RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 DDX12PQ92771 950 aa16.53■□□□□ 0.24
SF3A2-204ENST00000589118 TBC1D32Q96NH3 1257 aa16.53■□□□□ 0.24
SF3A2-204ENST00000589118 ACO2Q99798 780 aaKnown RBP16.53■□□□□ 0.24
SF3A2-204ENST00000589118 POLR3CQ9BUI4 534 aaPredicted RBP16.53■□□□□ 0.24
SF3A2-204ENST00000589118 CCDC94Q9BW85 323 aaPredicted RBP16.53■□□□□ 0.24
SF3A2-204ENST00000589118 TARS2Q9BW92 718 aaKnown RBP16.53■□□□□ 0.24
SF3A2-204ENST00000589118 ASAH2Q9NR71 780 aa16.53■□□□□ 0.24
SF3A2-204ENST00000589118 ANGPTL2Q9UKU9 493 aa16.53■□□□□ 0.24
SF3A2-204ENST00000589118 TNFSF13BQ9Y275 285 aa16.53■□□□□ 0.24
SF3A2-204ENST00000589118 SLC27A5Q9Y2P5 690 aa16.53■□□□□ 0.24
SF3A2-204ENST00000589118 CCDC169A6NNP5 214 aa16.52■□□□□ 0.24
SF3A2-204ENST00000589118 SPECC1L-ADORA2AF8WAN1 911 aa16.52■□□□□ 0.24
SF3A2-204ENST00000589118 H7C4K7 107 aa16.52■□□□□ 0.24
SF3A2-204ENST00000589118 TM4SF5O14894 197 aa16.52■□□□□ 0.24
SF3A2-204ENST00000589118 PMLP29590 882 aa16.52■□□□□ 0.24
SF3A2-204ENST00000589118 MCM4P33991 863 aa16.52■□□□□ 0.24
SF3A2-204ENST00000589118 YARSP54577 528 aaKnown RBP16.52■□□□□ 0.24
SF3A2-204ENST00000589118 EPHA5P54756 1037 aa16.52■□□□□ 0.24
SF3A2-204ENST00000589118 PEX3P56589 373 aa16.52■□□□□ 0.24
SF3A2-204ENST00000589118 TPGS2Q68CL5 300 aa16.52■□□□□ 0.24
SF3A2-204ENST00000589118 IL31Q6EBC2 164 aa16.52■□□□□ 0.24
SF3A2-204ENST00000589118 TMC8Q8IU68 726 aa16.52■□□□□ 0.24
SF3A2-204ENST00000589118 ARID3BQ8IVW6 561 aaPredicted RBP16.52■□□□□ 0.24
SF3A2-204ENST00000589118 DNAJC25Q9H1X3 360 aa16.52■□□□□ 0.24
SF3A2-204ENST00000589118 BHMT2Q9H2M3 363 aa16.52■□□□□ 0.24
SF3A2-204ENST00000589118 TRPV4Q9HBA0 871 aa16.52■□□□□ 0.24
SF3A2-204ENST00000589118 PTPRHQ9HD43 1115 aa16.52■□□□□ 0.24
SF3A2-204ENST00000589118 TUBGCP4Q9UGJ1 667 aa16.52■□□□□ 0.24
SF3A2-204ENST00000589118 AFF4Q9UHB7 1163 aaKnown RBP16.52■□□□□ 0.24
SF3A2-204ENST00000589118 YIPF1Q9Y548 306 aa16.52■□□□□ 0.24
SF3A2-204ENST00000589118 SYN3O14994 580 aa16.51■□□□□ 0.23
SF3A2-204ENST00000589118 HOXB3P14651 431 aaPredicted RBP16.51■□□□□ 0.23
SF3A2-204ENST00000589118 DUSP4Q13115 394 aa16.51■□□□□ 0.23
SF3A2-204ENST00000589118 ME3Q16798 604 aa16.51■□□□□ 0.23
SF3A2-204ENST00000589118 KBTBD6Q86V97 674 aa16.51■□□□□ 0.23
SF3A2-204ENST00000589118 TTC9BQ8N6N2 239 aa16.51■□□□□ 0.23
SF3A2-204ENST00000589118 SUSD3Q96L08 255 aa16.51■□□□□ 0.23
SF3A2-204ENST00000589118 IFT74Q96LB3 600 aa16.51■□□□□ 0.23
SF3A2-204ENST00000589118 IER2Q9BTL4 223 aa16.51■□□□□ 0.23
SF3A2-204ENST00000589118 MKNK1Q9BUB5 465 aa16.51■□□□□ 0.23
SF3A2-204ENST00000589118 SMG9Q9H0W8 520 aaKnown RBP16.51■□□□□ 0.23
SF3A2-204ENST00000589118 BRMS1Q9HCU9 246 aa16.51■□□□□ 0.23
SF3A2-204ENST00000589118 SPAG17Q6Q759 2223 aa16.51■□□□□ 0.23
SF3A2-204ENST00000589118 SFI1A8K8P3 1242 aa16.5■□□□□ 0.23
SF3A2-204ENST00000589118 ABLIM1O14639 778 aa16.5■□□□□ 0.23
SF3A2-204ENST00000589118 CHADO15335 359 aa16.5■□□□□ 0.23
SF3A2-204ENST00000589118 RPA1P27694 616 aa16.5■□□□□ 0.23
SF3A2-204ENST00000589118 CTHP32929 405 aa16.5■□□□□ 0.23
SF3A2-204ENST00000589118 NPTX2P47972 431 aa16.5■□□□□ 0.23
SF3A2-204ENST00000589118 EFNA5P52803 228 aa16.5■□□□□ 0.23
SF3A2-204ENST00000589118 LRRC32Q14392 662 aa16.5■□□□□ 0.23
SF3A2-204ENST00000589118 PPP2R5AQ15172 486 aa16.5■□□□□ 0.23
SF3A2-204ENST00000589118 TCEAL6Q6IPX3 200 aa16.5■□□□□ 0.23
SF3A2-204ENST00000589118 ZNF280DQ6N043 979 aa16.5■□□□□ 0.23
SF3A2-204ENST00000589118 DAW1Q8N136 415 aa16.5■□□□□ 0.23
SF3A2-204ENST00000589118 NSUN7Q8NE18 718 aaKnown RBP16.5■□□□□ 0.23
SF3A2-204ENST00000589118 WASF1Q92558 559 aa16.5■□□□□ 0.23
SF3A2-204ENST00000589118 TCEAL3Q969E4 200 aa16.5■□□□□ 0.23
SF3A2-204ENST00000589118 ACAP3Q96P50 834 aa16.5■□□□□ 0.23
SF3A2-204ENST00000589118 TMEM209Q96SK2 561 aa16.5■□□□□ 0.23
SF3A2-204ENST00000589118 TCHPQ9BT92 498 aa16.5■□□□□ 0.23
SF3A2-204ENST00000589118 NUP210Q8TEM1 1887 aaPredicted RBP16.5■□□□□ 0.23
SF3A2-204ENST00000589118 MYBPHLA2RUH7 354 aa16.49■□□□□ 0.23
SF3A2-204ENST00000589118 E9PMD0 336 aa16.49■□□□□ 0.23
SF3A2-204ENST00000589118 KCNE1P15382 129 aa16.49■□□□□ 0.23
SF3A2-204ENST00000589118 CNR2P34972 360 aa16.49■□□□□ 0.23
SF3A2-204ENST00000589118 CCT6AP40227 531 aaKnown RBP16.49■□□□□ 0.23
SF3A2-204ENST00000589118 GUCY2FP51841 1108 aa16.49■□□□□ 0.23
SF3A2-204ENST00000589118 FCHO2Q0JRZ9 810 aa16.49■□□□□ 0.23
SF3A2-204ENST00000589118 NBR1Q14596 966 aa16.49■□□□□ 0.23
SF3A2-204ENST00000589118 SLC10A6Q3KNW5 377 aa16.49■□□□□ 0.23
SF3A2-204ENST00000589118 STPG1Q5TH74 334 aa16.49■□□□□ 0.23
SF3A2-204ENST00000589118 GAREM2Q75VX8 874 aa16.49■□□□□ 0.23
SF3A2-204ENST00000589118 WDR5BQ86VZ2 330 aa16.49■□□□□ 0.23
SF3A2-204ENST00000589118 C12orf50Q8NA57 414 aaPredicted RBP16.49■□□□□ 0.23
SF3A2-204ENST00000589118 TOPORSQ9NS56 1045 aaPredicted RBP16.49■□□□□ 0.23
SF3A2-204ENST00000589118 SLC38A7Q9NVC3 462 aa16.49■□□□□ 0.23
SF3A2-204ENST00000589118 CNTN3Q9P232 1028 aa16.49■□□□□ 0.23
SF3A2-204ENST00000589118 KIAA1024Q9UPX6 916 aa16.49■□□□□ 0.23
SF3A2-204ENST00000589118 FRYQ5TBA9 3013 aa16.49■□□□□ 0.23
SF3A2-204ENST00000589118 C1QTNF9BB2RNN3 333 aa16.48■□□□□ 0.23
SF3A2-204ENST00000589118 GIPC1O14908 333 aa16.48■□□□□ 0.23
SF3A2-204ENST00000589118 PAPSS2O95340 614 aaPredicted RBP16.48■□□□□ 0.23
SF3A2-204ENST00000589118 PRAMEF12O95522 483 aa16.48■□□□□ 0.23
SF3A2-204ENST00000589118 C1QTNF9P0C862 333 aa16.48■□□□□ 0.23
SF3A2-204ENST00000589118 SPINK2P20155 84 aa16.48■□□□□ 0.23
SF3A2-204ENST00000589118 MARCKSP29966 332 aaPredicted RBP16.48■□□□□ 0.23
SF3A2-204ENST00000589118 RPL9P32969 192 aaKnown RBP16.48■□□□□ 0.23
SF3A2-204ENST00000589118 CYP4F8P98187 520 aa16.48■□□□□ 0.23
SF3A2-204ENST00000589118 CACNB1Q02641 598 aaPredicted RBP16.48■□□□□ 0.23
SF3A2-204ENST00000589118 CCINQ13939 588 aa16.48■□□□□ 0.23
SF3A2-204ENST00000589118 DGKKQ5KSL6 1271 aa16.48■□□□□ 0.23
SF3A2-204ENST00000589118 ATAD1Q8NBU5 361 aa16.48■□□□□ 0.23
SF3A2-204ENST00000589118 ATXN3LQ9H3M9 355 aa16.48■□□□□ 0.23
SF3A2-204ENST00000589118 C8orf33Q9H7E9 229 aaPredicted RBP16.48■□□□□ 0.23
SF3A2-204ENST00000589118 PCDHB8Q9UN66 801 aa16.48■□□□□ 0.23
SF3A2-204ENST00000589118 PPEF2O14830 753 aa16.47■□□□□ 0.23
SF3A2-204ENST00000589118 SLC16A4O15374 487 aa16.47■□□□□ 0.23
SF3A2-204ENST00000589118 HIP1RO75146 1068 aa16.47■□□□□ 0.23
SF3A2-204ENST00000589118 KCNK5O95279 499 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms