RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 MAN1B1Q9UKM7 699 aa12.46□□□□□ -0.41
VMP1-211ENST00000591315 PCDHB8Q9UN66 801 aa12.46□□□□□ -0.41
VMP1-211ENST00000591315 AGAP1Q9UPQ3 857 aa12.46□□□□□ -0.41
VMP1-211ENST00000591315 SSX2IPQ9Y2D8 614 aa12.46□□□□□ -0.41
VMP1-211ENST00000591315 BIN1O00499 593 aa12.45□□□□□ -0.42
VMP1-211ENST00000591315 KIAA0391O15091 583 aaKnown RBP12.45□□□□□ -0.42
VMP1-211ENST00000591315 EXOC3O60645 756 aa12.45□□□□□ -0.42
VMP1-211ENST00000591315 KINO60870 393 aaKnown RBP12.45□□□□□ -0.42
VMP1-211ENST00000591315 OR4Q2P0C623 313 aa12.45□□□□□ -0.42
VMP1-211ENST00000591315 DLATP10515 647 aaKnown RBP12.45□□□□□ -0.42
VMP1-211ENST00000591315 CD44P16070 742 aaKnown RBP12.45□□□□□ -0.42
VMP1-211ENST00000591315 BMP6P22004 513 aa12.45□□□□□ -0.42
VMP1-211ENST00000591315 PRCPP42785 496 aa12.45□□□□□ -0.42
VMP1-211ENST00000591315 UBE2HP62256 183 aa12.45□□□□□ -0.42
VMP1-211ENST00000591315 CAMK4Q16566 473 aa12.45□□□□□ -0.42
VMP1-211ENST00000591315 PPFIBP1Q86W92 1011 aa12.45□□□□□ -0.42
VMP1-211ENST00000591315 GPR65Q8IYL9 337 aa12.45□□□□□ -0.42
VMP1-211ENST00000591315 CSGALNACT2Q8N6G5 542 aa12.45□□□□□ -0.42
VMP1-211ENST00000591315 KREMEN2Q8NCW0 462 aa12.45□□□□□ -0.42
VMP1-211ENST00000591315 KHSRPQ92945 711 aaKnown RBP eCLIP12.45□□□□□ -0.42
VMP1-211ENST00000591315 SMARCE1Q969G3 411 aa12.45□□□□□ -0.42
VMP1-211ENST00000591315 CCDC47Q96A33 483 aaKnown RBP12.45□□□□□ -0.42
VMP1-211ENST00000591315 MFSD14AQ96MC6 490 aa12.45□□□□□ -0.42
VMP1-211ENST00000591315 TSPAN18Q96SJ8 248 aa12.45□□□□□ -0.42
VMP1-211ENST00000591315 TMEM209Q96SK2 561 aa12.45□□□□□ -0.42
VMP1-211ENST00000591315 FBXL5Q9UKA1 691 aa12.45□□□□□ -0.42
VMP1-211ENST00000591315 TSC2P49815 1807 aa12.44□□□□□ -0.42
VMP1-211ENST00000591315 PDXKO00764 312 aa12.44□□□□□ -0.42
VMP1-211ENST00000591315 SYN3O14994 580 aa12.44□□□□□ -0.42
VMP1-211ENST00000591315 KRT19P08727 400 aa12.44□□□□□ -0.42
VMP1-211ENST00000591315 HOXB8P17481 243 aaPredicted RBP12.44□□□□□ -0.42
VMP1-211ENST00000591315 PMS1P54277 932 aaKnown RBP12.44□□□□□ -0.42
VMP1-211ENST00000591315 SNRPFP62306 86 aaKnown RBP12.44□□□□□ -0.42
VMP1-211ENST00000591315 DLG4P78352 724 aa12.44□□□□□ -0.42
VMP1-211ENST00000591315 ROR1Q01973 937 aa12.44□□□□□ -0.42
VMP1-211ENST00000591315 ZP2Q05996 745 aa12.44□□□□□ -0.42
VMP1-211ENST00000591315 RAB33AQ14088 237 aa12.44□□□□□ -0.42
VMP1-211ENST00000591315 PSMD6Q15008 389 aa12.44□□□□□ -0.42
VMP1-211ENST00000591315 CTXN3Q4LDR2 81 aa12.44□□□□□ -0.42
VMP1-211ENST00000591315 ZCWPW2Q504Y3 356 aa12.44□□□□□ -0.42
VMP1-211ENST00000591315 C1orf220Q5T0J3 134 aa12.44□□□□□ -0.42
VMP1-211ENST00000591315 CEP135Q66GS9 1140 aa12.44□□□□□ -0.42
VMP1-211ENST00000591315 ANKS3Q6ZW76 656 aa12.44□□□□□ -0.42
VMP1-211ENST00000591315 GUF1Q8N442 669 aaKnown RBP12.44□□□□□ -0.42
VMP1-211ENST00000591315 ZNF707Q96C28 371 aaPredicted RBP12.44□□□□□ -0.42
VMP1-211ENST00000591315 RTP3Q9BQQ7 232 aa12.44□□□□□ -0.42
VMP1-211ENST00000591315 ADAM7Q9H2U9 754 aa12.44□□□□□ -0.42
VMP1-211ENST00000591315 POMKQ9H5K3 350 aa12.44□□□□□ -0.42
VMP1-211ENST00000591315 DZANK1Q9NVP4 752 aa12.44□□□□□ -0.42
VMP1-211ENST00000591315 FBXW11Q9UKB1 542 aa12.44□□□□□ -0.42
VMP1-211ENST00000591315 BACE2Q9Y5Z0 518 aa12.44□□□□□ -0.42
VMP1-211ENST00000591315 NOTCH4Q99466 2003 aa12.44□□□□□ -0.42
VMP1-211ENST00000591315 CCDC195A0A1B0GUA6 201 aa12.43□□□□□ -0.42
VMP1-211ENST00000591315 WDR27A2RRH5 827 aa12.43□□□□□ -0.42
VMP1-211ENST00000591315 TRIM49BA6NDI0 452 aa12.43□□□□□ -0.42
VMP1-211ENST00000591315 SPDYE4A6NLX3 237 aa12.43□□□□□ -0.42
VMP1-211ENST00000591315 LRRIQ3A6PVS8 624 aaPredicted RBP12.43□□□□□ -0.42
VMP1-211ENST00000591315 CYB561D2O14569 222 aa12.43□□□□□ -0.42
VMP1-211ENST00000591315 HCRTO43612 131 aa12.43□□□□□ -0.42
VMP1-211ENST00000591315 SMC2O95347 1197 aa12.43□□□□□ -0.42
VMP1-211ENST00000591315 SEC24AO95486 1093 aa12.43□□□□□ -0.42
VMP1-211ENST00000591315 VNN2O95498 520 aa12.43□□□□□ -0.42
VMP1-211ENST00000591315 CST3P01034 146 aaPredicted RBP12.43□□□□□ -0.42
VMP1-211ENST00000591315 TMEM191BP0C7N4 346 aa12.43□□□□□ -0.42
VMP1-211ENST00000591315 SRGAP2BP0DMP2 458 aa12.43□□□□□ -0.42
VMP1-211ENST00000591315 TNNI1P19237 187 aa12.43□□□□□ -0.42
VMP1-211ENST00000591315 TAF6P49848 677 aa12.43□□□□□ -0.42
VMP1-211ENST00000591315 BFSP1Q12934 665 aa12.43□□□□□ -0.42
VMP1-211ENST00000591315 CBX2Q14781 532 aaPredicted RBP12.43□□□□□ -0.42
VMP1-211ENST00000591315 PUS10Q3MIT2 529 aaKnown RBP12.43□□□□□ -0.42
VMP1-211ENST00000591315 ZNF658Q5TYW1 1059 aaPredicted RBP12.43□□□□□ -0.42
VMP1-211ENST00000591315 WSCD1Q658N2 575 aa12.43□□□□□ -0.42
VMP1-211ENST00000591315 CLEC17AQ6ZS10 378 aa12.43□□□□□ -0.42
VMP1-211ENST00000591315 SLC9A9Q8IVB4 645 aa12.43□□□□□ -0.42
VMP1-211ENST00000591315 APPL2Q8NEU8 664 aa12.43□□□□□ -0.42
VMP1-211ENST00000591315 OR10T2Q8NGX3 314 aa12.43□□□□□ -0.42
VMP1-211ENST00000591315 GOLGA5Q8TBA6 731 aa12.43□□□□□ -0.42
VMP1-211ENST00000591315 CACTINQ8WUQ7 758 aaKnown RBP12.43□□□□□ -0.42
VMP1-211ENST00000591315 RPGRIP1Q96KN7 1286 aa12.43□□□□□ -0.42
VMP1-211ENST00000591315 GSDMAQ96QA5 445 aa12.43□□□□□ -0.42
VMP1-211ENST00000591315 CGRRF1Q99675 332 aa12.43□□□□□ -0.42
VMP1-211ENST00000591315 KIAA1586Q9HCI6 787 aa12.43□□□□□ -0.42
VMP1-211ENST00000591315 LMBRD1Q9NUN5 540 aa12.43□□□□□ -0.42
VMP1-211ENST00000591315 CGNQ9P2M7 1197 aaKnown RBP12.43□□□□□ -0.42
VMP1-211ENST00000591315 TRAF3IP3Q9Y228 551 aa12.43□□□□□ -0.42
VMP1-211ENST00000591315 DOCK8Q8NF50 2099 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 FSD2A1L4K1 749 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 KPNA7A9QM74 516 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 CCL16O15467 120 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 CALUO43852 315 aaPredicted RBP12.42□□□□□ -0.42
VMP1-211ENST00000591315 ZMYND10O75800 440 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 AKAP3O75969 853 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 OAZ2O95190 189 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 NR2F2P24468 414 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 NTHL1P78549 312 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 RBP5P82980 135 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 CREMQ03060 361 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 YWHAHQ04917 246 aaPredicted RBP12.42□□□□□ -0.42
VMP1-211ENST00000591315 CCDC142Q17RM4 750 aa12.42□□□□□ -0.42
VMP1-211ENST00000591315 DUOXA2Q1HG44 320 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms