RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 TAF4BQ92750 862 aa26.56■■□□□ 1.84
RFX1-205ENST00000589239 CASD1Q96PB1 797 aa26.56■■□□□ 1.84
RFX1-205ENST00000589239 TBC1D13Q9NVG8 400 aa26.56■■□□□ 1.84
RFX1-205ENST00000589239 POLIQ9UNA4 740 aa26.56■■□□□ 1.84
RFX1-205ENST00000589239 DAAM1Q9Y4D1 1078 aa26.56■■□□□ 1.84
RFX1-205ENST00000589239 MFAP3P55082 362 aa26.55■■□□□ 1.84
RFX1-205ENST00000589239 WDR5P61964 334 aaKnown RBP26.55■■□□□ 1.84
RFX1-205ENST00000589239 DEFB103AP81534 67 aa26.55■■□□□ 1.84
RFX1-205ENST00000589239 MYO1EQ12965 1108 aa26.55■■□□□ 1.84
RFX1-205ENST00000589239 ZNF667Q5HYK9 610 aa26.55■■□□□ 1.84
RFX1-205ENST00000589239 SCARA5Q6ZMJ2 495 aa26.55■■□□□ 1.84
RFX1-205ENST00000589239 TMCO2Q7Z6W1 182 aaPredicted RBP26.55■■□□□ 1.84
RFX1-205ENST00000589239 KIAA1524Q8TCG1 905 aa26.55■■□□□ 1.84
RFX1-205ENST00000589239 PANX2Q96RD6 677 aa26.55■■□□□ 1.84
RFX1-205ENST00000589239 NIF3L1Q9GZT8 377 aa26.55■■□□□ 1.84
RFX1-205ENST00000589239 VRTNQ9H8Y1 702 aa26.55■■□□□ 1.84
RFX1-205ENST00000589239 LTBP2Q14767 1821 aa26.55■■□□□ 1.84
RFX1-205ENST00000589239 IGFBP6P24592 240 aaPredicted RBP26.54■■□□□ 1.84
RFX1-205ENST00000589239 ZNF365Q70YC5 407 aa26.54■■□□□ 1.84
RFX1-205ENST00000589239 ZNF280BQ86YH2 543 aa26.54■■□□□ 1.84
RFX1-205ENST00000589239 LRRC52Q8N7C0 313 aa26.54■■□□□ 1.84
RFX1-205ENST00000589239 KCNF1Q9H3M0 494 aa26.54■■□□□ 1.84
RFX1-205ENST00000589239 SCN1AP35498 2009 aa26.54■■□□□ 1.84
RFX1-205ENST00000589239 B4GALT3O60512 393 aa26.54■■□□□ 1.84
RFX1-205ENST00000589239 DDHD2O94830 711 aa26.54■■□□□ 1.84
RFX1-205ENST00000589239 ASPAP45381 313 aa26.54■■□□□ 1.84
RFX1-205ENST00000589239 ARID5AQ03989 594 aa26.54■■□□□ 1.84
RFX1-205ENST00000589239 TUSC3Q13454 348 aa26.54■■□□□ 1.84
RFX1-205ENST00000589239 ANKRD7Q92527 254 aa26.54■■□□□ 1.84
RFX1-205ENST00000589239 FOXN3O00409 490 aaPredicted RBP26.53■■□□□ 1.84
RFX1-205ENST00000589239 HOXA2O43364 376 aa26.53■■□□□ 1.84
RFX1-205ENST00000589239 EFCAB14O75071 495 aa26.53■■□□□ 1.84
RFX1-205ENST00000589239 BAIAP3O94812 1187 aa26.53■■□□□ 1.84
RFX1-205ENST00000589239 STAU1O95793 577 aaKnown RBP26.53■■□□□ 1.84
RFX1-205ENST00000589239 WDR59Q6PJI9 974 aa26.53■■□□□ 1.84
RFX1-205ENST00000589239 TOP1MTQ969P6 601 aa26.53■■□□□ 1.84
RFX1-205ENST00000589239 RNF216Q9NWF9 866 aaPredicted RBP26.53■■□□□ 1.84
RFX1-205ENST00000589239 KANSL3Q9P2N6 904 aa26.53■■□□□ 1.84
RFX1-205ENST00000589239 TDRD15B5MCY1 1934 aaKnown RBP26.53■■□□□ 1.84
RFX1-205ENST00000589239 PODXLO00592 558 aa26.53■■□□□ 1.84
RFX1-205ENST00000589239 SPTLC1O15269 473 aa26.53■■□□□ 1.84
RFX1-205ENST00000589239 AMHP03971 560 aa26.53■■□□□ 1.84
RFX1-205ENST00000589239 TBXAS1P24557 533 aaPredicted RBP26.53■■□□□ 1.84
RFX1-205ENST00000589239 RNASELQ05823 741 aaKnown RBP26.53■■□□□ 1.84
RFX1-205ENST00000589239 TSR1Q2NL82 804 aaKnown RBP26.53■■□□□ 1.84
RFX1-205ENST00000589239 SFMBT2Q5VUG0 894 aa26.53■■□□□ 1.84
RFX1-205ENST00000589239 ENOSF1Q7L5Y1 443 aa26.53■■□□□ 1.84
RFX1-205ENST00000589239 NUCKS1Q9H1E3 243 aaKnown RBP26.53■■□□□ 1.84
RFX1-205ENST00000589239 MYO6Q9UM54 1294 aa26.53■■□□□ 1.84
RFX1-205ENST00000589239 FGBP02675 491 aa26.52■■□□□ 1.84
RFX1-205ENST00000589239 STAT1P42224 750 aa26.52■■□□□ 1.84
RFX1-205ENST00000589239 UPP1Q16831 310 aa26.52■■□□□ 1.84
RFX1-205ENST00000589239 SHC3Q92529 594 aa26.52■■□□□ 1.84
RFX1-205ENST00000589239 FAM81BQ96LP2 452 aa26.52■■□□□ 1.84
RFX1-205ENST00000589239 ZNF560Q96MR9 790 aa26.52■■□□□ 1.84
RFX1-205ENST00000589239 SNX9Q9Y5X1 595 aa26.52■■□□□ 1.84
RFX1-205ENST00000589239 TBKBP1A7MCY6 615 aa26.51■■□□□ 1.84
RFX1-205ENST00000589239 GFPT2O94808 682 aa26.51■■□□□ 1.84
RFX1-205ENST00000589239 WEE2P0C1S8 567 aa26.51■■□□□ 1.84
RFX1-205ENST00000589239 SOX5P35711 763 aa26.51■■□□□ 1.84
RFX1-205ENST00000589239 FAM117BQ6P1L5 589 aa26.51■■□□□ 1.84
RFX1-205ENST00000589239 TMEM139Q8IV31 216 aa26.51■■□□□ 1.84
RFX1-205ENST00000589239 C3orf58Q8NDZ4 430 aa26.51■■□□□ 1.84
RFX1-205ENST00000589239 BAG1Q99933 345 aaPredicted RBP26.51■■□□□ 1.84
RFX1-205ENST00000589239 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.51■■□□□ 1.84
RFX1-205ENST00000589239 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.51■■□□□ 1.84
RFX1-205ENST00000589239 ZBBXA8MT70 800 aa26.51■■□□□ 1.83
RFX1-205ENST00000589239 CTIFO43310 598 aaKnown RBP26.51■■□□□ 1.83
RFX1-205ENST00000589239 HNRNPH3P31942 346 aaKnown RBP26.51■■□□□ 1.83
RFX1-205ENST00000589239 RPL9P32969 192 aaKnown RBP26.51■■□□□ 1.83
RFX1-205ENST00000589239 USP8P40818 1118 aa26.51■■□□□ 1.83
RFX1-205ENST00000589239 RAP1GAPP47736 663 aa26.51■■□□□ 1.83
RFX1-205ENST00000589239 TAF6P49848 677 aa26.51■■□□□ 1.83
RFX1-205ENST00000589239 LILRA4P59901 499 aa26.51■■□□□ 1.83
RFX1-205ENST00000589239 DSC1Q08554 894 aa26.51■■□□□ 1.83
RFX1-205ENST00000589239 PAN2Q504Q3 1202 aaKnown RBP26.51■■□□□ 1.83
RFX1-205ENST00000589239 SMYD3Q9H7B4 428 aa26.51■■□□□ 1.83
RFX1-205ENST00000589239 AIPL1Q9NZN9 384 aa26.51■■□□□ 1.83
RFX1-205ENST00000589239 HCSTQ9UBK5 93 aa26.51■■□□□ 1.83
RFX1-205ENST00000589239 DGKIO75912 1065 aa26.5■■□□□ 1.83
RFX1-205ENST00000589239 CD58P19256 250 aa26.5■■□□□ 1.83
RFX1-205ENST00000589239 ACO1P21399 889 aaKnown RBP26.5■■□□□ 1.83
RFX1-205ENST00000589239 PNPLA4P41247 253 aa26.5■■□□□ 1.83
RFX1-205ENST00000589239 CDH8P55286 799 aa26.5■■□□□ 1.83
RFX1-205ENST00000589239 TNNC1P63316 161 aa26.5■■□□□ 1.83
RFX1-205ENST00000589239 CCZ1BP86790 482 aa26.5■■□□□ 1.83
RFX1-205ENST00000589239 CCZ1P86791 482 aaPredicted RBP26.5■■□□□ 1.83
RFX1-205ENST00000589239 TMEM240Q5SV17 173 aa26.5■■□□□ 1.83
RFX1-205ENST00000589239 SYN2Q92777 582 aaPredicted RBP26.5■■□□□ 1.83
RFX1-205ENST00000589239 MMS19Q96T76 1030 aa26.5■■□□□ 1.83
RFX1-205ENST00000589239 CHP1Q99653 195 aa26.5■■□□□ 1.83
RFX1-205ENST00000589239 ZNHIT6Q9NWK9 470 aaKnown RBP26.5■■□□□ 1.83
RFX1-205ENST00000589239 DNAJB4Q9UDY4 337 aa26.5■■□□□ 1.83
RFX1-205ENST00000589239 KPNA7A9QM74 516 aa26.5■■□□□ 1.83
RFX1-205ENST00000589239 SKILP12757 684 aa26.5■■□□□ 1.83
RFX1-205ENST00000589239 KCNJ6P48051 423 aa26.5■■□□□ 1.83
RFX1-205ENST00000589239 MEA1Q16626 185 aa26.5■■□□□ 1.83
RFX1-205ENST00000589239 COLGALT2Q8IYK4 626 aa26.5■■□□□ 1.83
RFX1-205ENST00000589239 FAM193BQ96PV7 902 aaPredicted RBP26.5■■□□□ 1.83
RFX1-205ENST00000589239 BCO2Q9BYV7 579 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms