RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 UBR7Q8N806 425 aa18.69■□□□□ 0.58
CXXC1-212ENST00000589940 DBF4BQ8NFT6 615 aa18.69■□□□□ 0.58
CXXC1-212ENST00000589940 APBB2Q92870 758 aa18.69■□□□□ 0.58
CXXC1-212ENST00000589940 SCLYQ96I15 445 aa18.69■□□□□ 0.58
CXXC1-212ENST00000589940 SYT11Q9BT88 431 aa18.69■□□□□ 0.58
CXXC1-212ENST00000589940 CNTN6Q9UQ52 1028 aa18.69■□□□□ 0.58
CXXC1-212ENST00000589940 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.69■□□□□ 0.58
CXXC1-212ENST00000589940 TANC1Q9C0D5 1861 aa18.69■□□□□ 0.58
CXXC1-212ENST00000589940 GOLGA6L9A6NEM1 432 aa18.69■□□□□ 0.58
CXXC1-212ENST00000589940 EOMESO95936 686 aa18.69■□□□□ 0.58
CXXC1-212ENST00000589940 CLTBP09497 229 aa18.69■□□□□ 0.58
CXXC1-212ENST00000589940 CCL23P55773 120 aa18.69■□□□□ 0.58
CXXC1-212ENST00000589940 FAM189BP81408 668 aa18.69■□□□□ 0.58
CXXC1-212ENST00000589940 CYP27A1Q02318 531 aa18.69■□□□□ 0.58
CXXC1-212ENST00000589940 SOX4Q06945 474 aaPredicted RBP18.69■□□□□ 0.58
CXXC1-212ENST00000589940 BMS1Q14692 1282 aaKnown RBP18.69■□□□□ 0.58
CXXC1-212ENST00000589940 SCARA5Q6ZMJ2 495 aa18.69■□□□□ 0.58
CXXC1-212ENST00000589940 EPS8L1Q8TE68 723 aa18.69■□□□□ 0.58
CXXC1-212ENST00000589940 BCO2Q9BYV7 579 aa18.69■□□□□ 0.58
CXXC1-212ENST00000589940 TMEM39AQ9NV64 488 aa18.69■□□□□ 0.58
CXXC1-212ENST00000589940 POLIQ9UNA4 740 aa18.69■□□□□ 0.58
CXXC1-212ENST00000589940 PCDHB4Q9Y5E5 795 aa18.69■□□□□ 0.58
CXXC1-212ENST00000589940 A0A087X0T9 212 aa18.68■□□□□ 0.58
CXXC1-212ENST00000589940 PPEF2O14830 753 aa18.68■□□□□ 0.58
CXXC1-212ENST00000589940 CXCL10P02778 98 aa18.68■□□□□ 0.58
CXXC1-212ENST00000589940 THP07101 528 aa18.68■□□□□ 0.58
CXXC1-212ENST00000589940 FAM228BP0C875 321 aa18.68■□□□□ 0.58
CXXC1-212ENST00000589940 IBSPP21815 317 aaPredicted RBP18.68■□□□□ 0.58
CXXC1-212ENST00000589940 CYP2C18P33260 490 aa18.68■□□□□ 0.58
CXXC1-212ENST00000589940 TMEM270Q6UE05 265 aa18.68■□□□□ 0.58
CXXC1-212ENST00000589940 SLC47A2Q86VL8 602 aa18.68■□□□□ 0.58
CXXC1-212ENST00000589940 CISHQ9NSE2 258 aa18.68■□□□□ 0.58
CXXC1-212ENST00000589940 PIRO00625 290 aa18.68■□□□□ 0.58
CXXC1-212ENST00000589940 CYP11B1P15538 503 aa18.68■□□□□ 0.58
CXXC1-212ENST00000589940 LRPAP1P30533 357 aa18.68■□□□□ 0.58
CXXC1-212ENST00000589940 PDE6CP51160 858 aa18.68■□□□□ 0.58
CXXC1-212ENST00000589940 SCNN1GP51170 649 aa18.68■□□□□ 0.58
CXXC1-212ENST00000589940 AFF1P51825 1210 aaKnown RBP18.68■□□□□ 0.58
CXXC1-212ENST00000589940 YWHAEP62258 255 aaKnown RBP18.68■□□□□ 0.58
CXXC1-212ENST00000589940 GOLGA2P5Q9HBQ8 144 aa18.68■□□□□ 0.58
CXXC1-212ENST00000589940 NOCTQ9UK39 431 aaKnown RBP18.68■□□□□ 0.58
CXXC1-212ENST00000589940 WEE2P0C1S8 567 aa18.67■□□□□ 0.58
CXXC1-212ENST00000589940 PNPLA4P41247 253 aa18.67■□□□□ 0.58
CXXC1-212ENST00000589940 BPIFB4P59827 614 aa18.67■□□□□ 0.58
CXXC1-212ENST00000589940 TNNC1P63316 161 aa18.67■□□□□ 0.58
CXXC1-212ENST00000589940 NAB2Q15742 525 aa18.67■□□□□ 0.58
CXXC1-212ENST00000589940 NOP9Q86U38 636 aaKnown RBP18.67■□□□□ 0.58
CXXC1-212ENST00000589940 OLIG1Q8TAK6 271 aa18.67■□□□□ 0.58
CXXC1-212ENST00000589940 ZNF560Q96MR9 790 aa18.67■□□□□ 0.58
CXXC1-212ENST00000589940 AGPAT1Q99943 283 aa18.67■□□□□ 0.58
CXXC1-212ENST00000589940 CYP3A43Q9HB55 503 aa18.67■□□□□ 0.58
CXXC1-212ENST00000589940 ACP6Q9NPH0 428 aa18.67■□□□□ 0.58
CXXC1-212ENST00000589940 MIOSQ9NXC5 875 aa18.67■□□□□ 0.58
CXXC1-212ENST00000589940 DDX3XO00571 662 aaKnown RBP eCLIP18.66■□□□□ 0.582e-7■■□□□ 13.3
CXXC1-212ENST00000589940 CD58P19256 250 aa18.66■□□□□ 0.58
CXXC1-212ENST00000589940 ZNF132P52740 706 aa18.66■□□□□ 0.58
CXXC1-212ENST00000589940 RBBP8NLQ8NC74 664 aaPredicted RBP18.66■□□□□ 0.58
CXXC1-212ENST00000589940 SLC20A1Q8WUM9 679 aa18.66■□□□□ 0.58
CXXC1-212ENST00000589940 SMYD3Q9H7B4 428 aa18.66■□□□□ 0.58
CXXC1-212ENST00000589940 RRAGDQ9NQL2 400 aaPredicted RBP18.66■□□□□ 0.58
CXXC1-212ENST00000589940 PCDHA13Q9Y5I0 950 aa18.66■□□□□ 0.58
CXXC1-212ENST00000589940 ENPP3O14638 875 aa18.66■□□□□ 0.58
CXXC1-212ENST00000589940 INPPL1O15357 1258 aa18.66■□□□□ 0.58
CXXC1-212ENST00000589940 KIAA1328Q86T90 577 aa18.66■□□□□ 0.58
CXXC1-212ENST00000589940 GLYCTKQ8IVS8 523 aa18.66■□□□□ 0.58
CXXC1-212ENST00000589940 SLC30A5Q8TAD4 765 aa18.66■□□□□ 0.58
CXXC1-212ENST00000589940 LNX1Q8TBB1 728 aaPredicted RBP18.66■□□□□ 0.58
CXXC1-212ENST00000589940 FAM124BQ9H5Z6 455 aaPredicted RBP18.66■□□□□ 0.58
CXXC1-212ENST00000589940 LUC7LQ9NQ29 371 aaKnown RBP18.66■□□□□ 0.58
CXXC1-212ENST00000589940 NAGPAQ9UK23 515 aa18.66■□□□□ 0.58
CXXC1-212ENST00000589940 TNFAIP3P21580 790 aa18.65■□□□□ 0.58
CXXC1-212ENST00000589940 VAV2P52735 878 aa18.65■□□□□ 0.58
CXXC1-212ENST00000589940 NENFQ9UMX5 172 aa18.65■□□□□ 0.58
CXXC1-212ENST00000589940 A0A0U1RQJ8 604 aa18.65■□□□□ 0.58
CXXC1-212ENST00000589940 MAGEA1P43355 309 aa18.65■□□□□ 0.58
CXXC1-212ENST00000589940 RAP1GAPP47736 663 aa18.65■□□□□ 0.58
CXXC1-212ENST00000589940 CDR2Q01850 454 aa18.65■□□□□ 0.58
CXXC1-212ENST00000589940 GRIK3Q13003 919 aa18.65■□□□□ 0.58
CXXC1-212ENST00000589940 C10orf76Q5T2E6 689 aa18.65■□□□□ 0.58
CXXC1-212ENST00000589940 ALKBH5Q6P6C2 394 aaKnown RBP18.65■□□□□ 0.58
CXXC1-212ENST00000589940 GLB1LQ6UWU2 654 aa18.65■□□□□ 0.58
CXXC1-212ENST00000589940 ZNF662Q6ZS27 426 aa18.65■□□□□ 0.58
CXXC1-212ENST00000589940 RPUSD2Q8IZ73 545 aaKnown RBP18.65■□□□□ 0.58
CXXC1-212ENST00000589940 ATRIPQ8WXE1 791 aa18.65■□□□□ 0.58
CXXC1-212ENST00000589940 DDX1Q92499 740 aaKnown RBP18.65■□□□□ 0.58
CXXC1-212ENST00000589940 MMS19Q96T76 1030 aa18.65■□□□□ 0.58
CXXC1-212ENST00000589940 SDCBP2Q9H190 292 aa18.65■□□□□ 0.58
CXXC1-212ENST00000589940 ELAC1Q9H777 363 aaKnown RBP18.65■□□□□ 0.58
CXXC1-212ENST00000589940 LZTFL1Q9NQ48 299 aa18.65■□□□□ 0.58
CXXC1-212ENST00000589940 TMEM161AQ9NX61 479 aa18.65■□□□□ 0.58
CXXC1-212ENST00000589940 SNX9Q9Y5X1 595 aa18.65■□□□□ 0.58
CXXC1-212ENST00000589940 SCN1AP35498 2009 aa18.64■□□□□ 0.57
CXXC1-212ENST00000589940 TAF6P49848 677 aa18.64■□□□□ 0.57
CXXC1-212ENST00000589940 CDH8P55286 799 aa18.64■□□□□ 0.57
CXXC1-212ENST00000589940 TCTN1Q2MV58 587 aa18.64■□□□□ 0.57
CXXC1-212ENST00000589940 ARHGAP29Q52LW3 1261 aa18.64■□□□□ 0.57
CXXC1-212ENST00000589940 TAF3Q5VWG9 929 aa18.64■□□□□ 0.57
CXXC1-212ENST00000589940 NYAP1Q6ZVC0 841 aa18.64■□□□□ 0.57
CXXC1-212ENST00000589940 ZNF677Q86XU0 584 aa18.64■□□□□ 0.57
CXXC1-212ENST00000589940 TXLNBQ8N3L3 684 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms