RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 PCDHB8Q9UN66 801 aa9.95□□□□□ -0.82
DNMT1-223ENST00000591239 ANK1P16157 1881 aa9.95□□□□□ -0.82
DNMT1-223ENST00000591239 CLIC2O15247 247 aa9.94□□□□□ -0.82
DNMT1-223ENST00000591239 SPTLC1O15269 473 aa9.94□□□□□ -0.82
DNMT1-223ENST00000591239 RHOBTB3O94955 611 aa9.94□□□□□ -0.82
DNMT1-223ENST00000591239 SP100P23497 879 aaPredicted RBP9.94□□□□□ -0.82
DNMT1-223ENST00000591239 PAX3P23760 479 aa9.94□□□□□ -0.82
DNMT1-223ENST00000591239 CYP2J2P51589 502 aa9.94□□□□□ -0.82
DNMT1-223ENST00000591239 YWHAHQ04917 246 aaPredicted RBP9.94□□□□□ -0.82
DNMT1-223ENST00000591239 SNW1Q13573 536 aaKnown RBP9.94□□□□□ -0.82
DNMT1-223ENST00000591239 CTXN3Q4LDR2 81 aa9.94□□□□□ -0.82
DNMT1-223ENST00000591239 SLC8B1Q6J4K2 584 aa9.94□□□□□ -0.82
DNMT1-223ENST00000591239 CYP26C1Q6V0L0 522 aa9.94□□□□□ -0.82
DNMT1-223ENST00000591239 DSTYKQ6XUX3 929 aa9.94□□□□□ -0.82
DNMT1-223ENST00000591239 CBWD2Q8IUF1 395 aa9.94□□□□□ -0.82
DNMT1-223ENST00000591239 XXYLT1Q8NBI6 393 aa9.94□□□□□ -0.82
DNMT1-223ENST00000591239 RDH13Q8NBN7 331 aa9.94□□□□□ -0.82
DNMT1-223ENST00000591239 ENGASEQ8NFI3 743 aa9.94□□□□□ -0.82
DNMT1-223ENST00000591239 CACTINQ8WUQ7 758 aaKnown RBP9.94□□□□□ -0.82
DNMT1-223ENST00000591239 KHSRPQ92945 711 aaKnown RBP eCLIP9.94□□□□□ -0.82
DNMT1-223ENST00000591239 CCDC47Q96A33 483 aaKnown RBP9.94□□□□□ -0.82
DNMT1-223ENST00000591239 CCDC34Q96HJ3 373 aa9.94□□□□□ -0.82
DNMT1-223ENST00000591239 SENP8Q96LD8 212 aa9.94□□□□□ -0.82
DNMT1-223ENST00000591239 TSHZ2Q9NRE2 1034 aa9.94□□□□□ -0.82
DNMT1-223ENST00000591239 ZDHHC7Q9NXF8 308 aa9.94□□□□□ -0.82
DNMT1-223ENST00000591239 FBXW11Q9UKB1 542 aa9.94□□□□□ -0.82
DNMT1-223ENST00000591239 NR2E1Q9Y466 385 aa9.94□□□□□ -0.82
DNMT1-223ENST00000591239 TIMM13Q9Y5L4 95 aaPredicted RBP9.94□□□□□ -0.82
DNMT1-223ENST00000591239 MTCL1Q9Y4B5 1905 aaKnown RBP9.94□□□□□ -0.82
DNMT1-223ENST00000591239 ZMYND10O75800 440 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 OAZ2O95190 189 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 PAPLNO95428 1278 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 ITGB3P05106 788 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 C8AP07357 584 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 ODC1P11926 461 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 ARPP19P56211 112 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 ROR1Q01973 937 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 FAM160A1Q05DH4 1040 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 KCNB1Q14721 858 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 SURF1Q15526 300 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 SNRNP35Q16560 246 aaKnown RBP9.93□□□□□ -0.82
DNMT1-223ENST00000591239 UVSSAQ2YD98 709 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 LIN9Q5TKA1 542 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 ZNF280DQ6N043 979 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 USP37Q86T82 979 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 RNF135Q8IUD6 432 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 C12orf56Q8IXR9 622 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 CSGALNACT2Q8N6G5 542 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 C1orf127Q8N9H9 656 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 ZNF461Q8TAF7 563 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 GOLGA5Q8TBA6 731 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 SLC7A14Q8TBB6 771 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 SMG7Q92540 1137 aaKnown RBP9.93□□□□□ -0.82
DNMT1-223ENST00000591239 ZNF707Q96C28 371 aaPredicted RBP9.93□□□□□ -0.82
DNMT1-223ENST00000591239 RHOBTB2Q9BYZ6 727 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 PRKD2Q9BZL6 878 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 KCTD10Q9H3F6 313 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 CHMP5Q9NZZ3 219 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 FBXL5Q9UKA1 691 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 ITGA11Q9UKX5 1188 aa9.93□□□□□ -0.82
DNMT1-223ENST00000591239 SCN1AP35498 2009 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 PTPRJQ12913 1337 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 ARHGEF37A1IGU5 675 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 WDR27A2RRH5 827 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 KPNA7A9QM74 516 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 PI4K2BG5E9Z4 385 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 PDXKO00764 312 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 CYB561D2O14569 222 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 ABLIM3O94929 683 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 KIF20AO95235 890 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 HNRNPA1P09651 372 aaKnown RBP eCLIP9.92□□□□□ -0.82
DNMT1-223ENST00000591239 TMEM191BP0C7N4 346 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 ATF2P15336 505 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 TYMPP19971 482 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 POLR2BP30876 1174 aaKnown RBP9.92□□□□□ -0.82
DNMT1-223ENST00000591239 HOXA9P31269 272 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 TAF6P49848 677 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 CYP24A1Q07973 514 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 PNOCQ13519 176 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 DUOXA2Q1HG44 320 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 SV2CQ496J9 727 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 PPM1LQ5SGD2 360 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 TPGS2Q68CL5 300 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 LMBRD2Q68DH5 695 aaPredicted RBP9.92□□□□□ -0.82
DNMT1-223ENST00000591239 OVOS1Q6IE37 1185 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 CCDC149Q6ZUS6 474 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 RTL10Q7L3V2 364 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 OR5B17Q8NGF7 314 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 CXorf38Q8TB03 319 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 TMEM174Q8WUU8 243 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 ANKRD36BP1Q96IX9 119 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 FAM84AQ96KN4 292 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 ZNF560Q96MR9 790 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 OXCT2Q9BYC2 517 aaPredicted RBP9.92□□□□□ -0.82
DNMT1-223ENST00000591239 MTMR12Q9C0I1 747 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 EPHX3Q9H6B9 360 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 PIDD1Q9HB75 910 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 WDR6Q9NNW5 1121 aaKnown RBP9.92□□□□□ -0.82
DNMT1-223ENST00000591239 INTS13Q9NVM9 706 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 DMAC2Q9NW81 257 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms