RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 MAGEA9P43362 315 aa12.24□□□□□ -0.45
PRKCSH-220ENST00000593104 CYP4A22Q5TCH4 519 aa12.24□□□□□ -0.45
PRKCSH-220ENST00000593104 IQCEQ6IPM2 695 aa12.24□□□□□ -0.45
PRKCSH-220ENST00000593104 ZNF280DQ6N043 979 aa12.24□□□□□ -0.45
PRKCSH-220ENST00000593104 C1orf186Q6ZWK4 172 aa12.24□□□□□ -0.45
PRKCSH-220ENST00000593104 TMC8Q8IU68 726 aa12.24□□□□□ -0.45
PRKCSH-220ENST00000593104 ZNF512Q96ME7 567 aaPredicted RBP12.24□□□□□ -0.45
PRKCSH-220ENST00000593104 NELL2Q99435 816 aa12.24□□□□□ -0.45
PRKCSH-220ENST00000593104 LRRC3Q9BY71 257 aa12.24□□□□□ -0.45
PRKCSH-220ENST00000593104 FOXP1Q9H334 677 aaPredicted RBP12.24□□□□□ -0.45
PRKCSH-220ENST00000593104 TMEM134Q9H6X4 195 aa12.24□□□□□ -0.45
PRKCSH-220ENST00000593104 ASAH2Q9NR71 780 aa12.24□□□□□ -0.45
PRKCSH-220ENST00000593104 AFF4Q9UHB7 1163 aaKnown RBP12.24□□□□□ -0.45
PRKCSH-220ENST00000593104 GMEB2Q9UKD1 530 aa12.24□□□□□ -0.45
PRKCSH-220ENST00000593104 RALGAPA1Q6GYQ0 2036 aa12.23□□□□□ -0.45
PRKCSH-220ENST00000593104 ZNF197O14709 1029 aa12.23□□□□□ -0.45
PRKCSH-220ENST00000593104 ZNF263O14978 683 aa12.23□□□□□ -0.45
PRKCSH-220ENST00000593104 HRO43593 1189 aa12.23□□□□□ -0.45
PRKCSH-220ENST00000593104 DUSP4Q13115 394 aa12.23□□□□□ -0.45
PRKCSH-220ENST00000593104 GNL2Q13823 731 aaKnown RBP12.23□□□□□ -0.45
PRKCSH-220ENST00000593104 NOLC1Q14978 699 aaKnown RBP eCLIP12.23□□□□□ -0.45
PRKCSH-220ENST00000593104 CCDC6Q16204 474 aa12.23□□□□□ -0.45
PRKCSH-220ENST00000593104 IGSF22Q8N9C0 903 aa12.23□□□□□ -0.45
PRKCSH-220ENST00000593104 FBXO18Q8NFZ0 1043 aa12.23□□□□□ -0.45
PRKCSH-220ENST00000593104 IRF7Q92985 503 aa12.23□□□□□ -0.45
PRKCSH-220ENST00000593104 KIF12Q96FN5 646 aa12.23□□□□□ -0.45
PRKCSH-220ENST00000593104 PNMA5Q96PV4 448 aa12.23□□□□□ -0.45
PRKCSH-220ENST00000593104 MKNK1Q9BUB5 465 aa12.23□□□□□ -0.45
PRKCSH-220ENST00000593104 SMG9Q9H0W8 520 aaKnown RBP12.23□□□□□ -0.45
PRKCSH-220ENST00000593104 POLR3BQ9NW08 1133 aaPredicted RBP12.23□□□□□ -0.45
PRKCSH-220ENST00000593104 GTSE1Q9NYZ3 720 aa12.23□□□□□ -0.45
PRKCSH-220ENST00000593104 PCDHB8Q9UN66 801 aa12.23□□□□□ -0.45
PRKCSH-220ENST00000593104 NCOR2Q9Y618 2525 aa12.23□□□□□ -0.45
PRKCSH-220ENST00000593104 SPTBN2O15020 2390 aa12.23□□□□□ -0.45
PRKCSH-220ENST00000593104 ATG2BQ96BY7 2078 aa12.23□□□□□ -0.45
PRKCSH-220ENST00000593104 FRYLO94915 3013 aa12.23□□□□□ -0.45
PRKCSH-220ENST00000593104 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.22□□□□□ -0.45
PRKCSH-220ENST00000593104 MAN2B1O00754 1011 aa12.22□□□□□ -0.45
PRKCSH-220ENST00000593104 MUTP22033 750 aa12.22□□□□□ -0.45
PRKCSH-220ENST00000593104 RPL9P32969 192 aaKnown RBP12.22□□□□□ -0.45
PRKCSH-220ENST00000593104 MATR3P43243 847 aaKnown RBP eCLIP12.22□□□□□ -0.45
PRKCSH-220ENST00000593104 EPHA5P54756 1037 aa12.22□□□□□ -0.45
PRKCSH-220ENST00000593104 CYP4F8P98187 520 aa12.22□□□□□ -0.45
PRKCSH-220ENST00000593104 LMNB2Q03252 620 aa12.22□□□□□ -0.45
PRKCSH-220ENST00000593104 TNK2Q07912 1038 aa12.22□□□□□ -0.45
PRKCSH-220ENST00000593104 TPGS2Q68CL5 300 aa12.22□□□□□ -0.45
PRKCSH-220ENST00000593104 PKN3Q6P5Z2 889 aa12.22□□□□□ -0.45
PRKCSH-220ENST00000593104 RTL10Q7L3V2 364 aa12.22□□□□□ -0.45
PRKCSH-220ENST00000593104 APBB1IPQ7Z5R6 666 aaPredicted RBP12.22□□□□□ -0.45
PRKCSH-220ENST00000593104 ELMOD1Q8N336 334 aa12.22□□□□□ -0.45
PRKCSH-220ENST00000593104 ATAD1Q8NBU5 361 aa12.22□□□□□ -0.45
PRKCSH-220ENST00000593104 TMEM161BQ8NDZ6 487 aa12.22□□□□□ -0.45
PRKCSH-220ENST00000593104 STKLD1Q8NE28 680 aa12.22□□□□□ -0.45
PRKCSH-220ENST00000593104 LRRC15Q8TF66 581 aa12.22□□□□□ -0.45
PRKCSH-220ENST00000593104 SECISBP2LQ93073 1101 aaKnown RBP12.22□□□□□ -0.45
PRKCSH-220ENST00000593104 LPIN3Q9BQK8 851 aa12.22□□□□□ -0.45
PRKCSH-220ENST00000593104 DNM3Q9UQ16 869 aa12.22□□□□□ -0.45
PRKCSH-220ENST00000593104 TSC2P49815 1807 aa12.22□□□□□ -0.45
PRKCSH-220ENST00000593104 K7ESF4 209 aa12.21□□□□□ -0.45
PRKCSH-220ENST00000593104 PRAMEF12O95522 483 aa12.21□□□□□ -0.45
PRKCSH-220ENST00000593104 MAPTP10636 758 aaKnown RBP12.21□□□□□ -0.45
PRKCSH-220ENST00000593104 MARCKSP29966 332 aaPredicted RBP12.21□□□□□ -0.45
PRKCSH-220ENST00000593104 CXCL12P48061 93 aa12.21□□□□□ -0.45
PRKCSH-220ENST00000593104 PXNP49023 591 aaPredicted RBP12.21□□□□□ -0.45
PRKCSH-220ENST00000593104 YWHAHQ04917 246 aaPredicted RBP12.21□□□□□ -0.45
PRKCSH-220ENST00000593104 SIM2Q14190 667 aaPredicted RBP12.21□□□□□ -0.45
PRKCSH-220ENST00000593104 PON2Q15165 354 aa12.21□□□□□ -0.45
PRKCSH-220ENST00000593104 KRT79Q5XKE5 535 aa12.21□□□□□ -0.45
PRKCSH-220ENST00000593104 GAREM2Q75VX8 874 aa12.21□□□□□ -0.45
PRKCSH-220ENST00000593104 ARID3BQ8IVW6 561 aaPredicted RBP12.21□□□□□ -0.45
PRKCSH-220ENST00000593104 MFSD6LQ8IWD5 586 aa12.21□□□□□ -0.45
PRKCSH-220ENST00000593104 APPL2Q8NEU8 664 aa12.21□□□□□ -0.45
PRKCSH-220ENST00000593104 DEPDC1BQ8WUY9 529 aa12.21□□□□□ -0.45
PRKCSH-220ENST00000593104 FAM212AQ96EL1 285 aa12.21□□□□□ -0.45
PRKCSH-220ENST00000593104 DRC1Q96MC2 740 aa12.21□□□□□ -0.45
PRKCSH-220ENST00000593104 SEMA4GQ9NTN9 838 aa12.21□□□□□ -0.45
PRKCSH-220ENST00000593104 NOL7Q9UMY1 257 aaKnown RBP12.21□□□□□ -0.45
PRKCSH-220ENST00000593104 LIMCH1Q9UPQ0 1083 aa12.21□□□□□ -0.45
PRKCSH-220ENST00000593104 SCN1AP35498 2009 aa12.2□□□□□ -0.46
PRKCSH-220ENST00000593104 MTMR11A4FU01 709 aa12.2□□□□□ -0.46
PRKCSH-220ENST00000593104 LACTBL1A8MY62 500 aa12.2□□□□□ -0.46
PRKCSH-220ENST00000593104 SPECC1L-ADORA2AF8WAN1 911 aa12.2□□□□□ -0.46
PRKCSH-220ENST00000593104 M0QZQ0 153 aa12.2□□□□□ -0.46
PRKCSH-220ENST00000593104 TOM1L1O75674 476 aa12.2□□□□□ -0.46
PRKCSH-220ENST00000593104 MICAL2O94851 1124 aa12.2□□□□□ -0.46
PRKCSH-220ENST00000593104 CCR3P51677 355 aa12.2□□□□□ -0.46
PRKCSH-220ENST00000593104 KPNA1P52294 538 aaPredicted RBP12.2□□□□□ -0.46
PRKCSH-220ENST00000593104 STRN3Q13033 797 aa12.2□□□□□ -0.46
PRKCSH-220ENST00000593104 ORC2Q13416 577 aaPredicted RBP12.2□□□□□ -0.46
PRKCSH-220ENST00000593104 PPM1JQ5JR12 505 aa12.2□□□□□ -0.46
PRKCSH-220ENST00000593104 DSTYKQ6XUX3 929 aa12.2□□□□□ -0.46
PRKCSH-220ENST00000593104 YAF2Q8IY57 180 aa12.2□□□□□ -0.46
PRKCSH-220ENST00000593104 FAM184AQ8NB25 1140 aa12.2□□□□□ -0.46
PRKCSH-220ENST00000593104 BEST2Q8NFU1 509 aa12.2□□□□□ -0.46
PRKCSH-220ENST00000593104 OR10T2Q8NGX3 314 aa12.2□□□□□ -0.46
PRKCSH-220ENST00000593104 CSGALNACT1Q8TDX6 532 aa12.2□□□□□ -0.46
PRKCSH-220ENST00000593104 RTKNQ9BST9 563 aa12.2□□□□□ -0.46
PRKCSH-220ENST00000593104 ATXN3LQ9H3M9 355 aa12.2□□□□□ -0.46
PRKCSH-220ENST00000593104 RXFP3Q9NSD7 469 aa12.2□□□□□ -0.46
PRKCSH-220ENST00000593104 RAB23Q9ULC3 237 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 337.6 ms