RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 ADAM12O43184 909 aa21.81■■□□□ 1.08
DDX39A-207ENST00000588542 TNNI1P19237 187 aa21.81■■□□□ 1.08
DDX39A-207ENST00000588542 CCNE1P24864 410 aa21.81■■□□□ 1.08
DDX39A-207ENST00000588542 CLDN10P78369 228 aa21.81■■□□□ 1.08
DDX39A-207ENST00000588542 CREMQ03060 361 aa21.81■■□□□ 1.08
DDX39A-207ENST00000588542 VARS2Q5ST30 1063 aaKnown RBP21.81■■□□□ 1.08
DDX39A-207ENST00000588542 PDXDC1Q6P996 788 aa21.81■■□□□ 1.08
DDX39A-207ENST00000588542 RSPO2Q6UXX9 243 aaPredicted RBP21.81■■□□□ 1.08
DDX39A-207ENST00000588542 PPFIBP1Q86W92 1011 aa21.81■■□□□ 1.08
DDX39A-207ENST00000588542 GLYCTKQ8IVS8 523 aa21.81■■□□□ 1.08
DDX39A-207ENST00000588542 ZC3H3Q8IXZ2 948 aaKnown RBP21.81■■□□□ 1.08
DDX39A-207ENST00000588542 CSGALNACT2Q8N6G5 542 aa21.81■■□□□ 1.08
DDX39A-207ENST00000588542 ATXN2LQ8WWM7 1075 aaKnown RBP21.81■■□□□ 1.08
DDX39A-207ENST00000588542 DHTKD1Q96HY7 919 aaPredicted RBP21.81■■□□□ 1.08
DDX39A-207ENST00000588542 SENP8Q96LD8 212 aa21.81■■□□□ 1.08
DDX39A-207ENST00000588542 NUP62CLQ9H1M0 184 aa21.81■■□□□ 1.08
DDX39A-207ENST00000588542 FRMD4BQ9Y2L6 1034 aa21.81■■□□□ 1.08
DDX39A-207ENST00000588542 A0A0C4DFX4 3053 aa21.8■■□□□ 1.08
DDX39A-207ENST00000588542 TBC1D4O60343 1298 aa21.8■■□□□ 1.08
DDX39A-207ENST00000588542 TNNC2P02585 160 aa21.8■■□□□ 1.08
DDX39A-207ENST00000588542 ADH1AP07327 375 aa21.8■■□□□ 1.08
DDX39A-207ENST00000588542 PAX3P23760 479 aa21.8■■□□□ 1.08
DDX39A-207ENST00000588542 RPL13P26373 211 aaKnown RBP21.8■■□□□ 1.08
DDX39A-207ENST00000588542 PPP1R2P41236 205 aa21.8■■□□□ 1.08
DDX39A-207ENST00000588542 TAF6P49848 677 aa21.8■■□□□ 1.08
DDX39A-207ENST00000588542 DLG4P78352 724 aa21.8■■□□□ 1.08
DDX39A-207ENST00000588542 STIM1Q13586 685 aa21.8■■□□□ 1.08
DDX39A-207ENST00000588542 LEXMQ3ZCV2 418 aa21.8■■□□□ 1.08
DDX39A-207ENST00000588542 DSTYKQ6XUX3 929 aa21.8■■□□□ 1.08
DDX39A-207ENST00000588542 ANKS3Q6ZW76 656 aa21.8■■□□□ 1.08
DDX39A-207ENST00000588542 TRAPPC11Q7Z392 1133 aa21.8■■□□□ 1.08
DDX39A-207ENST00000588542 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.8■■□□□ 1.08
DDX39A-207ENST00000588542 EEF2KMTQ96G04 330 aa21.8■■□□□ 1.08
DDX39A-207ENST00000588542 TIMM13Q9Y5L4 95 aaPredicted RBP21.8■■□□□ 1.08
DDX39A-207ENST00000588542 BACE2Q9Y5Z0 518 aa21.8■■□□□ 1.08
DDX39A-207ENST00000588542 C2orf16Q68DN1 1984 aa21.79■■□□□ 1.08
DDX39A-207ENST00000588542 VCANP13611 3396 aa21.79■■□□□ 1.08
DDX39A-207ENST00000588542 PSMA7O14818 248 aa21.79■■□□□ 1.08
DDX39A-207ENST00000588542 MRPS5P82675 430 aaKnown RBP21.79■■□□□ 1.08
DDX39A-207ENST00000588542 LRRC63Q05C16 580 aa21.79■■□□□ 1.08
DDX39A-207ENST00000588542 C1orf220Q5T0J3 134 aa21.79■■□□□ 1.08
DDX39A-207ENST00000588542 ANKRD54Q6NXT1 300 aa21.79■■□□□ 1.08
DDX39A-207ENST00000588542 LILRA6Q6PI73 481 aa21.79■■□□□ 1.08
DDX39A-207ENST00000588542 PALB2Q86YC2 1186 aa21.79■■□□□ 1.08
DDX39A-207ENST00000588542 FAM186BQ8IYM0 893 aa21.79■■□□□ 1.08
DDX39A-207ENST00000588542 LRRC52Q8N7C0 313 aa21.79■■□□□ 1.08
DDX39A-207ENST00000588542 APPL2Q8NEU8 664 aa21.79■■□□□ 1.08
DDX39A-207ENST00000588542 TMC2Q8TDI7 906 aa21.79■■□□□ 1.08
DDX39A-207ENST00000588542 CASP10Q92851 521 aa21.79■■□□□ 1.08
DDX39A-207ENST00000588542 ZNF560Q96MR9 790 aa21.79■■□□□ 1.08
DDX39A-207ENST00000588542 TSG101Q99816 390 aa21.79■■□□□ 1.08
DDX39A-207ENST00000588542 TGM5O43548 720 aa21.78■■□□□ 1.08
DDX39A-207ENST00000588542 C1RP00736 705 aa21.78■■□□□ 1.08
DDX39A-207ENST00000588542 CST3P01034 146 aaPredicted RBP21.78■■□□□ 1.08
DDX39A-207ENST00000588542 KRT19P08727 400 aa21.78■■□□□ 1.08
DDX39A-207ENST00000588542 PSMC2P35998 433 aaKnown RBP21.78■■□□□ 1.08
DDX39A-207ENST00000588542 PNPLA4P41247 253 aa21.78■■□□□ 1.08
DDX39A-207ENST00000588542 KCNQ1P51787 676 aa21.78■■□□□ 1.08
DDX39A-207ENST00000588542 MCCD1P59942 119 aaPredicted RBP21.78■■□□□ 1.08
DDX39A-207ENST00000588542 RBP5P82980 135 aa21.78■■□□□ 1.08
DDX39A-207ENST00000588542 CLUL1Q15846 466 aa21.78■■□□□ 1.08
DDX39A-207ENST00000588542 SV2CQ496J9 727 aa21.78■■□□□ 1.08
DDX39A-207ENST00000588542 KLHL10Q6JEL2 608 aa21.78■■□□□ 1.08
DDX39A-207ENST00000588542 SYCE2Q6PIF2 218 aa21.78■■□□□ 1.08
DDX39A-207ENST00000588542 ASB2Q96Q27 587 aa21.78■■□□□ 1.08
DDX39A-207ENST00000588542 DUSP9Q99956 384 aaKnown RBP21.78■■□□□ 1.08
DDX39A-207ENST00000588542 KPNA7A9QM74 516 aa21.77■■□□□ 1.08
DDX39A-207ENST00000588542 CETN3O15182 167 aa21.77■■□□□ 1.08
DDX39A-207ENST00000588542 OAZ2O95190 189 aa21.77■■□□□ 1.08
DDX39A-207ENST00000588542 GLUD1P00367 558 aa21.77■■□□□ 1.08
DDX39A-207ENST00000588542 CYP11A1P05108 521 aa21.77■■□□□ 1.08
DDX39A-207ENST00000588542 SRGAP2BP0DMP2 458 aa21.77■■□□□ 1.08
DDX39A-207ENST00000588542 ODC1P11926 461 aa21.77■■□□□ 1.08
DDX39A-207ENST00000588542 TYMPP19971 482 aa21.77■■□□□ 1.08
DDX39A-207ENST00000588542 OR1D2P34982 312 aa21.77■■□□□ 1.08
DDX39A-207ENST00000588542 FKBP3Q00688 224 aaKnown RBP21.77■■□□□ 1.08
DDX39A-207ENST00000588542 AAK1Q2M2I8 961 aa21.77■■□□□ 1.08
DDX39A-207ENST00000588542 TTI2Q6NXR4 508 aa21.77■■□□□ 1.08
DDX39A-207ENST00000588542 NELFBQ8WX92 580 aa21.77■■□□□ 1.08
DDX39A-207ENST00000588542 MKNK1Q9BUB5 465 aa21.77■■□□□ 1.08
DDX39A-207ENST00000588542 S1PR5Q9H228 398 aa21.77■■□□□ 1.08
DDX39A-207ENST00000588542 CD207Q9UJ71 328 aa21.77■■□□□ 1.08
DDX39A-207ENST00000588542 CTNND2Q9UQB3 1225 aa21.77■■□□□ 1.08
DDX39A-207ENST00000588542 CDY1Q9Y6F8 540 aa21.77■■□□□ 1.08
DDX39A-207ENST00000588542 H7C4K7 107 aa21.76■■□□□ 1.07
DDX39A-207ENST00000588542 CYB561D2O14569 222 aa21.76■■□□□ 1.07
DDX39A-207ENST00000588542 C4BPAP04003 597 aaKnown RBP21.76■■□□□ 1.07
DDX39A-207ENST00000588542 SPATA31D3P0C874 917 aa21.76■■□□□ 1.07
DDX39A-207ENST00000588542 VAMP7P51809 220 aa21.76■■□□□ 1.07
DDX39A-207ENST00000588542 YWHAHQ04917 246 aaPredicted RBP21.76■■□□□ 1.07
DDX39A-207ENST00000588542 ENPEPQ07075 957 aa21.76■■□□□ 1.07
DDX39A-207ENST00000588542 BFSP1Q12934 665 aa21.76■■□□□ 1.07
DDX39A-207ENST00000588542 RAB33AQ14088 237 aa21.76■■□□□ 1.07
DDX39A-207ENST00000588542 TDRD10Q5VZ19 366 aaKnown RBP21.76■■□□□ 1.07
DDX39A-207ENST00000588542 SLC8B1Q6J4K2 584 aa21.76■■□□□ 1.07
DDX39A-207ENST00000588542 FOXR2Q6PJQ5 311 aa21.76■■□□□ 1.07
DDX39A-207ENST00000588542 SPATA31D4Q6ZUB0 917 aa21.76■■□□□ 1.07
DDX39A-207ENST00000588542 INTS8Q75QN2 995 aaKnown RBP21.76■■□□□ 1.07
DDX39A-207ENST00000588542 SMRP1Q8NCR6 262 aa21.76■■□□□ 1.07
DDX39A-207ENST00000588542 MAN1C1Q9NR34 630 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms