RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 PPM1LQ5SGD2 360 aa20.02■□□□□ 0.8
SHKBP1-202ENST00000593764 LIN9Q5TKA1 542 aa20.02■□□□□ 0.8
SHKBP1-202ENST00000593764 NT5DC4Q86YG4 428 aa20.02■□□□□ 0.8
SHKBP1-202ENST00000593764 PLCD3Q8N3E9 789 aa20.02■□□□□ 0.8
SHKBP1-202ENST00000593764 SLC7A14Q8TBB6 771 aa20.02■□□□□ 0.8
SHKBP1-202ENST00000593764 SLC39A2Q9NP94 309 aa20.02■□□□□ 0.8
SHKBP1-202ENST00000593764 USP25Q9UHP3 1055 aa20.02■□□□□ 0.8
SHKBP1-202ENST00000593764 CLUHO75153 1309 aa20.02■□□□□ 0.79
SHKBP1-202ENST00000593764 A0A1W2PQ27 194 aa20.01■□□□□ 0.79
SHKBP1-202ENST00000593764 A0A1W2PQ64 194 aa20.01■□□□□ 0.79
SHKBP1-202ENST00000593764 A0A1W2PQD8 194 aa20.01■□□□□ 0.79
SHKBP1-202ENST00000593764 SYKP43405 635 aa20.01■□□□□ 0.79
SHKBP1-202ENST00000593764 YWHAHQ04917 246 aaPredicted RBP20.01■□□□□ 0.79
SHKBP1-202ENST00000593764 PTPN21Q16825 1174 aa20.01■□□□□ 0.79
SHKBP1-202ENST00000593764 ZNF280DQ6N043 979 aa20.01■□□□□ 0.79
SHKBP1-202ENST00000593764 RTL10Q7L3V2 364 aa20.01■□□□□ 0.79
SHKBP1-202ENST00000593764 OTOP3Q7RTS5 596 aa20.01■□□□□ 0.79
SHKBP1-202ENST00000593764 GPD1LQ8N335 351 aa20.01■□□□□ 0.79
SHKBP1-202ENST00000593764 SENP8Q96LD8 212 aa20.01■□□□□ 0.79
SHKBP1-202ENST00000593764 GOLPH3LQ9H4A5 285 aa20.01■□□□□ 0.79
SHKBP1-202ENST00000593764 PIDD1Q9HB75 910 aa20.01■□□□□ 0.79
SHKBP1-202ENST00000593764 RBAKQ9NYW8 714 aaPredicted RBP20.01■□□□□ 0.79
SHKBP1-202ENST00000593764 KIAA0391O15091 583 aaKnown RBP20■□□□□ 0.79
SHKBP1-202ENST00000593764 CCL16O15467 120 aa20■□□□□ 0.79
SHKBP1-202ENST00000593764 ASGR2P07307 311 aa20■□□□□ 0.79
SHKBP1-202ENST00000593764 ATF2P15336 505 aa20■□□□□ 0.79
SHKBP1-202ENST00000593764 TYMPP19971 482 aa20■□□□□ 0.79
SHKBP1-202ENST00000593764 PAX3P23760 479 aa20■□□□□ 0.79
SHKBP1-202ENST00000593764 ARPP19P56211 112 aa20■□□□□ 0.79
SHKBP1-202ENST00000593764 NUCB2P80303 420 aa20■□□□□ 0.79
SHKBP1-202ENST00000593764 BMT2Q1RMZ1 405 aa20■□□□□ 0.79
SHKBP1-202ENST00000593764 SCARA3Q6AZY7 606 aa20■□□□□ 0.79
SHKBP1-202ENST00000593764 DSTYKQ6XUX3 929 aa20■□□□□ 0.79
SHKBP1-202ENST00000593764 GRASPQ7Z6J2 395 aaPredicted RBP20■□□□□ 0.79
SHKBP1-202ENST00000593764 NELFCDQ8IXH7 590 aa20■□□□□ 0.79
SHKBP1-202ENST00000593764 CXorf38Q8TB03 319 aa20■□□□□ 0.79
SHKBP1-202ENST00000593764 ACSF2Q96CM8 615 aaPredicted RBP20■□□□□ 0.79
SHKBP1-202ENST00000593764 BORCS6Q96GS4 357 aa20■□□□□ 0.79
SHKBP1-202ENST00000593764 FAM84AQ96KN4 292 aa20■□□□□ 0.79
SHKBP1-202ENST00000593764 PDE11AQ9HCR9 933 aa20■□□□□ 0.79
SHKBP1-202ENST00000593764 AGPAT3Q9NRZ7 376 aa20■□□□□ 0.79
SHKBP1-202ENST00000593764 HSPBP1Q9NZL4 362 aa20■□□□□ 0.79
SHKBP1-202ENST00000593764 UBE4BO95155 1302 aa20■□□□□ 0.79
SHKBP1-202ENST00000593764 DOCK8Q8NF50 2099 aa19.99■□□□□ 0.79
SHKBP1-202ENST00000593764 PRR33A8MZF0 331 aa19.99■□□□□ 0.79
SHKBP1-202ENST00000593764 SEC24AO95486 1093 aa19.99■□□□□ 0.79
SHKBP1-202ENST00000593764 POU2F2P09086 479 aa19.99■□□□□ 0.79
SHKBP1-202ENST00000593764 TFAMQ00059 246 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-202ENST00000593764 STK4Q13043 487 aa19.99■□□□□ 0.79
SHKBP1-202ENST00000593764 KMT5BQ4FZB7 885 aa19.99■□□□□ 0.79
SHKBP1-202ENST00000593764 TPGS2Q68CL5 300 aa19.99■□□□□ 0.79
SHKBP1-202ENST00000593764 CBWD2Q8IUF1 395 aa19.99■□□□□ 0.79
SHKBP1-202ENST00000593764 TCEAL8Q8IYN2 117 aa19.99■□□□□ 0.79
SHKBP1-202ENST00000593764 FSIP1Q8NA03 581 aa19.99■□□□□ 0.79
SHKBP1-202ENST00000593764 MYADMQ96S97 322 aa19.99■□□□□ 0.79
SHKBP1-202ENST00000593764 ARHGEF37A1IGU5 675 aa19.98■□□□□ 0.79
SHKBP1-202ENST00000593764 CYP11A1P05108 521 aa19.98■□□□□ 0.79
SHKBP1-202ENST00000593764 SNRPFP62306 86 aaKnown RBP19.98■□□□□ 0.79
SHKBP1-202ENST00000593764 NTHL1P78549 312 aa19.98■□□□□ 0.79
SHKBP1-202ENST00000593764 RNF19BQ6ZMZ0 732 aa19.98■□□□□ 0.79
SHKBP1-202ENST00000593764 TRIM67Q6ZTA4 783 aa19.98■□□□□ 0.79
SHKBP1-202ENST00000593764 C1orf127Q8N9H9 656 aa19.98■□□□□ 0.79
SHKBP1-202ENST00000593764 KIAA0895Q8NCT3 520 aa19.98■□□□□ 0.79
SHKBP1-202ENST00000593764 NOC3LQ8WTT2 800 aaKnown RBP19.98■□□□□ 0.79
SHKBP1-202ENST00000593764 AFF4Q9UHB7 1163 aaKnown RBP19.98■□□□□ 0.79
SHKBP1-202ENST00000593764 NOTCH4Q99466 2003 aa19.98■□□□□ 0.79
SHKBP1-202ENST00000593764 ZNF233A6NK53 670 aa19.97■□□□□ 0.79
SHKBP1-202ENST00000593764 CLIC2O15247 247 aa19.97■□□□□ 0.79
SHKBP1-202ENST00000593764 XYLBO75191 536 aa19.97■□□□□ 0.79
SHKBP1-202ENST00000593764 VNN2O95498 520 aa19.97■□□□□ 0.79
SHKBP1-202ENST00000593764 MYL1P05976 194 aa19.97■□□□□ 0.79
SHKBP1-202ENST00000593764 PRR29P0C7W0 189 aa19.97■□□□□ 0.79
SHKBP1-202ENST00000593764 ODC1P11926 461 aa19.97■□□□□ 0.79
SHKBP1-202ENST00000593764 COL9A1P20849 921 aa19.97■□□□□ 0.79
SHKBP1-202ENST00000593764 ELF1P32519 619 aa19.97■□□□□ 0.79
SHKBP1-202ENST00000593764 TAF6P49848 677 aa19.97■□□□□ 0.79
SHKBP1-202ENST00000593764 KNOP1Q1ED39 458 aaKnown RBP19.97■□□□□ 0.79
SHKBP1-202ENST00000593764 OVOS1Q6IE37 1185 aa19.97■□□□□ 0.79
SHKBP1-202ENST00000593764 USP37Q86T82 979 aa19.97■□□□□ 0.79
SHKBP1-202ENST00000593764 CACTINQ8WUQ7 758 aaKnown RBP19.97■□□□□ 0.79
SHKBP1-202ENST00000593764 OXCT2Q9BYC2 517 aaPredicted RBP19.97■□□□□ 0.79
SHKBP1-202ENST00000593764 SMOC2Q9H3U7 446 aa19.97■□□□□ 0.79
SHKBP1-202ENST00000593764 CYP4F11Q9HBI6 524 aa19.97■□□□□ 0.79
SHKBP1-202ENST00000593764 KIAA1586Q9HCI6 787 aa19.97■□□□□ 0.79
SHKBP1-202ENST00000593764 HCFC1R1Q9NWW0 138 aa19.97■□□□□ 0.79
SHKBP1-202ENST00000593764 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.97■□□□□ 0.791e-8■■■■■ 45.1
SHKBP1-202ENST00000593764 EPS15L1Q9UBC2 864 aa19.97■□□□□ 0.79
SHKBP1-202ENST00000593764 DNMT3BQ9UBC3 853 aaKnown RBP19.97■□□□□ 0.79
SHKBP1-202ENST00000593764 POLIQ9UNA4 740 aa19.97■□□□□ 0.79
SHKBP1-202ENST00000593764 SORCS3Q9UPU3 1222 aa19.97■□□□□ 0.79
SHKBP1-202ENST00000593764 OR6C75A6NL08 312 aa19.96■□□□□ 0.79
SHKBP1-202ENST00000593764 TULP1O00294 542 aaPredicted RBP19.96■□□□□ 0.79
SHKBP1-202ENST00000593764 CYB561D2O14569 222 aa19.96■□□□□ 0.79
SHKBP1-202ENST00000593764 PRRG1O14668 218 aa19.96■□□□□ 0.79
SHKBP1-202ENST00000593764 ZNF202O95125 648 aa19.96■□□□□ 0.79
SHKBP1-202ENST00000593764 ITGB3P05106 788 aa19.96■□□□□ 0.79
SHKBP1-202ENST00000593764 OR4Q2P0C623 313 aa19.96■□□□□ 0.79
SHKBP1-202ENST00000593764 GBP2P32456 591 aaPredicted RBP19.96■□□□□ 0.79
SHKBP1-202ENST00000593764 ADCY1Q08828 1119 aa19.96■□□□□ 0.79
SHKBP1-202ENST00000593764 SIGLEC14Q08ET2 396 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms