RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 SPTLC1O15269 473 aa18.96■□□□□ 0.63
DNMT1-215ENST00000588913 CLASP2O75122 1294 aaKnown RBP18.96■□□□□ 0.63
DNMT1-215ENST00000588913 SERPINC1P01008 464 aa18.96■□□□□ 0.63
DNMT1-215ENST00000588913 CNPP09543 421 aaKnown RBP18.96■□□□□ 0.63
DNMT1-215ENST00000588913 CD44P16070 742 aaKnown RBP18.96■□□□□ 0.63
DNMT1-215ENST00000588913 CA8P35219 290 aa18.96■□□□□ 0.63
DNMT1-215ENST00000588913 CASP4P49662 377 aa18.96■□□□□ 0.63
DNMT1-215ENST00000588913 KYAT1Q16773 422 aa18.96■□□□□ 0.63
DNMT1-215ENST00000588913 DCLRE1AQ6PJP8 1040 aa18.96■□□□□ 0.63
DNMT1-215ENST00000588913 CXorf38Q8TB03 319 aa18.96■□□□□ 0.63
DNMT1-215ENST00000588913 UBE2ZQ9H832 354 aaPredicted RBP18.96■□□□□ 0.63
DNMT1-215ENST00000588913 SLC38A7Q9NVC3 462 aa18.96■□□□□ 0.63
DNMT1-215ENST00000588913 ARGLU1Q9NWB6 273 aaPredicted RBP18.96■□□□□ 0.63
DNMT1-215ENST00000588913 TRMT1Q9NXH9 659 aaKnown RBP18.96■□□□□ 0.63
DNMT1-215ENST00000588913 CLDND1Q9NY35 253 aa18.96■□□□□ 0.63
DNMT1-215ENST00000588913 CLEC1BQ9P126 229 aa18.96■□□□□ 0.63
DNMT1-215ENST00000588913 H3BQ06 376 aaPredicted RBP18.96■□□□□ 0.63
DNMT1-215ENST00000588913 ADAM12O43184 909 aa18.96■□□□□ 0.63
DNMT1-215ENST00000588913 TKTP29401 623 aaKnown RBP18.96■□□□□ 0.63
DNMT1-215ENST00000588913 LRPAP1P30533 357 aa18.96■□□□□ 0.63
DNMT1-215ENST00000588913 PRCPP42785 496 aa18.96■□□□□ 0.63
DNMT1-215ENST00000588913 ETF1P62495 437 aaKnown RBP18.96■□□□□ 0.63
DNMT1-215ENST00000588913 DSG1Q02413 1049 aa18.96■□□□□ 0.63
DNMT1-215ENST00000588913 ADAM15Q13444 863 aa18.96■□□□□ 0.63
DNMT1-215ENST00000588913 TMEM132DQ14C87 1099 aa18.96■□□□□ 0.63
DNMT1-215ENST00000588913 ZCWPW2Q504Y3 356 aa18.96■□□□□ 0.63
DNMT1-215ENST00000588913 FAM171A1Q5VUB5 890 aa18.96■□□□□ 0.63
DNMT1-215ENST00000588913 RSPO2Q6UXX9 243 aaPredicted RBP18.96■□□□□ 0.63
DNMT1-215ENST00000588913 C12orf56Q8IXR9 622 aa18.96■□□□□ 0.63
DNMT1-215ENST00000588913 MLKLQ8NB16 471 aa18.96■□□□□ 0.63
DNMT1-215ENST00000588913 OR5B17Q8NGF7 314 aa18.96■□□□□ 0.63
DNMT1-215ENST00000588913 BARX2Q9UMQ3 279 aaPredicted RBP18.96■□□□□ 0.63
DNMT1-215ENST00000588913 UBQLN1Q9UMX0 589 aaKnown RBP18.96■□□□□ 0.63
DNMT1-215ENST00000588913 IRAK3Q9Y616 596 aa18.96■□□□□ 0.63
DNMT1-215ENST00000588913 TULP1O00294 542 aaPredicted RBP18.95■□□□□ 0.62
DNMT1-215ENST00000588913 ARHGAP6O43182 974 aa18.95■□□□□ 0.62
DNMT1-215ENST00000588913 KCNQ1P51787 676 aa18.95■□□□□ 0.62
DNMT1-215ENST00000588913 PMS1P54277 932 aaKnown RBP18.95■□□□□ 0.62
DNMT1-215ENST00000588913 BMS1Q14692 1282 aaKnown RBP18.95■□□□□ 0.62
DNMT1-215ENST00000588913 LLGL2Q6P1M3 1020 aa18.95■□□□□ 0.62
DNMT1-215ENST00000588913 VSTM4Q8IW00 320 aa18.95■□□□□ 0.62
DNMT1-215ENST00000588913 GUF1Q8N442 669 aaKnown RBP18.95■□□□□ 0.62
DNMT1-215ENST00000588913 SMARCE1Q969G3 411 aa18.95■□□□□ 0.62
DNMT1-215ENST00000588913 PABPC5Q96DU9 382 aaKnown RBP18.95■□□□□ 0.62
DNMT1-215ENST00000588913 UROC1Q96N76 676 aa18.95■□□□□ 0.62
DNMT1-215ENST00000588913 KLHL5Q96PQ7 755 aa18.95■□□□□ 0.62
DNMT1-215ENST00000588913 POP1Q99575 1024 aaKnown RBP18.95■□□□□ 0.62
DNMT1-215ENST00000588913 ASB7Q9H672 318 aa18.95■□□□□ 0.62
DNMT1-215ENST00000588913 CDH22Q9UJ99 828 aa18.95■□□□□ 0.62
DNMT1-215ENST00000588913 TCF20Q9UGU0 1960 aaKnown RBP18.94■□□□□ 0.62
DNMT1-215ENST00000588913 SPDYE4A6NLX3 237 aa18.94■□□□□ 0.62
DNMT1-215ENST00000588913 BIN1O00499 593 aa18.94■□□□□ 0.62
DNMT1-215ENST00000588913 EPCAMP16422 314 aa18.94■□□□□ 0.62
DNMT1-215ENST00000588913 KCNA5P22460 613 aa18.94■□□□□ 0.62
DNMT1-215ENST00000588913 GLUD2P49448 558 aa18.94■□□□□ 0.62
DNMT1-215ENST00000588913 CLUL1Q15846 466 aa18.94■□□□□ 0.62
DNMT1-215ENST00000588913 SNRNP35Q16560 246 aaKnown RBP18.94■□□□□ 0.62
DNMT1-215ENST00000588913 EFHBQ8N7U6 833 aa18.94■□□□□ 0.62
DNMT1-215ENST00000588913 RIN2Q8WYP3 895 aaPredicted RBP18.94■□□□□ 0.62
DNMT1-215ENST00000588913 GSDMAQ96QA5 445 aa18.94■□□□□ 0.62
DNMT1-215ENST00000588913 FAM53CQ9NYF3 392 aa18.94■□□□□ 0.62
DNMT1-215ENST00000588913 C2CD2Q9Y426 696 aa18.94■□□□□ 0.62
DNMT1-215ENST00000588913 SF3B1O75533 1304 aaKnown RBP eCLIP18.94■□□□□ 0.628e-6■■■■■ 107
DNMT1-215ENST00000588913 ANO9A1A5B4 782 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 PIRO00625 290 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 TEX28O15482 410 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 LDHAP00338 332 aaKnown RBP18.93■□□□□ 0.62
DNMT1-215ENST00000588913 CYP3A5P20815 502 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 FGFR3P22607 806 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 RPL9P32969 192 aaKnown RBP18.93■□□□□ 0.62
DNMT1-215ENST00000588913 ZNF658Q5TYW1 1059 aaPredicted RBP18.93■□□□□ 0.62
DNMT1-215ENST00000588913 C9orf57Q5W0N0 161 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 PDE12Q6L8Q7 609 aaKnown RBP18.93■□□□□ 0.62
DNMT1-215ENST00000588913 EP400NLQ6ZTU2 488 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 HS2ST1Q7LGA3 356 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 GLYCTKQ8IVS8 523 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.93■□□□□ 0.62
DNMT1-215ENST00000588913 CD302Q8IX05 232 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 C1orf127Q8N9H9 656 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 XXYLT1Q8NBI6 393 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 LNX1Q8TBB1 728 aaPredicted RBP18.93■□□□□ 0.62
DNMT1-215ENST00000588913 SLC22A17Q8WUG5 538 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 HLA-CQ95604 372 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 EEF2KMTQ96G04 330 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 HCFC2Q9Y5Z7 792 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 PDXKO00764 312 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 ATP8B1O43520 1251 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 IL18RAPO95256 599 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 NR3C1P04150 777 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 URODP06132 367 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 TFAMQ00059 246 aaKnown RBP18.93■□□□□ 0.62
DNMT1-215ENST00000588913 POU5F1Q01860 360 aaKnown RBP18.93■□□□□ 0.62
DNMT1-215ENST00000588913 CYP24A1Q07973 514 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 USP41Q3LFD5 358 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 CEP57Q86XR8 500 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 ZNF516Q92618 1163 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 DDX27Q96GQ7 796 aaKnown RBP18.93■□□□□ 0.62
DNMT1-215ENST00000588913 MTMR12Q9C0I1 747 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 RXFP1Q9HBX9 757 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 DPP3Q9NY33 737 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms