RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 DMWDQ09019 674 aa12.68□□□□□ -0.38
LIG3-207ENST00000586119 DUSP4Q13115 394 aa12.68□□□□□ -0.38
LIG3-207ENST00000586119 NOLC1Q14978 699 aaKnown RBP eCLIP12.68□□□□□ -0.38
LIG3-207ENST00000586119 ARSHQ5FYA8 562 aa12.68□□□□□ -0.38
LIG3-207ENST00000586119 STXBP5Q5T5C0 1151 aa12.68□□□□□ -0.38
LIG3-207ENST00000586119 TPGS2Q68CL5 300 aa12.68□□□□□ -0.38
LIG3-207ENST00000586119 DTHD1Q6ZMT9 781 aa12.68□□□□□ -0.38
LIG3-207ENST00000586119 TTC9BQ8N6N2 239 aa12.68□□□□□ -0.38
LIG3-207ENST00000586119 TTC8Q8TAM2 541 aa12.68□□□□□ -0.38
LIG3-207ENST00000586119 ZSCAN18Q8TBC5 510 aaPredicted RBP12.68□□□□□ -0.38
LIG3-207ENST00000586119 FAM3CQ92520 227 aa12.68□□□□□ -0.38
LIG3-207ENST00000586119 SMARCD2Q92925 531 aa12.68□□□□□ -0.38
LIG3-207ENST00000586119 DRC1Q96MC2 740 aa12.68□□□□□ -0.38
LIG3-207ENST00000586119 LRRC3BQ96PB8 259 aa12.68□□□□□ -0.38
LIG3-207ENST00000586119 DNAJC25Q9H1X3 360 aa12.68□□□□□ -0.38
LIG3-207ENST00000586119 PARD6AQ9NPB6 346 aa12.68□□□□□ -0.38
LIG3-207ENST00000586119 PRMT8Q9NR22 394 aaPredicted RBP12.68□□□□□ -0.38
LIG3-207ENST00000586119 SMG5Q9UPR3 1016 aaKnown RBP12.68□□□□□ -0.38
LIG3-207ENST00000586119 PCDHGA2Q9Y5H1 932 aa12.68□□□□□ -0.38
LIG3-207ENST00000586119 A0A1W2PRU2 124 aa12.67□□□□□ -0.38
LIG3-207ENST00000586119 HEPACAM2A8MVW5 462 aa12.67□□□□□ -0.38
LIG3-207ENST00000586119 LACTBL1A8MY62 500 aa12.67□□□□□ -0.38
LIG3-207ENST00000586119 M0QZQ0 153 aa12.67□□□□□ -0.38
LIG3-207ENST00000586119 NCAM2O15394 837 aa12.67□□□□□ -0.38
LIG3-207ENST00000586119 TOM1L1O75674 476 aa12.67□□□□□ -0.38
LIG3-207ENST00000586119 MICAL2O94851 1124 aa12.67□□□□□ -0.38
LIG3-207ENST00000586119 CHRNB1P11230 501 aa12.67□□□□□ -0.38
LIG3-207ENST00000586119 PLS3P13797 630 aa12.67□□□□□ -0.38
LIG3-207ENST00000586119 CPB1P15086 417 aa12.67□□□□□ -0.38
LIG3-207ENST00000586119 PSMC3P17980 439 aa12.67□□□□□ -0.38
LIG3-207ENST00000586119 GUCY2CP25092 1073 aa12.67□□□□□ -0.38
LIG3-207ENST00000586119 MARCKSP29966 332 aaPredicted RBP12.67□□□□□ -0.38
LIG3-207ENST00000586119 MATR3P43243 847 aaKnown RBP eCLIP12.67□□□□□ -0.38
LIG3-207ENST00000586119 RPS9P46781 194 aaKnown RBP12.67□□□□□ -0.38
LIG3-207ENST00000586119 SLC12A3P55017 1021 aa12.67□□□□□ -0.38
LIG3-207ENST00000586119 HMGN5P82970 282 aaKnown RBP12.67□□□□□ -0.38
LIG3-207ENST00000586119 STRN3Q13033 797 aa12.67□□□□□ -0.38
LIG3-207ENST00000586119 ZBTB6Q15916 424 aa12.67□□□□□ -0.38
LIG3-207ENST00000586119 IQCEQ6IPM2 695 aa12.67□□□□□ -0.38
LIG3-207ENST00000586119 ZNF280DQ6N043 979 aa12.67□□□□□ -0.38
LIG3-207ENST00000586119 TMC8Q8IU68 726 aa12.67□□□□□ -0.38
LIG3-207ENST00000586119 SYT2Q8N9I0 419 aaPredicted RBP12.67□□□□□ -0.38
LIG3-207ENST00000586119 SPIRE2Q8WWL2 714 aa12.67□□□□□ -0.38
LIG3-207ENST00000586119 DNASE1L2Q92874 299 aa12.67□□□□□ -0.38
LIG3-207ENST00000586119 KIF12Q96FN5 646 aa12.67□□□□□ -0.38
LIG3-207ENST00000586119 ZSCAN31Q96LW9 406 aaPredicted RBP12.67□□□□□ -0.38
LIG3-207ENST00000586119 EPC1Q9H2F5 836 aa12.67□□□□□ -0.38
LIG3-207ENST00000586119 RBM12Q9NTZ6 932 aaKnown RBP12.67□□□□□ -0.38
LIG3-207ENST00000586119 C2orf42Q9NWW7 574 aa12.67□□□□□ -0.38
LIG3-207ENST00000586119 YIPF1Q9Y548 306 aa12.67□□□□□ -0.38
LIG3-207ENST00000586119 PIAS3Q9Y6X2 628 aa12.67□□□□□ -0.38
LIG3-207ENST00000586119 NCOR2Q9Y618 2525 aa12.67□□□□□ -0.38
LIG3-207ENST00000586119 TTC26A0AVF1 554 aa12.66□□□□□ -0.38
LIG3-207ENST00000586119 ARNTLO00327 626 aa12.66□□□□□ -0.38
LIG3-207ENST00000586119 SPTLC1O15269 473 aa12.66□□□□□ -0.38
LIG3-207ENST00000586119 CLDN3O15551 220 aa12.66□□□□□ -0.38
LIG3-207ENST00000586119 PLA2G4BP0C869 781 aa12.66□□□□□ -0.38
LIG3-207ENST00000586119 LRPAP1P30533 357 aa12.66□□□□□ -0.38
LIG3-207ENST00000586119 MAGEA9P43362 315 aa12.66□□□□□ -0.38
LIG3-207ENST00000586119 EPHA5P54756 1037 aa12.66□□□□□ -0.38
LIG3-207ENST00000586119 SATB1Q01826 763 aa12.66□□□□□ -0.38
LIG3-207ENST00000586119 MCL1Q07820 350 aa12.66□□□□□ -0.38
LIG3-207ENST00000586119 SRSF5Q13243 272 aaKnown RBP12.66□□□□□ -0.38
LIG3-207ENST00000586119 HYIQ5T013 277 aa12.66□□□□□ -0.38
LIG3-207ENST00000586119 MCTP1Q6DN14 999 aa12.66□□□□□ -0.38
LIG3-207ENST00000586119 MFSD6LQ8IWD5 586 aa12.66□□□□□ -0.38
LIG3-207ENST00000586119 ATAD1Q8NBU5 361 aa12.66□□□□□ -0.38
LIG3-207ENST00000586119 APPL2Q8NEU8 664 aa12.66□□□□□ -0.38
LIG3-207ENST00000586119 BEST2Q8NFU1 509 aa12.66□□□□□ -0.38
LIG3-207ENST00000586119 IRF7Q92985 503 aa12.66□□□□□ -0.38
LIG3-207ENST00000586119 ZFYVE19Q96K21 471 aa12.66□□□□□ -0.38
LIG3-207ENST00000586119 MKNK1Q9BUB5 465 aa12.66□□□□□ -0.38
LIG3-207ENST00000586119 RAB34Q9BZG1 259 aa12.66□□□□□ -0.38
LIG3-207ENST00000586119 CHRDQ9H2X0 955 aa12.66□□□□□ -0.38
LIG3-207ENST00000586119 C17orf75Q9HAS0 396 aa12.66□□□□□ -0.38
LIG3-207ENST00000586119 ASAH2Q9NR71 780 aa12.66□□□□□ -0.38
LIG3-207ENST00000586119 MRPS17Q9Y2R5 130 aaKnown RBP12.66□□□□□ -0.38
LIG3-207ENST00000586119 DCDC2BA2VCK2 349 aa12.65□□□□□ -0.38
LIG3-207ENST00000586119 VWA3AA6NCI4 1184 aa12.65□□□□□ -0.38
LIG3-207ENST00000586119 SLC38A8A6NNN8 435 aa12.65□□□□□ -0.38
LIG3-207ENST00000586119 MAN2B1O00754 1011 aa12.65□□□□□ -0.38
LIG3-207ENST00000586119 ZNF263O14978 683 aa12.65□□□□□ -0.38
LIG3-207ENST00000586119 FAM189A1O60320 539 aa12.65□□□□□ -0.38
LIG3-207ENST00000586119 OAZ2O95190 189 aa12.65□□□□□ -0.38
LIG3-207ENST00000586119 PRPHP41219 470 aa12.65□□□□□ -0.38
LIG3-207ENST00000586119 ATP2C1P98194 919 aaPredicted RBP12.65□□□□□ -0.38
LIG3-207ENST00000586119 YWHAHQ04917 246 aaPredicted RBP12.65□□□□□ -0.38
LIG3-207ENST00000586119 DHX8Q14562 1220 aaKnown RBP12.65□□□□□ -0.38
LIG3-207ENST00000586119 ENOX2Q16206 610 aaKnown RBP12.65□□□□□ -0.38
LIG3-207ENST00000586119 CENPPQ6IPU0 288 aa12.65□□□□□ -0.38
LIG3-207ENST00000586119 TXNDC11Q6PKC3 985 aa12.65□□□□□ -0.38
LIG3-207ENST00000586119 ZPBP2Q6X784 338 aa12.65□□□□□ -0.38
LIG3-207ENST00000586119 DSTYKQ6XUX3 929 aa12.65□□□□□ -0.38
LIG3-207ENST00000586119 GAREM2Q75VX8 874 aa12.65□□□□□ -0.38
LIG3-207ENST00000586119 HAUS6Q7Z4H7 955 aa12.65□□□□□ -0.38
LIG3-207ENST00000586119 ELMOD1Q8N336 334 aa12.65□□□□□ -0.38
LIG3-207ENST00000586119 FAM212AQ96EL1 285 aa12.65□□□□□ -0.38
LIG3-207ENST00000586119 IKZF4Q9H2S9 585 aa12.65□□□□□ -0.38
LIG3-207ENST00000586119 SLITRK6Q9H5Y7 841 aa12.65□□□□□ -0.38
LIG3-207ENST00000586119 SH2B1Q9NRF2 756 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms