RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 MS4A14Q96JA4 679 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 ADPGKQ9BRR6 497 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 KATNAL1Q9BW62 490 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 GCOM2Q9BZD3 368 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-206ENST00000588860 ARHGAP39Q9C0H5 1083 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 NIF3L1Q9GZT8 377 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 PDCL3Q9H2J4 239 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 ADAMTS10Q9H324 1103 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 ANKZF1Q9H8Y5 726 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 CTTNBP2NLQ9P2B4 639 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 AMFRQ9UKV5 643 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 GINS2Q9Y248 185 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 Q9Y3F1 56 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 PCDHB2Q9Y5E7 798 aa9.38□□□□□ -0.91
SMAD4-206ENST00000588860 SMIM35A0A1B0GVV1 85 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 MBLAC1A4D2B0 266 aaPredicted RBP9.37□□□□□ -0.91
SMAD4-206ENST00000588860 HAS3O00219 553 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 THAP12O43422 761 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 NPTXRO95502 500 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 CST3P01034 146 aaPredicted RBP9.37□□□□□ -0.91
SMAD4-206ENST00000588860 IGHA2P01877 340 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 CYP1A2P05177 515 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 KRT19P08727 400 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 AKR1A1P14550 325 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 GNA15P30679 374 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 PSMC4P43686 418 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 SGSM1Q2NKQ1 1148 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 DCAF4L1Q3SXM0 396 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 CFAP221Q4G0U5 840 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 MFSD14CQ5VZR4 134 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 JADE1Q6IE81 842 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 CCDC70Q6NSX1 233 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 TMEM270Q6UE05 265 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 TMCO3Q6UWJ1 677 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 CATSPER4Q7RTX7 472 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 NT5DC3Q86UY8 548 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 ZNF677Q86XU0 584 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 UBR7Q8N806 425 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 PBKQ96KB5 322 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 CALR3Q96L12 384 aaKnown RBP9.37□□□□□ -0.91
SMAD4-206ENST00000588860 PNKPQ96T60 521 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 OSMRQ99650 979 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 SELENOOQ9BVL4 669 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 GABRQQ9UN88 632 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 COG5Q9UP83 839 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 STXBP5LQ9Y2K9 1186 aa9.37□□□□□ -0.91
SMAD4-206ENST00000588860 MROH7Q68CQ1 1323 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 A0A1B0GUA9 196 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 C17orf102A2RUQ5 167 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 MYADML2A6NDP7 307 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 CES2O00748 559 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 MEFVO15553 781 aaPredicted RBP9.36□□□□□ -0.91
SMAD4-206ENST00000588860 RRP9O43818 475 aaKnown RBP9.36□□□□□ -0.91
SMAD4-206ENST00000588860 CEP104O60308 925 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 GPR32O75388 356 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 ALDH1A1P00352 501 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 CD58P19256 250 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 SSTR3P32745 418 aaPredicted RBP9.36□□□□□ -0.91
SMAD4-206ENST00000588860 HADHBP55084 474 aaKnown RBP9.36□□□□□ -0.91
SMAD4-206ENST00000588860 YWHAEP62258 255 aaKnown RBP9.36□□□□□ -0.91
SMAD4-206ENST00000588860 ZNF200P98182 395 aaPredicted RBP9.36□□□□□ -0.91
SMAD4-206ENST00000588860 CDC42EP1Q00587 391 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 POU5F1Q01860 360 aaKnown RBP9.36□□□□□ -0.91
SMAD4-206ENST00000588860 HIC1Q14526 733 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 TMEM132DQ14C87 1099 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 BRD3Q15059 726 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 TCEAL1Q15170 157 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 NAA35Q5VZE5 725 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 C11orf63Q6NUN7 778 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 TRIM72Q6ZMU5 477 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 PASD1Q8IV76 773 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 MMGT1Q8N4V1 131 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 SPATA4Q8NEY3 305 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 ZNF296Q8WUU4 475 aaPredicted RBP9.36□□□□□ -0.91
SMAD4-206ENST00000588860 DNAJB3Q8WWF6 145 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 ACAP3Q96P50 834 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 NUP85Q9BW27 656 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 CCDC94Q9BW85 323 aaPredicted RBP9.36□□□□□ -0.91
SMAD4-206ENST00000588860 ZNF446Q9NWS9 450 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 RNF14Q9UBS8 474 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 NXF1Q9UBU9 619 aaKnown RBP9.36□□□□□ -0.91
SMAD4-206ENST00000588860 CNOT8Q9UFF9 292 aaKnown RBP9.36□□□□□ -0.91
SMAD4-206ENST00000588860 SIX4Q9UIU6 781 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 RAB21Q9UL25 225 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 POLIQ9UNA4 740 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 CNTN6Q9UQ52 1028 aa9.36□□□□□ -0.91
SMAD4-206ENST00000588860 TDRD15B5MCY1 1934 aaKnown RBP9.35□□□□□ -0.91
SMAD4-206ENST00000588860 MKI67P46013 3256 aaKnown RBP9.35□□□□□ -0.91
SMAD4-206ENST00000588860 TARSL2A2RTX5 802 aaKnown RBP9.35□□□□□ -0.91
SMAD4-206ENST00000588860 TK2O00142 265 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 CEP290O15078 2479 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 TREHO43280 583 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 KPNA6O60684 536 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 DUSP11O75319 330 aaKnown RBP9.35□□□□□ -0.91
SMAD4-206ENST00000588860 ERLIN1O75477 346 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 MTA2O94776 668 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 SEC31AO94979 1220 aaKnown RBP9.35□□□□□ -0.91
SMAD4-206ENST00000588860 ITGB3P05106 788 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 C6orf222P0C671 652 aaPredicted RBP9.35□□□□□ -0.91
SMAD4-206ENST00000588860 GNAT1P11488 350 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms