RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 CYP3A5P20815 502 aa15.08■□□□□ 0
CLIP3-205ENST00000592017 LRPAP1P30533 357 aa15.08■□□□□ 0
CLIP3-205ENST00000592017 CYP2J2P51589 502 aa15.08■□□□□ 0
CLIP3-205ENST00000592017 ZBTB6Q15916 424 aa15.08■□□□□ 0
CLIP3-205ENST00000592017 VARS2Q5ST30 1063 aaKnown RBP15.08■□□□□ 0
CLIP3-205ENST00000592017 SPATA1Q5VX52 437 aa15.08■□□□□ 0
CLIP3-205ENST00000592017 HS2ST1Q7LGA3 356 aa15.08■□□□□ 0
CLIP3-205ENST00000592017 BRSK2Q8IWQ3 736 aa15.08■□□□□ 0
CLIP3-205ENST00000592017 EFCAB13Q8IY85 973 aa15.08■□□□□ 0
CLIP3-205ENST00000592017 GPD1LQ8N335 351 aa15.08■□□□□ 0
CLIP3-205ENST00000592017 CCDC47Q96A33 483 aaKnown RBP15.08■□□□□ 0
CLIP3-205ENST00000592017 CCDC34Q96HJ3 373 aa15.08■□□□□ 0
CLIP3-205ENST00000592017 TSPAN18Q96SJ8 248 aa15.08■□□□□ 0
CLIP3-205ENST00000592017 KCNK12Q9HB15 430 aa15.08■□□□□ 0
CLIP3-205ENST00000592017 AGPAT3Q9NRZ7 376 aa15.08■□□□□ 0
CLIP3-205ENST00000592017 HSPBP1Q9NZL4 362 aa15.08■□□□□ 0
CLIP3-205ENST00000592017 DERAQ9Y315 318 aa15.08■□□□□ 0
CLIP3-205ENST00000592017 C2CD2Q9Y426 696 aa15.08■□□□□ 0
CLIP3-205ENST00000592017 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.08■□□□□ 0
CLIP3-205ENST00000592017 CDY1Q9Y6F8 540 aa15.08■□□□□ 0
CLIP3-205ENST00000592017 PIEZO1Q92508 2521 aa15.07■□□□□ 0
CLIP3-205ENST00000592017 PPEF2O14830 753 aa15.07■□□□□ 0
CLIP3-205ENST00000592017 CLIC2O15247 247 aa15.07■□□□□ 0
CLIP3-205ENST00000592017 TGFB1I1O43294 461 aa15.07■□□□□ 0
CLIP3-205ENST00000592017 TBC1D4O60343 1298 aa15.07■□□□□ 0
CLIP3-205ENST00000592017 C8AP07357 584 aa15.07■□□□□ 0
CLIP3-205ENST00000592017 HNRNPA1P09651 372 aaKnown RBP eCLIP15.07■□□□□ 0
CLIP3-205ENST00000592017 GBP2P32456 591 aaPredicted RBP15.07■□□□□ 0
CLIP3-205ENST00000592017 VCPP55072 806 aaKnown RBP15.07■□□□□ 0
CLIP3-205ENST00000592017 WNT7BP56706 349 aa15.07■□□□□ 0
CLIP3-205ENST00000592017 NTHL1P78549 312 aa15.07■□□□□ 0
CLIP3-205ENST00000592017 TFAMQ00059 246 aaKnown RBP15.07■□□□□ 0
CLIP3-205ENST00000592017 STK4Q13043 487 aa15.07■□□□□ 0
CLIP3-205ENST00000592017 MRPL58Q14197 206 aaKnown RBP15.07■□□□□ 0
CLIP3-205ENST00000592017 LIN9Q5TKA1 542 aa15.07■□□□□ 0
CLIP3-205ENST00000592017 DSTYKQ6XUX3 929 aa15.07■□□□□ 0
CLIP3-205ENST00000592017 ANKS3Q6ZW76 656 aa15.07■□□□□ 0
CLIP3-205ENST00000592017 GRASPQ7Z6J2 395 aaPredicted RBP15.07■□□□□ 0
CLIP3-205ENST00000592017 KIAA0895Q8NCT3 520 aa15.07■□□□□ 0
CLIP3-205ENST00000592017 RSAD2Q8WXG1 361 aa15.07■□□□□ 0
CLIP3-205ENST00000592017 CHMP5Q9NZZ3 219 aa15.07■□□□□ 0
CLIP3-205ENST00000592017 EPS15L1Q9UBC2 864 aa15.07■□□□□ 0
CLIP3-205ENST00000592017 ZNF318Q5VUA4 2279 aa15.06■□□□□ 0
CLIP3-205ENST00000592017 SYN3O14994 580 aa15.06■□□□□ 0
CLIP3-205ENST00000592017 KIAA0391O15091 583 aaKnown RBP15.06■□□□□ 0
CLIP3-205ENST00000592017 CCL16O15467 120 aa15.06■□□□□ 0
CLIP3-205ENST00000592017 POU5F1Q01860 360 aaKnown RBP15.06■□□□□ 0
CLIP3-205ENST00000592017 DPYDQ12882 1025 aa15.06■□□□□ 0
CLIP3-205ENST00000592017 PSMD2Q13200 908 aa15.06■□□□□ 0
CLIP3-205ENST00000592017 TDGQ13569 410 aa15.06■□□□□ 0
CLIP3-205ENST00000592017 KNOP1Q1ED39 458 aaKnown RBP15.06■□□□□ 0
CLIP3-205ENST00000592017 BMT2Q1RMZ1 405 aa15.06■□□□□ 0
CLIP3-205ENST00000592017 PPM1LQ5SGD2 360 aa15.06■□□□□ 0
CLIP3-205ENST00000592017 C9orf57Q5W0N0 161 aa15.06■□□□□ 0
CLIP3-205ENST00000592017 SLC8B1Q6J4K2 584 aa15.06■□□□□ 0
CLIP3-205ENST00000592017 CBWD2Q8IUF1 395 aa15.06■□□□□ 0
CLIP3-205ENST00000592017 SUGP1Q8IWZ8 645 aaKnown RBP15.06■□□□□ 0
CLIP3-205ENST00000592017 FMR1NBQ8N0W7 255 aaPredicted RBP15.06■□□□□ 0
CLIP3-205ENST00000592017 RDH13Q8NBN7 331 aa15.06■□□□□ 0
CLIP3-205ENST00000592017 SLC7A14Q8TBB6 771 aa15.06■□□□□ 0
CLIP3-205ENST00000592017 FAM84AQ96KN4 292 aa15.06■□□□□ 0
CLIP3-205ENST00000592017 SUSD3Q96L08 255 aa15.06■□□□□ 0
CLIP3-205ENST00000592017 PDE11AQ9HCR9 933 aa15.06■□□□□ 0
CLIP3-205ENST00000592017 DPP3Q9NY33 737 aa15.06■□□□□ 0
CLIP3-205ENST00000592017 ZNF233A6NK53 670 aa15.05■□□□□ -0
CLIP3-205ENST00000592017 ABLIM3O94929 683 aa15.05■□□□□ -0
CLIP3-205ENST00000592017 LAMP2P13473 410 aa15.05■□□□□ -0
CLIP3-205ENST00000592017 FSHRP23945 695 aa15.05■□□□□ -0
CLIP3-205ENST00000592017 AVPR2P30518 371 aa15.05■□□□□ -0
CLIP3-205ENST00000592017 HOXA9P31269 272 aa15.05■□□□□ -0
CLIP3-205ENST00000592017 ARPP19P56211 112 aa15.05■□□□□ -0
CLIP3-205ENST00000592017 ROR1Q01973 937 aa15.05■□□□□ -0
CLIP3-205ENST00000592017 FAM160A1Q05DH4 1040 aa15.05■□□□□ -0
CLIP3-205ENST00000592017 PNOCQ13519 176 aa15.05■□□□□ -0
CLIP3-205ENST00000592017 UVSSAQ2YD98 709 aa15.05■□□□□ -0
CLIP3-205ENST00000592017 LMBRD2Q68DH5 695 aaPredicted RBP15.05■□□□□ -0
CLIP3-205ENST00000592017 GET4Q7L5D6 327 aaPredicted RBP15.05■□□□□ -0
CLIP3-205ENST00000592017 APPL2Q8NEU8 664 aa15.05■□□□□ -0
CLIP3-205ENST00000592017 PRSS33Q8NF86 280 aa15.05■□□□□ -0
CLIP3-205ENST00000592017 ST13P5Q8NFI4 369 aaPredicted RBP15.05■□□□□ -0
CLIP3-205ENST00000592017 KCNH6Q9H252 994 aa15.05■□□□□ -0
CLIP3-205ENST00000592017 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.05■□□□□ -0
CLIP3-205ENST00000592017 IGSF9Q9P2J2 1179 aa15.05■□□□□ -0
CLIP3-205ENST00000592017 FBXL5Q9UKA1 691 aa15.05■□□□□ -0
CLIP3-205ENST00000592017 PCDHB8Q9UN66 801 aa15.05■□□□□ -0
CLIP3-205ENST00000592017 TIMM13Q9Y5L4 95 aaPredicted RBP15.05■□□□□ -0
CLIP3-205ENST00000592017 PLXNA3P51805 1871 aa15.05■□□□□ -0
CLIP3-205ENST00000592017 CITO14578 2027 aa15.05■□□□□ -0
CLIP3-205ENST00000592017 H7C4K7 107 aa15.04■□□□□ -0
CLIP3-205ENST00000592017 NARSO43776 548 aaKnown RBP15.04■□□□□ -0
CLIP3-205ENST00000592017 POU2F2P09086 479 aa15.04■□□□□ -0
CLIP3-205ENST00000592017 TMEM191BP0C7N4 346 aa15.04■□□□□ -0
CLIP3-205ENST00000592017 SNRNP35Q16560 246 aaKnown RBP15.04■□□□□ -0
CLIP3-205ENST00000592017 CTXN3Q4LDR2 81 aa15.04■□□□□ -0
CLIP3-205ENST00000592017 ZNF280DQ6N043 979 aa15.04■□□□□ -0
CLIP3-205ENST00000592017 SLC44A3Q8N4M1 653 aa15.04■□□□□ -0
CLIP3-205ENST00000592017 XXYLT1Q8NBI6 393 aa15.04■□□□□ -0
CLIP3-205ENST00000592017 ZNF461Q8TAF7 563 aa15.04■□□□□ -0
CLIP3-205ENST00000592017 ITFG1Q8TB96 612 aa15.04■□□□□ -0
CLIP3-205ENST00000592017 MTMR12Q9C0I1 747 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms