RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 MFAP3P55082 362 aa24.29■■□□□ 1.48
ACTN4-210ENST00000588618 TNNC1P63316 161 aa24.29■■□□□ 1.48
ACTN4-210ENST00000588618 SV2CQ496J9 727 aa24.29■■□□□ 1.48
ACTN4-210ENST00000588618 ZNF280BQ86YH2 543 aa24.29■■□□□ 1.48
ACTN4-210ENST00000588618 ARID3AQ99856 593 aa24.29■■□□□ 1.48
ACTN4-210ENST00000588618 FBXL5Q9UKA1 691 aa24.29■■□□□ 1.48
ACTN4-210ENST00000588618 A0A1W2PQJ5 194 aa24.28■■□□□ 1.48
ACTN4-210ENST00000588618 PTMAP06454 111 aaKnown RBP24.28■■□□□ 1.48
ACTN4-210ENST00000588618 DEKP35659 375 aaKnown RBP24.28■■□□□ 1.48
ACTN4-210ENST00000588618 OR1G1P47890 313 aa24.28■■□□□ 1.48
ACTN4-210ENST00000588618 UPP1Q16831 310 aa24.28■■□□□ 1.48
ACTN4-210ENST00000588618 SPOUT1Q5T280 376 aaKnown RBP24.28■■□□□ 1.48
ACTN4-210ENST00000588618 E4F1Q66K89 784 aaPredicted RBP24.28■■□□□ 1.48
ACTN4-210ENST00000588618 RABGGTAQ92696 567 aa24.28■■□□□ 1.48
ACTN4-210ENST00000588618 GPR88Q9GZN0 384 aa24.28■■□□□ 1.48
ACTN4-210ENST00000588618 NIF3L1Q9GZT8 377 aa24.28■■□□□ 1.48
ACTN4-210ENST00000588618 VRTNQ9H8Y1 702 aa24.28■■□□□ 1.48
ACTN4-210ENST00000588618 HCSTQ9UBK5 93 aa24.28■■□□□ 1.48
ACTN4-210ENST00000588618 DNAJC12Q9UKB3 198 aa24.28■■□□□ 1.48
ACTN4-210ENST00000588618 LUC7L2Q9Y383 392 aaKnown RBP24.28■■□□□ 1.48
ACTN4-210ENST00000588618 LAMA3Q16787 3333 aa24.28■■□□□ 1.48
ACTN4-210ENST00000588618 B3GAT3O94766 335 aa24.27■■□□□ 1.48
ACTN4-210ENST00000588618 DDHD2O94830 711 aa24.27■■□□□ 1.48
ACTN4-210ENST00000588618 STAU1O95793 577 aaKnown RBP24.27■■□□□ 1.48
ACTN4-210ENST00000588618 ATP2A2P16615 1042 aaKnown RBP24.27■■□□□ 1.48
ACTN4-210ENST00000588618 DSC1Q08554 894 aa24.27■■□□□ 1.48
ACTN4-210ENST00000588618 BTG3Q14201 252 aaPredicted RBP24.27■■□□□ 1.48
ACTN4-210ENST00000588618 ENOSF1Q7L5Y1 443 aa24.27■■□□□ 1.48
ACTN4-210ENST00000588618 PHOSPHO2Q8TCD6 241 aa24.27■■□□□ 1.48
ACTN4-210ENST00000588618 EDEM3Q9BZQ6 932 aa24.27■■□□□ 1.48
ACTN4-210ENST00000588618 GJB5O95377 273 aa24.27■■□□□ 1.48
ACTN4-210ENST00000588618 PNMA6AP0CW24 399 aaPredicted RBP24.27■■□□□ 1.48
ACTN4-210ENST00000588618 KRT9P35527 623 aa24.27■■□□□ 1.48
ACTN4-210ENST00000588618 JAM2P57087 298 aa24.27■■□□□ 1.48
ACTN4-210ENST00000588618 GCNT1Q02742 428 aa24.27■■□□□ 1.48
ACTN4-210ENST00000588618 ARHGAP44Q17R89 818 aa24.27■■□□□ 1.48
ACTN4-210ENST00000588618 GPIHBP1Q8IV16 184 aa24.27■■□□□ 1.48
ACTN4-210ENST00000588618 CNGA4Q8IV77 575 aa24.27■■□□□ 1.48
ACTN4-210ENST00000588618 COLGALT2Q8IYK4 626 aa24.27■■□□□ 1.48
ACTN4-210ENST00000588618 C3orf58Q8NDZ4 430 aa24.27■■□□□ 1.48
ACTN4-210ENST00000588618 MMS19Q96T76 1030 aa24.27■■□□□ 1.48
ACTN4-210ENST00000588618 POLIQ9UNA4 740 aa24.27■■□□□ 1.48
ACTN4-210ENST00000588618 SNX9Q9Y5X1 595 aa24.27■■□□□ 1.48
ACTN4-210ENST00000588618 KPNA7A9QM74 516 aa24.26■■□□□ 1.47
ACTN4-210ENST00000588618 AKR1B15C9JRZ8 316 aaPredicted RBP24.26■■□□□ 1.47
ACTN4-210ENST00000588618 SPTLC1O15269 473 aa24.26■■□□□ 1.47
ACTN4-210ENST00000588618 ALDH2P05091 517 aa24.26■■□□□ 1.47
ACTN4-210ENST00000588618 LILRA4P59901 499 aa24.26■■□□□ 1.47
ACTN4-210ENST00000588618 CUL2Q13617 745 aa24.26■■□□□ 1.47
ACTN4-210ENST00000588618 TSR1Q2NL82 804 aaKnown RBP24.26■■□□□ 1.47
ACTN4-210ENST00000588618 DCLRE1AQ6PJP8 1040 aa24.26■■□□□ 1.47
ACTN4-210ENST00000588618 CMTR2Q8IYT2 770 aaKnown RBP24.26■■□□□ 1.47
ACTN4-210ENST00000588618 ZNF689Q96CS4 500 aaPredicted RBP24.26■■□□□ 1.47
ACTN4-210ENST00000588618 FAXDC2Q96IV6 333 aa24.26■■□□□ 1.47
ACTN4-210ENST00000588618 RNPC3Q96LT9 517 aaKnown RBP24.26■■□□□ 1.47
ACTN4-210ENST00000588618 NRDE2Q9H7Z3 1164 aa24.26■■□□□ 1.47
ACTN4-210ENST00000588618 LRRC53A6NM62 1247 aa24.25■■□□□ 1.47
ACTN4-210ENST00000588618 GSDMDP57764 484 aa24.25■■□□□ 1.47
ACTN4-210ENST00000588618 ZBED6P86452 979 aa24.25■■□□□ 1.47
ACTN4-210ENST00000588618 SCARA5Q6ZMJ2 495 aa24.25■■□□□ 1.47
ACTN4-210ENST00000588618 UBE2OQ9C0C9 1292 aaKnown RBP24.25■■□□□ 1.47
ACTN4-210ENST00000588618 DNAJB4Q9UDY4 337 aa24.25■■□□□ 1.47
ACTN4-210ENST00000588618 PRG3Q9Y2Y8 225 aaPredicted RBP24.25■■□□□ 1.47
ACTN4-210ENST00000588618 INSL6Q9Y581 213 aa24.25■■□□□ 1.47
ACTN4-210ENST00000588618 PAX3P23760 479 aa24.24■■□□□ 1.47
ACTN4-210ENST00000588618 ASPAP45381 313 aa24.24■■□□□ 1.47
ACTN4-210ENST00000588618 ALDH7A1P49419 539 aaKnown RBP24.24■■□□□ 1.47
ACTN4-210ENST00000588618 YWHAEP62258 255 aaKnown RBP24.24■■□□□ 1.47
ACTN4-210ENST00000588618 PDXDC1Q6P996 788 aa24.24■■□□□ 1.47
ACTN4-210ENST00000588618 HERC6Q8IVU3 1022 aa24.24■■□□□ 1.47
ACTN4-210ENST00000588618 TMEM175Q9BSA9 504 aa24.24■■□□□ 1.47
ACTN4-210ENST00000588618 STK33Q9BYT3 514 aa24.24■■□□□ 1.47
ACTN4-210ENST00000588618 NUCKS1Q9H1E3 243 aaKnown RBP24.24■■□□□ 1.47
ACTN4-210ENST00000588618 RC3H2Q9HBD1 1191 aaKnown RBP24.24■■□□□ 1.47
ACTN4-210ENST00000588618 ABHD10Q9NUJ1 306 aa24.24■■□□□ 1.47
ACTN4-210ENST00000588618 FAN1Q9Y2M0 1017 aa24.24■■□□□ 1.47
ACTN4-210ENST00000588618 F8W810 466 aa24.24■■□□□ 1.47
ACTN4-210ENST00000588618 DRAP1Q14919 205 aaPredicted RBP24.24■■□□□ 1.47
ACTN4-210ENST00000588618 DSTYKQ6XUX3 929 aa24.24■■□□□ 1.47
ACTN4-210ENST00000588618 FMNL3Q8IVF7 1028 aa24.24■■□□□ 1.47
ACTN4-210ENST00000588618 DNAJC7Q99615 494 aa24.24■■□□□ 1.47
ACTN4-210ENST00000588618 COLEC11Q9BWP8 271 aa24.24■■□□□ 1.47
ACTN4-210ENST00000588618 F8VZ95 297 aa24.23■■□□□ 1.47
ACTN4-210ENST00000588618 TLL1O43897 1013 aa24.23■■□□□ 1.47
ACTN4-210ENST00000588618 HUS1O60921 280 aa24.23■■□□□ 1.47
ACTN4-210ENST00000588618 CD300LGQ6UXG3 332 aa24.23■■□□□ 1.47
ACTN4-210ENST00000588618 HASPINQ8TF76 798 aa24.23■■□□□ 1.47
ACTN4-210ENST00000588618 JAKMIP2Q96AA8 810 aa24.23■■□□□ 1.47
ACTN4-210ENST00000588618 SDCBP2Q9H190 292 aa24.23■■□□□ 1.47
ACTN4-210ENST00000588618 CARNS1A5YM72 827 aa24.22■■□□□ 1.47
ACTN4-210ENST00000588618 H0YGN5 161 aa24.22■■□□□ 1.47
ACTN4-210ENST00000588618 TADA2AO75478 443 aa24.22■■□□□ 1.47
ACTN4-210ENST00000588618 USP8P40818 1118 aa24.22■■□□□ 1.47
ACTN4-210ENST00000588618 C9orf50Q5SZB4 431 aa24.22■■□□□ 1.47
ACTN4-210ENST00000588618 WDR59Q6PJI9 974 aa24.22■■□□□ 1.47
ACTN4-210ENST00000588618 UBR7Q8N806 425 aa24.22■■□□□ 1.47
ACTN4-210ENST00000588618 SHC3Q92529 594 aa24.22■■□□□ 1.47
ACTN4-210ENST00000588618 RAD9AQ99638 391 aa24.22■■□□□ 1.47
ACTN4-210ENST00000588618 ZNHIT6Q9NWK9 470 aaKnown RBP24.22■■□□□ 1.47
ACTN4-210ENST00000588618 GDAP2Q9NXN4 497 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms