RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 PNPLA1Q8N8W4 532 aa8.17□□□□□ -1.1
VAT1-209ENST00000592388 LNX1Q8TBB1 728 aaPredicted RBP8.17□□□□□ -1.1
VAT1-209ENST00000592388 PIP4K2CQ8TBX8 421 aa8.17□□□□□ -1.1
VAT1-209ENST00000592388 PIGOQ8TEQ8 1089 aa8.17□□□□□ -1.1
VAT1-209ENST00000592388 HASPINQ8TF76 798 aa8.17□□□□□ -1.1
VAT1-209ENST00000592388 DEPDC1BQ8WUY9 529 aa8.17□□□□□ -1.1
VAT1-209ENST00000592388 PIGKQ92643 395 aa8.17□□□□□ -1.1
VAT1-209ENST00000592388 SMARCD2Q92925 531 aa8.17□□□□□ -1.1
VAT1-209ENST00000592388 MSANTD3Q96H12 275 aa8.17□□□□□ -1.1
VAT1-209ENST00000592388 ZFP42Q96MM3 310 aa8.17□□□□□ -1.1
VAT1-209ENST00000592388 POLR3FQ9H1D9 316 aaPredicted RBP8.17□□□□□ -1.1
VAT1-209ENST00000592388 NXF3Q9H4D5 531 aaKnown RBP8.17□□□□□ -1.1
VAT1-209ENST00000592388 ZSWIM4Q9H7M6 989 aa8.17□□□□□ -1.1
VAT1-209ENST00000592388 TTC12Q9H892 705 aaPredicted RBP8.17□□□□□ -1.1
VAT1-209ENST00000592388 GPRC5CQ9NQ84 441 aa8.17□□□□□ -1.1
VAT1-209ENST00000592388 ADAM28Q9UKQ2 775 aa8.17□□□□□ -1.1
VAT1-209ENST00000592388 IPPQ9Y573 584 aa8.17□□□□□ -1.1
VAT1-209ENST00000592388 NCANO14594 1321 aa8.17□□□□□ -1.1
VAT1-209ENST00000592388 TCHHQ07283 1943 aa8.17□□□□□ -1.1
VAT1-209ENST00000592388 EML5Q05BV3 1969 aa8.17□□□□□ -1.1
VAT1-209ENST00000592388 NUP205Q92621 2012 aa8.17□□□□□ -1.1
VAT1-209ENST00000592388 ATG2BQ96BY7 2078 aa8.17□□□□□ -1.1
VAT1-209ENST00000592388 WDR27A2RRH5 827 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 MYBPHLA2RUH7 354 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 ARL5CA6NH57 179 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 HEPACAM2A8MVW5 462 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 ITGA4P13612 1032 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 PTPN2P17706 415 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 ARF4P18085 180 aaPredicted RBP8.16□□□□□ -1.1
VAT1-209ENST00000592388 GLRA2P23416 452 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 MCM7P33993 719 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 TXKP42681 527 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 RARRES1P49788 294 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 NEK4P51957 841 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 MLLT6P55198 1093 aaPredicted RBP8.16□□□□□ -1.1
VAT1-209ENST00000592388 PTENP60484 403 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 LMAN2Q12907 356 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 SEMA3BQ13214 749 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 ANKRD1Q15327 319 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 AMHR2Q16671 573 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 TRIM61Q5EBN2 209 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 PRSS36Q5K4E3 855 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 FAM171A1Q5VUB5 890 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 CYP2U1Q7Z449 544 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 MFSD6LQ8IWD5 586 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 YAF2Q8IY57 180 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 SYNPOQ8N3V7 929 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 TCP11Q8WWU5 503 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 WASF1Q92558 559 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 DCBLD2Q96PD2 775 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 NAP1L4Q99733 375 aaKnown RBP8.16□□□□□ -1.1
VAT1-209ENST00000592388 CORO1BQ9BR76 489 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 TTPALQ9BTX7 342 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 BRMS1Q9HCU9 246 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 GTSE1Q9NYZ3 720 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 PCDHA12Q9UN75 941 aa8.16□□□□□ -1.1
VAT1-209ENST00000592388 GON4LQ3T8J9 2241 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 PLXNB3Q9ULL4 1909 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 TTLL13PA6NNM8 815 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 MED24O75448 989 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 BAG4O95429 457 aaKnown RBP8.15□□□□□ -1.1
VAT1-209ENST00000592388 NPTXRO95502 500 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 EDN1P05305 212 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 GJA1P17302 382 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 ENGP17813 658 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 AKAP5P24588 427 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 OR1D2P34982 312 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 ARL2P36404 184 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 CCR2P41597 374 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 ABCG1P45844 678 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 DHPSP49366 369 aaPredicted RBP8.15□□□□□ -1.1
VAT1-209ENST00000592388 CFHR1Q03591 330 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 CYP4F3Q08477 520 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 NBR1Q14596 966 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 KARSQ15046 597 aaKnown RBP8.15□□□□□ -1.1
VAT1-209ENST00000592388 PMS2CLQ68D20 193 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 NOTUMQ6P988 496 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 OTUD6AQ7L8S5 288 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 RALGPS2Q86X27 583 aaPredicted RBP8.15□□□□□ -1.1
VAT1-209ENST00000592388 GPIHBP1Q8IV16 184 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 CCDC83Q8IWF9 413 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 HDDC3Q8N4P3 179 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 CAMKK1Q8N5S9 505 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 ZSCAN18Q8TBC5 510 aaPredicted RBP8.15□□□□□ -1.1
VAT1-209ENST00000592388 ADAMTS14Q8WXS8 1223 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 BSNDQ8WZ55 320 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 RSPRY1Q96DX4 576 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 ZFYVE19Q96K21 471 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 CCDC43Q96MW1 224 aaKnown RBP8.15□□□□□ -1.1
VAT1-209ENST00000592388 MTMR9Q96QG7 549 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 HSD17B14Q9BPX1 270 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 NUSAP1Q9BXS6 441 aaKnown RBP8.15□□□□□ -1.1
VAT1-209ENST00000592388 CXCL16Q9H2A7 254 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 UBN1Q9NPG3 1134 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 AVENQ9NQS1 362 aaPredicted RBP8.15□□□□□ -1.1
VAT1-209ENST00000592388 PPP4R2Q9NY27 417 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 SNTG2Q9NY99 539 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 KLK14Q9P0G3 267 aa8.15□□□□□ -1.1
VAT1-209ENST00000592388 MBD1Q9UIS9 605 aaPredicted RBP8.15□□□□□ -1.1
VAT1-209ENST00000592388 USP20Q9Y2K6 914 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms