RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 CENPPQ6IPU0 288 aa16.55■□□□□ 0.24
TRIM47-206ENST00000592942 PTCRAQ6ISU1 281 aaPredicted RBP16.55■□□□□ 0.24
TRIM47-206ENST00000592942 SPATA31D4Q6ZUB0 917 aa16.55■□□□□ 0.24
TRIM47-206ENST00000592942 GLYCTKQ8IVS8 523 aa16.55■□□□□ 0.24
TRIM47-206ENST00000592942 ADSSL1Q8N142 457 aa16.55■□□□□ 0.24
TRIM47-206ENST00000592942 C12orf76Q8N812 135 aaPredicted RBP16.55■□□□□ 0.24
TRIM47-206ENST00000592942 CACTINQ8WUQ7 758 aaKnown RBP16.55■□□□□ 0.24
TRIM47-206ENST00000592942 SUSD6Q92537 303 aa16.55■□□□□ 0.24
TRIM47-206ENST00000592942 SENP8Q96LD8 212 aa16.55■□□□□ 0.24
TRIM47-206ENST00000592942 TIMM13Q9Y5L4 95 aaPredicted RBP16.55■□□□□ 0.24
TRIM47-206ENST00000592942 PLXNA3P51805 1871 aa16.54■□□□□ 0.24
TRIM47-206ENST00000592942 OAZ2O95190 189 aa16.54■□□□□ 0.24
TRIM47-206ENST00000592942 PAPLNO95428 1278 aa16.54■□□□□ 0.24
TRIM47-206ENST00000592942 CST3P01034 146 aaPredicted RBP16.54■□□□□ 0.24
TRIM47-206ENST00000592942 ITGB3P05106 788 aa16.54■□□□□ 0.24
TRIM47-206ENST00000592942 HOXB8P17481 243 aaPredicted RBP16.54■□□□□ 0.24
TRIM47-206ENST00000592942 OR1D2P34982 312 aa16.54■□□□□ 0.24
TRIM47-206ENST00000592942 PMS1P54277 932 aaKnown RBP16.54■□□□□ 0.24
TRIM47-206ENST00000592942 SMAD4Q13485 552 aaKnown RBP16.54■□□□□ 0.24
TRIM47-206ENST00000592942 RAB33AQ14088 237 aa16.54■□□□□ 0.24
TRIM47-206ENST00000592942 MORC3Q14149 939 aa16.54■□□□□ 0.24
TRIM47-206ENST00000592942 CAMK4Q16566 473 aa16.54■□□□□ 0.24
TRIM47-206ENST00000592942 DUOXA2Q1HG44 320 aa16.54■□□□□ 0.24
TRIM47-206ENST00000592942 PUS10Q3MIT2 529 aaKnown RBP16.54■□□□□ 0.24
TRIM47-206ENST00000592942 C1orf220Q5T0J3 134 aa16.54■□□□□ 0.24
TRIM47-206ENST00000592942 PDXDC1Q6P996 788 aa16.54■□□□□ 0.24
TRIM47-206ENST00000592942 ANKS3Q6ZW76 656 aa16.54■□□□□ 0.24
TRIM47-206ENST00000592942 WDR49Q8IV35 697 aa16.54■□□□□ 0.24
TRIM47-206ENST00000592942 CSGALNACT2Q8N6G5 542 aa16.54■□□□□ 0.24
TRIM47-206ENST00000592942 PARD3BQ8TEW8 1205 aa16.54■□□□□ 0.24
TRIM47-206ENST00000592942 CCDC127Q96BQ5 260 aa16.54■□□□□ 0.24
TRIM47-206ENST00000592942 MTMR12Q9C0I1 747 aa16.54■□□□□ 0.24
TRIM47-206ENST00000592942 CDH22Q9UJ99 828 aa16.54■□□□□ 0.24
TRIM47-206ENST00000592942 AGAP1Q9UPQ3 857 aa16.54■□□□□ 0.24
TRIM47-206ENST00000592942 PPP1R3GB7ZBB8 358 aa16.53■□□□□ 0.24
TRIM47-206ENST00000592942 CALUO43852 315 aaPredicted RBP16.53■□□□□ 0.24
TRIM47-206ENST00000592942 AKAP3O75969 853 aa16.53■□□□□ 0.24
TRIM47-206ENST00000592942 DLATP10515 647 aaKnown RBP16.53■□□□□ 0.24
TRIM47-206ENST00000592942 PAX3P23760 479 aa16.53■□□□□ 0.24
TRIM47-206ENST00000592942 POLR2BP30876 1174 aaKnown RBP16.53■□□□□ 0.24
TRIM47-206ENST00000592942 DLG4P78352 724 aa16.53■□□□□ 0.24
TRIM47-206ENST00000592942 CREMQ03060 361 aa16.53■□□□□ 0.24
TRIM47-206ENST00000592942 SMAD2Q15796 467 aaKnown RBP16.53■□□□□ 0.24
TRIM47-206ENST00000592942 ANKRD40Q6AI12 368 aa16.53■□□□□ 0.24
TRIM47-206ENST00000592942 SLC8B1Q6J4K2 584 aa16.53■□□□□ 0.24
TRIM47-206ENST00000592942 DSTYKQ6XUX3 929 aa16.53■□□□□ 0.24
TRIM47-206ENST00000592942 TRAPPC11Q7Z392 1133 aa16.53■□□□□ 0.24
TRIM47-206ENST00000592942 CGRRF1Q99675 332 aa16.53■□□□□ 0.24
TRIM47-206ENST00000592942 APOL5Q9BWW9 433 aa16.53■□□□□ 0.24
TRIM47-206ENST00000592942 KIAA1468Q9P260 1216 aa16.53■□□□□ 0.24
TRIM47-206ENST00000592942 ITGA11Q9UKX5 1188 aa16.53■□□□□ 0.24
TRIM47-206ENST00000592942 CDY1Q9Y6F8 540 aa16.53■□□□□ 0.24
TRIM47-206ENST00000592942 MTCL1Q9Y4B5 1905 aaKnown RBP16.53■□□□□ 0.24
TRIM47-206ENST00000592942 LRRIQ3A6PVS8 624 aaPredicted RBP16.52■□□□□ 0.24
TRIM47-206ENST00000592942 KPNA7A9QM74 516 aa16.52■□□□□ 0.24
TRIM47-206ENST00000592942 TULP1O00294 542 aaPredicted RBP16.52■□□□□ 0.24
TRIM47-206ENST00000592942 MAPK13O15264 365 aa16.52■□□□□ 0.24
TRIM47-206ENST00000592942 ABLIM3O94929 683 aa16.52■□□□□ 0.24
TRIM47-206ENST00000592942 GLUD1P00367 558 aa16.52■□□□□ 0.24
TRIM47-206ENST00000592942 C4BPAP04003 597 aaKnown RBP16.52■□□□□ 0.24
TRIM47-206ENST00000592942 CYP11A1P05108 521 aa16.52■□□□□ 0.24
TRIM47-206ENST00000592942 TYMPP19971 482 aa16.52■□□□□ 0.24
TRIM47-206ENST00000592942 NR2F2P24468 414 aa16.52■□□□□ 0.24
TRIM47-206ENST00000592942 TAF6P49848 677 aa16.52■□□□□ 0.24
TRIM47-206ENST00000592942 RBP5P82980 135 aa16.52■□□□□ 0.24
TRIM47-206ENST00000592942 ADAM9Q13443 819 aa16.52■□□□□ 0.24
TRIM47-206ENST00000592942 EDRF1Q3B7T1 1238 aa16.52■□□□□ 0.24
TRIM47-206ENST00000592942 ZC3H3Q8IXZ2 948 aaKnown RBP16.52■□□□□ 0.24
TRIM47-206ENST00000592942 APPL2Q8NEU8 664 aa16.52■□□□□ 0.24
TRIM47-206ENST00000592942 HDAC7Q8WUI4 952 aa16.52■□□□□ 0.24
TRIM47-206ENST00000592942 ANKRD36BP1Q96IX9 119 aa16.52■□□□□ 0.24
TRIM47-206ENST00000592942 NECAB3Q96P71 396 aaPredicted RBP16.52■□□□□ 0.24
TRIM47-206ENST00000592942 ADAM7Q9H2U9 754 aa16.52■□□□□ 0.24
TRIM47-206ENST00000592942 MAN1C1Q9NR34 630 aa16.52■□□□□ 0.24
TRIM47-206ENST00000592942 FBXL5Q9UKA1 691 aa16.52■□□□□ 0.24
TRIM47-206ENST00000592942 USP15Q9Y4E8 981 aaPredicted RBP16.52■□□□□ 0.24
TRIM47-206ENST00000592942 H7C4K7 107 aa16.51■□□□□ 0.23
TRIM47-206ENST00000592942 BIN1O00499 593 aa16.51■□□□□ 0.23
TRIM47-206ENST00000592942 CYB561D2O14569 222 aa16.51■□□□□ 0.23
TRIM47-206ENST00000592942 TMEM191BP0C7N4 346 aa16.51■□□□□ 0.23
TRIM47-206ENST00000592942 SRGAP2BP0DMP2 458 aa16.51■□□□□ 0.23
TRIM47-206ENST00000592942 TNNI1P19237 187 aa16.51■□□□□ 0.23
TRIM47-206ENST00000592942 ROR1Q01973 937 aa16.51■□□□□ 0.23
TRIM47-206ENST00000592942 YWHAHQ04917 246 aaPredicted RBP16.51■□□□□ 0.23
TRIM47-206ENST00000592942 RARS2Q5T160 578 aaKnown RBP16.51■□□□□ 0.23
TRIM47-206ENST00000592942 CEP135Q66GS9 1140 aa16.51■□□□□ 0.23
TRIM47-206ENST00000592942 LIMS2Q7Z4I7 341 aa16.51■□□□□ 0.23
TRIM47-206ENST00000592942 LRRC52Q8N7C0 313 aa16.51■□□□□ 0.23
TRIM47-206ENST00000592942 KREMEN2Q8NCW0 462 aa16.51■□□□□ 0.23
TRIM47-206ENST00000592942 GPT2Q8TD30 523 aa16.51■□□□□ 0.23
TRIM47-206ENST00000592942 TMC2Q8TDI7 906 aa16.51■□□□□ 0.23
TRIM47-206ENST00000592942 EEF2KMTQ96G04 330 aa16.51■□□□□ 0.23
TRIM47-206ENST00000592942 FNBP1Q96RU3 617 aa16.51■□□□□ 0.23
TRIM47-206ENST00000592942 RTP3Q9BQQ7 232 aa16.51■□□□□ 0.23
TRIM47-206ENST00000592942 GTPBP4Q9BZE4 634 aaKnown RBP16.51■□□□□ 0.23
TRIM47-206ENST00000592942 PLEKHA4Q9H4M7 779 aa16.51■□□□□ 0.23
TRIM47-206ENST00000592942 DZANK1Q9NVP4 752 aa16.51■□□□□ 0.23
TRIM47-206ENST00000592942 FBXW11Q9UKB1 542 aa16.51■□□□□ 0.23
TRIM47-206ENST00000592942 BDP1A6H8Y1 2624 aa16.51■□□□□ 0.23
TRIM47-206ENST00000592942 WDR27A2RRH5 827 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms