MEI1Q5TIA1 1274 aa16.36■□□□□ 0.21
PNKP-204ENST00000594661 TRPM8Q7Z2W7 1104 aa16.36■□□□□ 0.21
PNKP-204ENST00000594661 APBB1IPQ7Z5R6 666 aaPredicted RBP16.36■□□□□ 0.21
PNKP-204ENST00000594661 ABRAQ8N0Z2 381 aa16.36■□□□□ 0.21
PNKP-204ENST00000594661 GPD1LQ8N335 351 aa16.36■□□□□ 0.21
PNKP-204ENST00000594661 KCNN1Q92952 543 aa16.36■□□□□ 0.21
PNKP-204ENST00000594661 MFSD14AQ96MC6 490 aa16.36■□□□□ 0.21
PNKP-204ENST00000594661 XPO6Q96QU8 1125 aaKnown RBP16.36■□□□□ 0.21
PNKP-204ENST00000594661 TOPORSQ9NS56 1045 aaPredicted RBP16.36■□□□□ 0.21
PNKP-204ENST00000594661 PCMTD2Q9NV79 361 aa16.36■□□□□ 0.21
PNKP-204ENST00000594661 ESYT3A0FGR9 886 aa16.36■□□□□ 0.21
PNKP-204ENST00000594661 DDX3XO00571 662 aaKnown RBP eCLIP16.36■□□□□ 0.21
PNKP-204ENST00000594661 STRNO43815 780 aa16.36■□□□□ 0.21
PNKP-204ENST00000594661 ECEL1O95672 775 aa16.36■□□□□ 0.21
PNKP-204ENST00000594661 TPP2P29144 1249 aaPredicted RBP16.36■□□□□ 0.21
PNKP-204ENST00000594661 MAMDC4Q6UXC1 1216 aa16.36■□□□□ 0.21
PNKP-204ENST00000594661 ARHGEF19Q8IW93 802 aa16.36■□□□□ 0.21
PNKP-204ENST00000594661 LMNTD2Q8IXW0 634 aa16.36■□□□□ 0.21
PNKP-204ENST00000594661 U2AF1L4Q8WU68 220 aaKnown RBP16.36■□□□□ 0.21
PNKP-204ENST00000594661 TRAPPC12Q8WVT3 735 aa16.36■□□□□ 0.21
PNKP-204ENST00000594661 PRPF31Q8WWY3 499 aaKnown RBP16.36■□□□□ 0.21
PNKP-204ENST00000594661 MS4A14Q96JA4 679 aa16.36■□□□□ 0.21
PNKP-204ENST00000594661 FAM213AQ9BRX8 229 aa16.36■□□□□ 0.21
PNKP-204ENST00000594661 HAPLN2Q9GZV7 340 aa16.36■□□□□ 0.21
PNKP-204ENST00000594661 KATNBL1Q9H079 304 aa16.36■□□□□ 0.21
PNKP-204ENST00000594661 NENFQ9UMX5 172 aa16.36■□□□□ 0.21
PNKP-204ENST00000594661 PACSIN2Q9UNF0 486 aaPredicted RBP16.36■□□□□ 0.21
PNKP-204ENST00000594661 K7ERI5 159 aa16.35■□□□□ 0.21
PNKP-204ENST00000594661 H2AFZP0C0S5 128 aa16.35■□□□□ 0.21
PNKP-204ENST00000594661 TUBP50607 506 aa16.35■□□□□ 0.21
PNKP-204ENST00000594661 HUNKP57058 714 aa16.35■□□□□ 0.21
PNKP-204ENST00000594661 GRB14Q14449 540 aa16.35■□□□□ 0.21
PNKP-204ENST00000594661 UAP1Q16222 522 aaPredicted RBP16.35■□□□□ 0.21
PNKP-204ENST00000594661 ARHGAP44Q17R89 818 aa16.35■□□□□ 0.21
PNKP-204ENST00000594661 FAM110CQ1W6H9 321 aa16.35■□□□□ 0.21
PNKP-204ENST00000594661 CFAP221Q4G0U5 840 aa16.35■□□□□ 0.21
PNKP-204ENST00000594661 H2AFVQ71UI9 128 aa16.35■□□□□ 0.21
PNKP-204ENST00000594661 LRRC71Q8N4P6 559 aa16.35■□□□□ 0.21
PNKP-204ENST00000594661 VTA1Q9NP79 307 aa16.35■□□□□ 0.21
PNKP-204ENST00000594661 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.35■□□□□ 0.21
PNKP-204ENST00000594661 ADAM22Q9P0K1 906 aa16.35■□□□□ 0.21
PNKP-204ENST00000594661 PHF24Q9UPV7 400 aa16.35■□□□□ 0.21
PNKP-204ENST00000594661 ITGBL1O95965 494 aaPredicted RBP16.34■□□□□ 0.21
PNKP-204ENST00000594661 PIGRP01833 764 aa16.34■□□□□ 0.21
PNKP-204ENST00000594661 RARAP10276 462 aa16.34■□□□□ 0.21
PNKP-204ENST00000594661 CETN1Q12798 172 aa16.34■□□□□ 0.21
PNKP-204ENST00000594661 OLIG1Q8TAK6 271 aa16.34■□□□□ 0.21
PNKP-204ENST00000594661 PRCCQ92733 491 aaPredicted RBP16.34■□□□□ 0.21
PNKP-204ENST00000594661 ZBTB45Q96K62 511 aaPredicted RBP16.34■□□□□ 0.21
PNKP-204ENST00000594661 FAM84AQ96KN4 292 aa16.34■□□□□ 0.21
PNKP-204ENST00000594661 TRAPPC9Q96Q05 1148 aa16.34■□□□□ 0.21
PNKP-204ENST00000594661 ZWILCHQ9H900 591 aa16.34■□□□□ 0.21
PNKP-204ENST00000594661 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.34■□□□□ 0.212e-7■■■■■ 93.2
PNKP-204ENST00000594661 PPME1Q9Y570 386 aa16.34■□□□□ 0.21
PNKP-204ENST00000594661 STYXL1Q9Y6J8 313 aa16.34■□□□□ 0.21
PNKP-204ENST00000594661 PMM2O15305 246 aa16.34■□□□□ 0.21
PNKP-204ENST00000594661 CREB3O43889 395 aa16.34■□□□□ 0.21
PNKP-204ENST00000594661 ADCY3O60266 1144 aa16.34■□□□□ 0.21
PNKP-204ENST00000594661 SNAI1O95863 264 aaPredicted RBP16.34■□□□□ 0.21
PNKP-204ENST00000594661 ADCYAP1R1P41586 468 aa16.34■□□□□ 0.21
PNKP-204ENST00000594661 LMNB2Q03252 620 aa16.34■□□□□ 0.21
PNKP-204ENST00000594661 SFSWAPQ12872 951 aaKnown RBP16.34■□□□□ 0.21
PNKP-204ENST00000594661 ZNF467Q7Z7K2 595 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms