RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 C9orf57Q5W0N0 161 aa16.04■□□□□ 0.16
NFIX-208ENST00000587260 FAM109BQ6ICB4 259 aaPredicted RBP16.04■□□□□ 0.16
NFIX-208ENST00000587260 IQCEQ6IPM2 695 aa16.04■□□□□ 0.16
NFIX-208ENST00000587260 CACNA2D4Q7Z3S7 1137 aa16.04■□□□□ 0.16
NFIX-208ENST00000587260 HASPINQ8TF76 798 aa16.04■□□□□ 0.16
NFIX-208ENST00000587260 TAF4BQ92750 862 aa16.04■□□□□ 0.16
NFIX-208ENST00000587260 FAXDC2Q96IV6 333 aa16.04■□□□□ 0.16
NFIX-208ENST00000587260 STK33Q9BYT3 514 aa16.04■□□□□ 0.16
NFIX-208ENST00000587260 NRDE2Q9H7Z3 1164 aa16.04■□□□□ 0.16
NFIX-208ENST00000587260 R3HCC1Q9Y3T6 440 aaKnown RBP16.04■□□□□ 0.16
NFIX-208ENST00000587260 FHOD1Q9Y613 1164 aa16.04■□□□□ 0.16
NFIX-208ENST00000587260 TSC2P49815 1807 aa16.03■□□□□ 0.16
NFIX-208ENST00000587260 GRXCR1A8MXD5 290 aa16.03■□□□□ 0.16
NFIX-208ENST00000587260 F8W810 466 aa16.03■□□□□ 0.16
NFIX-208ENST00000587260 TLL1O43897 1013 aa16.03■□□□□ 0.16
NFIX-208ENST00000587260 STAU1O95793 577 aaKnown RBP16.03■□□□□ 0.16
NFIX-208ENST00000587260 ATICP31939 592 aa16.03■□□□□ 0.16
NFIX-208ENST00000587260 OR1G1P47890 313 aa16.03■□□□□ 0.16
NFIX-208ENST00000587260 GCNT1Q02742 428 aa16.03■□□□□ 0.16
NFIX-208ENST00000587260 DSC1Q08554 894 aa16.03■□□□□ 0.16
NFIX-208ENST00000587260 GOLGA8FQ08AF8 430 aa16.03■□□□□ 0.16
NFIX-208ENST00000587260 GOLGA8DPQ0D2H9 430 aa16.03■□□□□ 0.16
NFIX-208ENST00000587260 LRMPQ12912 555 aa16.03■□□□□ 0.16
NFIX-208ENST00000587260 WDR44Q5JSH3 913 aa16.03■□□□□ 0.16
NFIX-208ENST00000587260 SPOUT1Q5T280 376 aaKnown RBP16.03■□□□□ 0.16
NFIX-208ENST00000587260 SPOPLQ6IQ16 392 aa16.03■□□□□ 0.16
NFIX-208ENST00000587260 PDXDC1Q6P996 788 aa16.03■□□□□ 0.16
NFIX-208ENST00000587260 ENOSF1Q7L5Y1 443 aa16.03■□□□□ 0.16
NFIX-208ENST00000587260 COLGALT2Q8IYK4 626 aa16.03■□□□□ 0.16
NFIX-208ENST00000587260 CMTR2Q8IYT2 770 aaKnown RBP16.03■□□□□ 0.16
NFIX-208ENST00000587260 CCDC112Q8NEF3 446 aa16.03■□□□□ 0.16
NFIX-208ENST00000587260 PHOSPHO2Q8TCD6 241 aa16.03■□□□□ 0.16
NFIX-208ENST00000587260 NT5C1BQ96P26 610 aa16.03■□□□□ 0.16
NFIX-208ENST00000587260 VRTNQ9H8Y1 702 aa16.03■□□□□ 0.16
NFIX-208ENST00000587260 DNAJC12Q9UKB3 198 aa16.03■□□□□ 0.16
NFIX-208ENST00000587260 PRG3Q9Y2Y8 225 aaPredicted RBP16.03■□□□□ 0.16
NFIX-208ENST00000587260 MRPL42Q9Y6G3 142 aaKnown RBP16.03■□□□□ 0.16
NFIX-208ENST00000587260 IGFBP6P24592 240 aaPredicted RBP16.02■□□□□ 0.15
NFIX-208ENST00000587260 LRPAP1P30533 357 aa16.02■□□□□ 0.15
NFIX-208ENST00000587260 RBP5P82980 135 aa16.02■□□□□ 0.15
NFIX-208ENST00000587260 HTRA4P83105 476 aaPredicted RBP16.02■□□□□ 0.15
NFIX-208ENST00000587260 CDK17Q00537 523 aa16.02■□□□□ 0.15
NFIX-208ENST00000587260 MEA1Q16626 185 aa16.02■□□□□ 0.15
NFIX-208ENST00000587260 ZNF699Q32M78 642 aa16.02■□□□□ 0.15
NFIX-208ENST00000587260 RRAGAQ7L523 313 aa16.02■□□□□ 0.15
NFIX-208ENST00000587260 TMEM139Q8IV31 216 aa16.02■□□□□ 0.15
NFIX-208ENST00000587260 ARHGEF19Q8IW93 802 aa16.02■□□□□ 0.15
NFIX-208ENST00000587260 C3orf58Q8NDZ4 430 aa16.02■□□□□ 0.15
NFIX-208ENST00000587260 RSPH1Q8WYR4 309 aa16.02■□□□□ 0.15
NFIX-208ENST00000587260 JAKMIP2Q96AA8 810 aa16.02■□□□□ 0.15
NFIX-208ENST00000587260 TRIM44Q96DX7 344 aaPredicted RBP16.02■□□□□ 0.15
NFIX-208ENST00000587260 IMPG2Q9BZV3 1241 aa16.02■□□□□ 0.15
NFIX-208ENST00000587260 XYLT2Q9H1B5 865 aa16.02■□□□□ 0.15
NFIX-208ENST00000587260 KCNF1Q9H3M0 494 aa16.02■□□□□ 0.15
NFIX-208ENST00000587260 CWH43Q9H720 699 aa16.02■□□□□ 0.15
NFIX-208ENST00000587260 UBE2TQ9NPD8 197 aaPredicted RBP16.02■□□□□ 0.15
NFIX-208ENST00000587260 NLRC4Q9NPP4 1024 aa16.02■□□□□ 0.15
NFIX-208ENST00000587260 AIPL1Q9NZN9 384 aa16.02■□□□□ 0.15
NFIX-208ENST00000587260 ANO9A1A5B4 782 aa16.01■□□□□ 0.15
NFIX-208ENST00000587260 LCHNA4D1U4 455 aa16.01■□□□□ 0.15
NFIX-208ENST00000587260 LRRC53A6NM62 1247 aa16.01■□□□□ 0.15
NFIX-208ENST00000587260 PIRO00625 290 aa16.01■□□□□ 0.15
NFIX-208ENST00000587260 KIF4AO95239 1232 aa16.01■□□□□ 0.15
NFIX-208ENST00000587260 SLC11A1P49279 550 aa16.01■□□□□ 0.15
NFIX-208ENST00000587260 NOP14P78316 857 aaKnown RBP16.01■□□□□ 0.15
NFIX-208ENST00000587260 CCZ1BP86790 482 aa16.01■□□□□ 0.15
NFIX-208ENST00000587260 CCZ1P86791 482 aaPredicted RBP16.01■□□□□ 0.15
NFIX-208ENST00000587260 UPP1Q16831 310 aa16.01■□□□□ 0.15
NFIX-208ENST00000587260 TSR1Q2NL82 804 aaKnown RBP16.01■□□□□ 0.15
NFIX-208ENST00000587260 GJB7Q6PEY0 223 aa16.01■□□□□ 0.15
NFIX-208ENST00000587260 WDR59Q6PJI9 974 aa16.01■□□□□ 0.15
NFIX-208ENST00000587260 CHRDL2Q6WN34 429 aa16.01■□□□□ 0.15
NFIX-208ENST00000587260 FMNL3Q8IVF7 1028 aa16.01■□□□□ 0.15
NFIX-208ENST00000587260 TATDN2Q93075 761 aa16.01■□□□□ 0.15
NFIX-208ENST00000587260 HPDLQ96IR7 371 aa16.01■□□□□ 0.15
NFIX-208ENST00000587260 ZNF560Q96MR9 790 aa16.01■□□□□ 0.15
NFIX-208ENST00000587260 UROC1Q96N76 676 aa16.01■□□□□ 0.15
NFIX-208ENST00000587260 AJAP1Q9UKB5 411 aaPredicted RBP16.01■□□□□ 0.15
NFIX-208ENST00000587260 INSL6Q9Y581 213 aa16.01■□□□□ 0.15
NFIX-208ENST00000587260 LAMA2P24043 3122 aaKnown RBP16.01■□□□□ 0.15
NFIX-208ENST00000587260 NT5C1B-RDH14C9J2C7 533 aa16■□□□□ 0.15
NFIX-208ENST00000587260 ITGB1P05556 798 aa16■□□□□ 0.15
NFIX-208ENST00000587260 MYOGP15173 224 aa16■□□□□ 0.15
NFIX-208ENST00000587260 MFAP3P55082 362 aa16■□□□□ 0.15
NFIX-208ENST00000587260 DRAP1Q14919 205 aaPredicted RBP16■□□□□ 0.15
NFIX-208ENST00000587260 SCARA5Q6ZMJ2 495 aa16■□□□□ 0.15
NFIX-208ENST00000587260 LRRC52Q8N7C0 313 aa16■□□□□ 0.15
NFIX-208ENST00000587260 KREMEN1Q96MU8 473 aa16■□□□□ 0.15
NFIX-208ENST00000587260 SPAG5Q96R06 1193 aa16■□□□□ 0.15
NFIX-208ENST00000587260 RAD9AQ99638 391 aa16■□□□□ 0.15
NFIX-208ENST00000587260 BAG1Q99933 345 aaPredicted RBP16■□□□□ 0.15
NFIX-208ENST00000587260 GPR88Q9GZN0 384 aa16■□□□□ 0.15
NFIX-208ENST00000587260 APOBEC3GQ9HC16 384 aaKnown RBP16■□□□□ 0.15
NFIX-208ENST00000587260 NXF1Q9UBU9 619 aaKnown RBP16■□□□□ 0.15
NFIX-208ENST00000587260 RANBP2P49792 3224 aaKnown RBP16■□□□□ 0.15
NFIX-208ENST00000587260 F8VZ95 297 aa15.99■□□□□ 0.15
NFIX-208ENST00000587260 NRP1O14786 923 aa15.99■□□□□ 0.15
NFIX-208ENST00000587260 SPTLC1O15269 473 aa15.99■□□□□ 0.15
NFIX-208ENST00000587260 NRDCO43847 1150 aa15.99■□□□□ 0.15
NFIX-208ENST00000587260 B3GAT3O94766 335 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms