RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 SYN3O14994 580 aa23.12■■□□□ 1.29
RETREG3-202ENST00000585726 NCK2O43639 380 aa23.12■■□□□ 1.29
RETREG3-202ENST00000585726 AARSP49588 968 aaKnown RBP eCLIP23.12■■□□□ 1.29
RETREG3-202ENST00000585726 NDUFV1P49821 464 aa23.12■■□□□ 1.29
RETREG3-202ENST00000585726 ADAM15Q13444 863 aa23.12■■□□□ 1.29
RETREG3-202ENST00000585726 VARS2Q5ST30 1063 aaKnown RBP23.12■■□□□ 1.29
RETREG3-202ENST00000585726 CAVIN1Q6NZI2 390 aaKnown RBP23.12■■□□□ 1.29
RETREG3-202ENST00000585726 PDXDC1Q6P996 788 aa23.12■■□□□ 1.29
RETREG3-202ENST00000585726 PALB2Q86YC2 1186 aa23.12■■□□□ 1.29
RETREG3-202ENST00000585726 APPL2Q8NEU8 664 aa23.12■■□□□ 1.29
RETREG3-202ENST00000585726 VN1R2Q8NFZ6 395 aa23.12■■□□□ 1.29
RETREG3-202ENST00000585726 CXorf38Q8TB03 319 aa23.12■■□□□ 1.29
RETREG3-202ENST00000585726 PABPC5Q96DU9 382 aaKnown RBP23.12■■□□□ 1.29
RETREG3-202ENST00000585726 MKNK1Q9BUB5 465 aa23.12■■□□□ 1.29
RETREG3-202ENST00000585726 TMEM63CQ9P1W3 806 aa23.12■■□□□ 1.29
RETREG3-202ENST00000585726 KPNA7A9QM74 516 aa23.11■■□□□ 1.29
RETREG3-202ENST00000585726 CYB561D2O14569 222 aa23.11■■□□□ 1.29
RETREG3-202ENST00000585726 CLSTN1O94985 981 aa23.11■■□□□ 1.29
RETREG3-202ENST00000585726 SLC34A2O95436 690 aa23.11■■□□□ 1.29
RETREG3-202ENST00000585726 CST3P01034 146 aaPredicted RBP23.11■■□□□ 1.29
RETREG3-202ENST00000585726 ADH1AP07327 375 aa23.11■■□□□ 1.29
RETREG3-202ENST00000585726 ODC1P11926 461 aa23.11■■□□□ 1.29
RETREG3-202ENST00000585726 KCNA5P22460 613 aa23.11■■□□□ 1.29
RETREG3-202ENST00000585726 PNPLA4P41247 253 aa23.11■■□□□ 1.29
RETREG3-202ENST00000585726 TRPC3Q13507 836 aa23.11■■□□□ 1.29
RETREG3-202ENST00000585726 ANKS3Q6ZW76 656 aa23.11■■□□□ 1.29
RETREG3-202ENST00000585726 USP37Q86T82 979 aa23.11■■□□□ 1.29
RETREG3-202ENST00000585726 ZC3H3Q8IXZ2 948 aaKnown RBP23.11■■□□□ 1.29
RETREG3-202ENST00000585726 UBE2ZQ9H832 354 aaPredicted RBP23.11■■□□□ 1.29
RETREG3-202ENST00000585726 BARX2Q9UMQ3 279 aaPredicted RBP23.11■■□□□ 1.29
RETREG3-202ENST00000585726 HCFC2Q9Y5Z7 792 aa23.11■■□□□ 1.29
RETREG3-202ENST00000585726 SLC16A3O15427 465 aaKnown RBP23.1■■□□□ 1.29
RETREG3-202ENST00000585726 ADAM12O43184 909 aa23.1■■□□□ 1.29
RETREG3-202ENST00000585726 GLP2RO95838 553 aa23.1■■□□□ 1.29
RETREG3-202ENST00000585726 EPCAMP16422 314 aa23.1■■□□□ 1.29
RETREG3-202ENST00000585726 PAX3P23760 479 aa23.1■■□□□ 1.29
RETREG3-202ENST00000585726 AP3M2P53677 418 aa23.1■■□□□ 1.29
RETREG3-202ENST00000585726 ARPP19P56211 112 aa23.1■■□□□ 1.29
RETREG3-202ENST00000585726 CLDN10P78369 228 aa23.1■■□□□ 1.29
RETREG3-202ENST00000585726 CREMQ03060 361 aa23.1■■□□□ 1.29
RETREG3-202ENST00000585726 DLX2Q07687 328 aaPredicted RBP23.1■■□□□ 1.29
RETREG3-202ENST00000585726 MYO1EQ12965 1108 aa23.1■■□□□ 1.29
RETREG3-202ENST00000585726 CCDC40Q4G0X9 1142 aa23.1■■□□□ 1.29
RETREG3-202ENST00000585726 C1orf220Q5T0J3 134 aa23.1■■□□□ 1.29
RETREG3-202ENST00000585726 TDRD10Q5VZ19 366 aaKnown RBP23.1■■□□□ 1.29
RETREG3-202ENST00000585726 SASS6Q6UVJ0 657 aa23.1■■□□□ 1.29
RETREG3-202ENST00000585726 RBM43Q6ZSC3 357 aaKnown RBP23.1■■□□□ 1.29
RETREG3-202ENST00000585726 GPR65Q8IYL9 337 aa23.1■■□□□ 1.29
RETREG3-202ENST00000585726 LRRC52Q8N7C0 313 aa23.1■■□□□ 1.29
RETREG3-202ENST00000585726 BORCS6Q96GS4 357 aa23.1■■□□□ 1.29
RETREG3-202ENST00000585726 HPDLQ96IR7 371 aa23.1■■□□□ 1.29
RETREG3-202ENST00000585726 CLSTN3Q9BQT9 956 aa23.1■■□□□ 1.29
RETREG3-202ENST00000585726 FNIP2Q9P278 1114 aa23.1■■□□□ 1.29
RETREG3-202ENST00000585726 MTRRQ9UBK8 725 aa23.1■■□□□ 1.29
RETREG3-202ENST00000585726 RWDD2AQ9UIY3 292 aa23.1■■□□□ 1.29
RETREG3-202ENST00000585726 EYSQ5T1H1 3165 aa23.09■■□□□ 1.29
RETREG3-202ENST00000585726 H3BQ06 376 aaPredicted RBP23.09■■□□□ 1.29
RETREG3-202ENST00000585726 H7C4K7 107 aa23.09■■□□□ 1.29
RETREG3-202ENST00000585726 C4BPAP04003 597 aaKnown RBP23.09■■□□□ 1.29
RETREG3-202ENST00000585726 SPATA31D3P0C874 917 aa23.09■■□□□ 1.29
RETREG3-202ENST00000585726 OR1D2P34982 312 aa23.09■■□□□ 1.29
RETREG3-202ENST00000585726 GCLMP48507 274 aa23.09■■□□□ 1.29
RETREG3-202ENST00000585726 TFF2Q03403 129 aa23.09■■□□□ 1.29
RETREG3-202ENST00000585726 YWHAHQ04917 246 aaPredicted RBP23.09■■□□□ 1.29
RETREG3-202ENST00000585726 CLUL1Q15846 466 aa23.09■■□□□ 1.29
RETREG3-202ENST00000585726 CTC1Q2NKJ3 1217 aa23.09■■□□□ 1.29
RETREG3-202ENST00000585726 CTXN3Q4LDR2 81 aa23.09■■□□□ 1.29
RETREG3-202ENST00000585726 DCAF17Q5H9S7 520 aaPredicted RBP23.09■■□□□ 1.29
RETREG3-202ENST00000585726 TCERG1LQ5VWI1 586 aa23.09■■□□□ 1.29
RETREG3-202ENST00000585726 RSPO2Q6UXX9 243 aaPredicted RBP23.09■■□□□ 1.29
RETREG3-202ENST00000585726 SPATA31D4Q6ZUB0 917 aa23.09■■□□□ 1.29
RETREG3-202ENST00000585726 FILIP1Q7Z7B0 1213 aa23.09■■□□□ 1.29
RETREG3-202ENST00000585726 PPFIBP1Q86W92 1011 aa23.09■■□□□ 1.29
RETREG3-202ENST00000585726 SLC22A17Q8WUG5 538 aa23.09■■□□□ 1.29
RETREG3-202ENST00000585726 CEP63Q96MT8 703 aa23.09■■□□□ 1.29
RETREG3-202ENST00000585726 SRRTQ9BXP5 876 aaKnown RBP23.09■■□□□ 1.29
RETREG3-202ENST00000585726 THEGQ9P2T0 379 aa23.09■■□□□ 1.29
RETREG3-202ENST00000585726 DACH1Q9UI36 760 aa23.09■■□□□ 1.29
RETREG3-202ENST00000585726 COG5Q9UP83 839 aa23.09■■□□□ 1.29
RETREG3-202ENST00000585726 SNX9Q9Y5X1 595 aa23.09■■□□□ 1.29
RETREG3-202ENST00000585726 CDY1Q9Y6F8 540 aa23.09■■□□□ 1.29
RETREG3-202ENST00000585726 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.08■■□□□ 1.29
RETREG3-202ENST00000585726 FSD2A1L4K1 749 aa23.08■■□□□ 1.29
RETREG3-202ENST00000585726 SPDYE4A6NLX3 237 aa23.08■■□□□ 1.29
RETREG3-202ENST00000585726 IKBKBO14920 756 aa23.08■■□□□ 1.29
RETREG3-202ENST00000585726 TBX10O75333 385 aa23.08■■□□□ 1.29
RETREG3-202ENST00000585726 SRGAP2BP0DMP2 458 aa23.08■■□□□ 1.29
RETREG3-202ENST00000585726 PTMSP20962 102 aa23.08■■□□□ 1.29
RETREG3-202ENST00000585726 LTBRP36941 435 aa23.08■■□□□ 1.29
RETREG3-202ENST00000585726 CLCN4P51793 760 aa23.08■■□□□ 1.29
RETREG3-202ENST00000585726 MYL6P60660 151 aa23.08■■□□□ 1.29
RETREG3-202ENST00000585726 PPP3CAQ08209 521 aa23.08■■□□□ 1.29
RETREG3-202ENST00000585726 OVOS1Q6IE37 1185 aa23.08■■□□□ 1.29
RETREG3-202ENST00000585726 ZNF280DQ6N043 979 aa23.08■■□□□ 1.29
RETREG3-202ENST00000585726 METTL23Q86XA0 190 aa23.08■■□□□ 1.29
RETREG3-202ENST00000585726 CREBRFQ8IUR6 639 aa23.08■■□□□ 1.29
RETREG3-202ENST00000585726 APOL5Q9BWW9 433 aa23.08■■□□□ 1.29
RETREG3-202ENST00000585726 ARMCX3Q9UH62 379 aaPredicted RBP23.08■■□□□ 1.29
RETREG3-202ENST00000585726 BACE2Q9Y5Z0 518 aa23.08■■□□□ 1.29
RETREG3-202ENST00000585726 REV3LO60673 3130 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms