RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 LEXMQ3ZCV2 418 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 LLGL2Q6P1M3 1020 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 GJB7Q6PEY0 223 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 CD300LGQ6UXG3 332 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 C15orf39Q6ZRI6 1047 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 INTS8Q75QN2 995 aaKnown RBP10.41□□□□□ -0.74
DDX39A-220ENST00000593008 SV2AQ7L0J3 742 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 TRAPPC11Q7Z392 1133 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 APBB1IPQ7Z5R6 666 aaPredicted RBP10.41□□□□□ -0.74
DDX39A-220ENST00000593008 WDR49Q8IV35 697 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 VPS52Q8N1B4 723 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.41□□□□□ -0.74
DDX39A-220ENST00000593008 PPP2R3CQ969Q6 453 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 IGSF21Q96ID5 467 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 UHRF1Q96T88 793 aaPredicted RBP10.41□□□□□ -0.74
DDX39A-220ENST00000593008 TUBGCP2Q9BSJ2 902 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 VN1R3Q9BXE9 311 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 MARCH5Q9NX47 278 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 KANSL3Q9P2N6 904 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 MAGEC2Q9UBF1 373 aaPredicted RBP10.41□□□□□ -0.74
DDX39A-220ENST00000593008 LIMA1Q9UHB6 759 aaKnown RBP10.41□□□□□ -0.74
DDX39A-220ENST00000593008 BARX2Q9UMQ3 279 aaPredicted RBP10.41□□□□□ -0.74
DDX39A-220ENST00000593008 LZTS1Q9Y250 596 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 FAN1Q9Y2M0 1017 aa10.41□□□□□ -0.74
DDX39A-220ENST00000593008 PLXNA4Q9HCM2 1894 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 SMTNL1A8MU46 457 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 GOLGA6L19H0YKK7 550 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 PES1O00541 588 aaKnown RBP10.4□□□□□ -0.74
DDX39A-220ENST00000593008 NRP1O14786 923 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 EPHB6O15197 1021 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 MAPK13O15264 365 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 HCRTO43612 131 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 NCK2O43639 380 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 CXCL14O95715 111 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 CST3P01034 146 aaPredicted RBP10.4□□□□□ -0.74
DDX39A-220ENST00000593008 HLA-DRAP01903 254 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 AFPP02771 609 aaKnown RBP10.4□□□□□ -0.74
DDX39A-220ENST00000593008 ALDH2P05091 517 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 TMEM191BP0C7N4 346 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 EEF1GP26641 437 aaKnown RBP10.4□□□□□ -0.74
DDX39A-220ENST00000593008 FMO5P49326 533 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 NDUFV1P49821 464 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 MXI1P50539 228 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 MYL6P60660 151 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 CLDN10P78369 228 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 MYL7Q01449 175 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 DSC1Q08554 894 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 KCNH2Q12809 1159 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 LRMPQ12912 555 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 GRIK3Q13003 919 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 ADAM15Q13444 863 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 BIRC3Q13489 604 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 COL19A1Q14993 1142 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 MAN2A1Q16706 1144 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 DUSP6Q16828 381 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 CTC1Q2NKJ3 1217 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 VWA3BQ502W6 1294 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 C9orf57Q5W0N0 161 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 PTCRAQ6ISU1 281 aaPredicted RBP10.4□□□□□ -0.74
DDX39A-220ENST00000593008 COLGALT2Q8IYK4 626 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 VN1R2Q8NFZ6 395 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 TMC2Q8TDI7 906 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 RSPH1Q8WYR4 309 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 KAT5Q92993 513 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 B3GALT6Q96L58 329 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 FNBP1Q96RU3 617 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 APOBEC3GQ9HC16 384 aaKnown RBP10.4□□□□□ -0.74
DDX39A-220ENST00000593008 KIAA1586Q9HCI6 787 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 DPP3Q9NY33 737 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 IFNKQ9P0W0 207 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 POLIQ9UNA4 740 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.4□□□□□ -0.74
DDX39A-220ENST00000593008 MUC3AQ02505 3323 aa10.4□□□□□ -0.74
DDX39A-220ENST00000593008 TDRD15B5MCY1 1934 aaKnown RBP10.4□□□□□ -0.74
DDX39A-220ENST00000593008 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.39□□□□□ -0.75
DDX39A-220ENST00000593008 FSD2A1L4K1 749 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 C2orf71A6NGG8 1288 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 LGALS16A8MUM7 142 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 PODXLO00592 558 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 GNA14O95837 355 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 GLP2RO95838 553 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 THP07101 528 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 KRT19P08727 400 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 IL9P15248 144 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 SLC9A1P19634 815 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 CDK11BP21127 795 aaKnown RBP10.39□□□□□ -0.75
DDX39A-220ENST00000593008 PIK3CAP42336 1068 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 BRCC3P46736 316 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 RAP1GAPP47736 663 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 CDR1P51861 262 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 MCCD1P59942 119 aaPredicted RBP10.39□□□□□ -0.75
DDX39A-220ENST00000593008 PLCB2Q00722 1185 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 KCNMA1Q12791 1236 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 HSP90AA2PQ14568 343 aaPredicted RBP10.39□□□□□ -0.75
DDX39A-220ENST00000593008 SMC1AQ14683 1233 aaKnown RBP10.39□□□□□ -0.75
DDX39A-220ENST00000593008 KYAT1Q16773 422 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 ZACNQ401N2 412 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 PDE12Q6L8Q7 609 aaKnown RBP10.39□□□□□ -0.75
DDX39A-220ENST00000593008 DPY19L2P1Q6NXN4 242 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 SCARA5Q6ZMJ2 495 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms