RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 PABPC4LP0CB38 370 aaKnown RBP16.04■□□□□ 0.16
CIRBP-228ENST00000590347 TPTE2Q6XPS3 522 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 ANKMY2Q8IV38 441 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 RAVER1Q8IY67 606 aaKnown RBP16.04■□□□□ 0.16
CIRBP-228ENST00000590347 RBM15BQ8NDT2 890 aaKnown RBP16.04■□□□□ 0.16
CIRBP-228ENST00000590347 SLC26A7Q8TE54 656 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 ZNF384Q8TF68 577 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 CATSPER2Q96P56 530 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 PRDM16Q9HAZ2 1276 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 ANGPTL2Q9UKU9 493 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 ANKRD62A6NC57 917 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 RPS6KA4O75676 772 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 STT3AP46977 705 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 NOP14P78316 857 aaKnown RBP16.04■□□□□ 0.16
CIRBP-228ENST00000590347 EPHA7Q15375 998 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 NADK2Q4G0N4 442 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 SLC45A4Q5BKX6 768 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 SH2D4BQ5SQS7 431 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 CLEC4GQ6UXB4 293 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 SLF2Q8IX21 1173 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 SEPT12Q8IYM1 358 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 PROM2Q8N271 834 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 RNF169Q8NCN4 708 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 OR6Y1Q8NGX8 325 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 OLIG1Q8TAK6 271 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 ZNF512BQ96KM6 892 aaPredicted RBP16.04■□□□□ 0.16
CIRBP-228ENST00000590347 TLE6Q9H808 572 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 NARFQ9UHQ1 456 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 ABCB11O95342 1321 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 MYO3BQ8WXR4 1341 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 KAT6AQ92794 2004 aa16.04■□□□□ 0.16
CIRBP-228ENST00000590347 ZSCAN5DPP0CG00 497 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 ATF2P15336 505 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 CTNNA2P26232 953 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 POLD1P28340 1107 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 PLCB3Q01970 1234 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 FBXL19Q6PCT2 694 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 NANOGNBQ7Z5D8 188 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 TRABD2AQ86V40 505 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 SLC15A3Q8IY34 581 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 METTL25Q8N6Q8 603 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 C7orf43Q8WVR3 580 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 ABHD8Q96I13 439 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 RIOK1Q9BRS2 568 aaKnown RBP16.03■□□□□ 0.16
CIRBP-228ENST00000590347 KCTD10Q9H3F6 313 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 MCM9Q9NXL9 1143 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 BARHL2Q9NY43 387 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 UBAP1Q9NZ09 502 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 MAD2L2Q9UI95 211 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 MTUS1Q9ULD2 1270 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 SYNGAP1Q96PV0 1343 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 CCDC88AQ3V6T2 1871 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 NAA20P61599 178 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 PDK4Q16654 411 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 GSTA3Q16772 222 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 ANKDD1AQ495B1 522 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 GRAMD4Q6IC98 578 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 LLGL2Q6P1M3 1020 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 SLC30A10Q6XR72 485 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 TSHZ1Q6ZSZ6 1077 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 GAB3Q8WWW8 586 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 PIGSQ96S52 555 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 MIS12Q9H081 205 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 ADGRA3Q8IWK6 1321 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 POTEFA5A3E0 1075 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 KLRF2D3W0D1 207 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 FCHO1O14526 889 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 TRAFD1O14545 582 aaPredicted RBP16.03■□□□□ 0.16
CIRBP-228ENST00000590347 PLSCR1O15162 318 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 TMEM253P0C7T8 217 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 POTEIP0CG38 1075 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 TROVE2P10155 538 aaKnown RBP eCLIP16.03■□□□□ 0.16
CIRBP-228ENST00000590347 MSLNQ13421 630 aaPredicted RBP16.03■□□□□ 0.16
CIRBP-228ENST00000590347 PEX6Q13608 980 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 TRIP10Q15642 601 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 C6orf183Q5T699 404 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 PPP1R2P3Q6NXS1 205 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 POTEGQ6S5H5 508 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 POTEEQ6S8J3 1075 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 RNF111Q6ZNA4 994 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 CCDC65Q8IXS2 484 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 PPP2R3CQ969Q6 453 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 TTC17Q96AE7 1141 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 GJD4Q96KN9 370 aaPredicted RBP16.03■□□□□ 0.16
CIRBP-228ENST00000590347 RBM15Q96T37 977 aaKnown RBP eCLIP16.03■□□□□ 0.16
CIRBP-228ENST00000590347 CYP4F11Q9HBI6 524 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 ZNF148Q9UQR1 794 aa16.03■□□□□ 0.16
CIRBP-228ENST00000590347 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.02■□□□□ 0.16
CIRBP-228ENST00000590347 CCDC195A0A1B0GUA6 201 aa16.02■□□□□ 0.16
CIRBP-228ENST00000590347 C2CD2LO14523 706 aa16.02■□□□□ 0.16
CIRBP-228ENST00000590347 SPTLC1O15269 473 aa16.02■□□□□ 0.16
CIRBP-228ENST00000590347 PDGFRBP09619 1106 aa16.02■□□□□ 0.16
CIRBP-228ENST00000590347 MYL2P10916 166 aa16.02■□□□□ 0.16
CIRBP-228ENST00000590347 NFKBIAP25963 317 aa16.02■□□□□ 0.16
CIRBP-228ENST00000590347 ASPHQ12797 758 aa16.02■□□□□ 0.16
CIRBP-228ENST00000590347 RASA3Q14644 834 aa16.02■□□□□ 0.16
CIRBP-228ENST00000590347 PDK3Q15120 406 aa16.02■□□□□ 0.16
CIRBP-228ENST00000590347 ZNF362Q5T0B9 420 aaPredicted RBP16.02■□□□□ 0.16
CIRBP-228ENST00000590347 TRAPPC3LQ5T215 181 aa16.02■□□□□ 0.16
CIRBP-228ENST00000590347 ZFPM1Q8IX07 1006 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms