RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 KIF2CQ99661 725 aa15.18■□□□□ 0.02
SF3A2-205ENST00000590034 LRRC3Q9BY71 257 aa15.18■□□□□ 0.02
SF3A2-205ENST00000590034 RAB34Q9BZG1 259 aa15.18■□□□□ 0.02
SF3A2-205ENST00000590034 DNAJC25Q9H1X3 360 aa15.18■□□□□ 0.02
SF3A2-205ENST00000590034 TRPV4Q9HBA0 871 aa15.18■□□□□ 0.02
SF3A2-205ENST00000590034 PARD6AQ9NPB6 346 aa15.18■□□□□ 0.02
SF3A2-205ENST00000590034 TRPV5Q9NQA5 729 aa15.18■□□□□ 0.02
SF3A2-205ENST00000590034 ASAH2Q9NR71 780 aa15.18■□□□□ 0.02
SF3A2-205ENST00000590034 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.18■□□□□ 0.02
SF3A2-205ENST00000590034 YIPF1Q9Y548 306 aa15.18■□□□□ 0.02
SF3A2-205ENST00000590034 TIMM13Q9Y5L4 95 aaPredicted RBP15.18■□□□□ 0.02
SF3A2-205ENST00000590034 STK24Q9Y6E0 443 aa15.18■□□□□ 0.02
SF3A2-205ENST00000590034 NUP210Q8TEM1 1887 aaPredicted RBP15.18■□□□□ 0.02
SF3A2-205ENST00000590034 KIF26AQ9ULI4 1882 aaPredicted RBP15.17■□□□□ 0.02
SF3A2-205ENST00000590034 MAN2B1O00754 1011 aa15.17■□□□□ 0.02
SF3A2-205ENST00000590034 PLS3P13797 630 aa15.17■□□□□ 0.02
SF3A2-205ENST00000590034 CPB1P15086 417 aa15.17■□□□□ 0.02
SF3A2-205ENST00000590034 PRPHP41219 470 aa15.17■□□□□ 0.02
SF3A2-205ENST00000590034 TNFSF9P41273 254 aa15.17■□□□□ 0.02
SF3A2-205ENST00000590034 GUCY2FP51841 1108 aa15.17■□□□□ 0.02
SF3A2-205ENST00000590034 ATXN1P54253 815 aaKnown RBP15.17■□□□□ 0.02
SF3A2-205ENST00000590034 MCL1Q07820 350 aa15.17■□□□□ 0.02
SF3A2-205ENST00000590034 WDR44Q5JSH3 913 aa15.17■□□□□ 0.02
SF3A2-205ENST00000590034 IQCEQ6IPM2 695 aa15.17■□□□□ 0.02
SF3A2-205ENST00000590034 TMC8Q8IU68 726 aa15.17■□□□□ 0.02
SF3A2-205ENST00000590034 ELMOD1Q8N336 334 aa15.17■□□□□ 0.02
SF3A2-205ENST00000590034 FAM3CQ92520 227 aa15.17■□□□□ 0.02
SF3A2-205ENST00000590034 PGLYRP2Q96PD5 576 aa15.17■□□□□ 0.02
SF3A2-205ENST00000590034 NPHP3-ACAD11A0A0J9YXS1 232 aa15.16■□□□□ 0.02
SF3A2-205ENST00000590034 TTC26A0AVF1 554 aa15.16■□□□□ 0.02
SF3A2-205ENST00000590034 HEPACAM2A8MVW5 462 aa15.16■□□□□ 0.02
SF3A2-205ENST00000590034 LAD1O00515 517 aa15.16■□□□□ 0.02
SF3A2-205ENST00000590034 PPEF2O14830 753 aa15.16■□□□□ 0.02
SF3A2-205ENST00000590034 OAZ2O95190 189 aa15.16■□□□□ 0.02
SF3A2-205ENST00000590034 CHRNB1P11230 501 aa15.16■□□□□ 0.02
SF3A2-205ENST00000590034 LRPAP1P30533 357 aa15.16■□□□□ 0.02
SF3A2-205ENST00000590034 AARSP49588 968 aaKnown RBP eCLIP15.16■□□□□ 0.02
SF3A2-205ENST00000590034 SLC12A3P55017 1021 aa15.16■□□□□ 0.02
SF3A2-205ENST00000590034 CACNB1Q02641 598 aaPredicted RBP15.16■□□□□ 0.02
SF3A2-205ENST00000590034 YWHAHQ04917 246 aaPredicted RBP15.16■□□□□ 0.02
SF3A2-205ENST00000590034 STRN3Q13033 797 aa15.16■□□□□ 0.02
SF3A2-205ENST00000590034 ZRSR1Q15695 479 aaKnown RBP15.16■□□□□ 0.02
SF3A2-205ENST00000590034 ZBTB6Q15916 424 aa15.16■□□□□ 0.02
SF3A2-205ENST00000590034 LPAL2Q16609 132 aa15.16■□□□□ 0.02
SF3A2-205ENST00000590034 HYIQ5T013 277 aa15.16■□□□□ 0.02
SF3A2-205ENST00000590034 STXBP5Q5T5C0 1151 aa15.16■□□□□ 0.02
SF3A2-205ENST00000590034 ZPBP2Q6X784 338 aa15.16■□□□□ 0.02
SF3A2-205ENST00000590034 DTHD1Q6ZMT9 781 aa15.16■□□□□ 0.02
SF3A2-205ENST00000590034 MAMSTRQ6ZN01 415 aa15.16■□□□□ 0.02
SF3A2-205ENST00000590034 LEMD2Q8NC56 503 aa15.16■□□□□ 0.02
SF3A2-205ENST00000590034 DEPDC1BQ8WUY9 529 aa15.16■□□□□ 0.02
SF3A2-205ENST00000590034 PLIN2Q99541 437 aa15.16■□□□□ 0.02
SF3A2-205ENST00000590034 TIPINQ9BVW5 301 aa15.16■□□□□ 0.02
SF3A2-205ENST00000590034 FAM126AQ9BYI3 521 aaPredicted RBP15.16■□□□□ 0.02
SF3A2-205ENST00000590034 LMAN1LQ9HAT1 526 aa15.16■□□□□ 0.02
SF3A2-205ENST00000590034 MAFFQ9ULX9 164 aa15.16■□□□□ 0.02
SF3A2-205ENST00000590034 SCN1AP35498 2009 aa15.16■□□□□ 0.02
SF3A2-205ENST00000590034 RALGAPA1Q6GYQ0 2036 aa15.16■□□□□ 0.02
SF3A2-205ENST00000590034 KMT2BQ9UMN6 2715 aaPredicted RBP15.15■□□□□ 0.02
SF3A2-205ENST00000590034 A0A1W2PRU2 124 aa15.15■□□□□ 0.02
SF3A2-205ENST00000590034 CLDN3O15551 220 aa15.15■□□□□ 0.02
SF3A2-205ENST00000590034 FAM189A1O60320 539 aa15.15■□□□□ 0.02
SF3A2-205ENST00000590034 CCNE1P24864 410 aa15.15■□□□□ 0.02
SF3A2-205ENST00000590034 SOX9P48436 509 aa15.15■□□□□ 0.02
SF3A2-205ENST00000590034 SATB1Q01826 763 aa15.15■□□□□ 0.02
SF3A2-205ENST00000590034 DMWDQ09019 674 aa15.15■□□□□ 0.02
SF3A2-205ENST00000590034 DUSP4Q13115 394 aa15.15■□□□□ 0.02
SF3A2-205ENST00000590034 GPIHBP1Q8IV16 184 aa15.15■□□□□ 0.02
SF3A2-205ENST00000590034 MFSD6LQ8IWD5 586 aa15.15■□□□□ 0.02
SF3A2-205ENST00000590034 TTC9BQ8N6N2 239 aa15.15■□□□□ 0.02
SF3A2-205ENST00000590034 SYT2Q8N9I0 419 aaPredicted RBP15.15■□□□□ 0.02
SF3A2-205ENST00000590034 LRRC15Q8TF66 581 aa15.15■□□□□ 0.02
SF3A2-205ENST00000590034 KIF12Q96FN5 646 aa15.15■□□□□ 0.02
SF3A2-205ENST00000590034 ZSCAN31Q96LW9 406 aaPredicted RBP15.15■□□□□ 0.02
SF3A2-205ENST00000590034 LRRC3BQ96PB8 259 aa15.15■□□□□ 0.02
SF3A2-205ENST00000590034 MKNK1Q9BUB5 465 aa15.15■□□□□ 0.02
SF3A2-205ENST00000590034 SH2B1Q9NRF2 756 aaPredicted RBP15.15■□□□□ 0.02
SF3A2-205ENST00000590034 SLC38A8A6NNN8 435 aa15.14■□□□□ 0.01
SF3A2-205ENST00000590034 ZNF263O14978 683 aa15.14■□□□□ 0.01
SF3A2-205ENST00000590034 CLTAP09496 248 aa15.14■□□□□ 0.01
SF3A2-205ENST00000590034 MARCKSP29966 332 aaPredicted RBP15.14■□□□□ 0.01
SF3A2-205ENST00000590034 ATP2C1P98194 919 aaPredicted RBP15.14■□□□□ 0.01
SF3A2-205ENST00000590034 LMNB2Q03252 620 aa15.14■□□□□ 0.01
SF3A2-205ENST00000590034 FCHO2Q0JRZ9 810 aa15.14■□□□□ 0.01
SF3A2-205ENST00000590034 ARSHQ5FYA8 562 aa15.14■□□□□ 0.01
SF3A2-205ENST00000590034 TXNDC11Q6PKC3 985 aa15.14■□□□□ 0.01
SF3A2-205ENST00000590034 GPR161Q8N6U8 529 aaKnown RBP15.14■□□□□ 0.01
SF3A2-205ENST00000590034 SECISBP2LQ93073 1101 aaKnown RBP15.14■□□□□ 0.01
SF3A2-205ENST00000590034 TMEM209Q96SK2 561 aa15.14■□□□□ 0.01
SF3A2-205ENST00000590034 IER2Q9BTL4 223 aa15.14■□□□□ 0.01
SF3A2-205ENST00000590034 SLITRK6Q9H5Y7 841 aa15.14■□□□□ 0.01
SF3A2-205ENST00000590034 PLEKHA5Q9HAU0 1116 aa15.14■□□□□ 0.01
SF3A2-205ENST00000590034 RBM12Q9NTZ6 932 aaKnown RBP15.14■□□□□ 0.01
SF3A2-205ENST00000590034 C2orf42Q9NWW7 574 aa15.14■□□□□ 0.01
SF3A2-205ENST00000590034 PPP4R2Q9NY27 417 aa15.14■□□□□ 0.01
SF3A2-205ENST00000590034 USP18Q9UMW8 372 aa15.14■□□□□ 0.01
SF3A2-205ENST00000590034 SLC27A5Q9Y2P5 690 aa15.14■□□□□ 0.01
SF3A2-205ENST00000590034 DENND4CQ5VZ89 1909 aa15.13■□□□□ 0.01
SF3A2-205ENST00000590034 SDK1Q7Z5N4 2213 aa15.13■□□□□ 0.01
SF3A2-205ENST00000590034 MTMR11A4FU01 709 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms