RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 DNM3Q9UQ16 869 aa11.36□□□□□ -0.59
CASC3-210ENST00000584997 CNOT1A5YKK6 2376 aaKnown RBP11.36□□□□□ -0.59
CASC3-210ENST00000584997 SDK1Q7Z5N4 2213 aa11.35□□□□□ -0.59
CASC3-210ENST00000584997 HEPACAM2A8MVW5 462 aa11.35□□□□□ -0.59
CASC3-210ENST00000584997 E9PMD0 336 aa11.35□□□□□ -0.59
CASC3-210ENST00000584997 SLC16A4O15374 487 aa11.35□□□□□ -0.59
CASC3-210ENST00000584997 LRP3O75074 770 aa11.35□□□□□ -0.59
CASC3-210ENST00000584997 KRT37O76014 449 aa11.35□□□□□ -0.59
CASC3-210ENST00000584997 RETP07949 1114 aa11.35□□□□□ -0.59
CASC3-210ENST00000584997 PROZP22891 400 aa11.35□□□□□ -0.59
CASC3-210ENST00000584997 MATR3P43243 847 aaKnown RBP eCLIP11.35□□□□□ -0.59
CASC3-210ENST00000584997 KPNA1P52294 538 aaPredicted RBP11.35□□□□□ -0.59
CASC3-210ENST00000584997 YWHAHQ04917 246 aaPredicted RBP11.35□□□□□ -0.59
CASC3-210ENST00000584997 PLD1Q13393 1074 aa11.35□□□□□ -0.59
CASC3-210ENST00000584997 SIM2Q14190 667 aaPredicted RBP11.35□□□□□ -0.59
CASC3-210ENST00000584997 LRRC32Q14392 662 aa11.35□□□□□ -0.59
CASC3-210ENST00000584997 NOLC1Q14978 699 aaKnown RBP eCLIP11.35□□□□□ -0.59
CASC3-210ENST00000584997 TEAD2Q15562 447 aa11.35□□□□□ -0.59
CASC3-210ENST00000584997 C1orf228Q6PIY5 440 aa11.35□□□□□ -0.59
CASC3-210ENST00000584997 RNF19BQ6ZMZ0 732 aa11.35□□□□□ -0.59
CASC3-210ENST00000584997 TAS1R3Q7RTX0 852 aa11.35□□□□□ -0.59
CASC3-210ENST00000584997 SHKBP1Q8TBC3 707 aa11.35□□□□□ -0.59
CASC3-210ENST00000584997 FAM200AQ8TCP9 573 aa11.35□□□□□ -0.59
CASC3-210ENST00000584997 MSANTD3Q96H12 275 aa11.35□□□□□ -0.59
CASC3-210ENST00000584997 GPR88Q9GZN0 384 aa11.35□□□□□ -0.59
CASC3-210ENST00000584997 TRPV4Q9HBA0 871 aa11.35□□□□□ -0.59
CASC3-210ENST00000584997 PCDHB8Q9UN66 801 aa11.35□□□□□ -0.59
CASC3-210ENST00000584997 YIPF1Q9Y548 306 aa11.35□□□□□ -0.59
CASC3-210ENST00000584997 SPAG17Q6Q759 2223 aa11.34□□□□□ -0.59
CASC3-210ENST00000584997 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.34□□□□□ -0.59
CASC3-210ENST00000584997 A0A1W2PRU2 124 aa11.34□□□□□ -0.59
CASC3-210ENST00000584997 SLC38A8A6NNN8 435 aa11.34□□□□□ -0.59
CASC3-210ENST00000584997 MOSPD3O75425 235 aa11.34□□□□□ -0.59
CASC3-210ENST00000584997 TOM1L1O75674 476 aa11.34□□□□□ -0.59
CASC3-210ENST00000584997 ADRB1P08588 477 aa11.34□□□□□ -0.59
CASC3-210ENST00000584997 CHRNB1P11230 501 aa11.34□□□□□ -0.59
CASC3-210ENST00000584997 TRAPPC10P48553 1259 aa11.34□□□□□ -0.59
CASC3-210ENST00000584997 EPHB3P54753 998 aa11.34□□□□□ -0.59
CASC3-210ENST00000584997 EPHA5P54756 1037 aa11.34□□□□□ -0.59
CASC3-210ENST00000584997 MLLT6P55198 1093 aaPredicted RBP11.34□□□□□ -0.59
CASC3-210ENST00000584997 ST3GAL1Q11201 340 aa11.34□□□□□ -0.59
CASC3-210ENST00000584997 PTGDRQ13258 359 aa11.34□□□□□ -0.59
CASC3-210ENST00000584997 GAS6Q14393 721 aa11.34□□□□□ -0.59
CASC3-210ENST00000584997 PDIA5Q14554 519 aa11.34□□□□□ -0.59
CASC3-210ENST00000584997 NBR1Q14596 966 aa11.34□□□□□ -0.59
CASC3-210ENST00000584997 SEZ6Q53EL9 994 aa11.34□□□□□ -0.59
CASC3-210ENST00000584997 KRT79Q5XKE5 535 aa11.34□□□□□ -0.59
CASC3-210ENST00000584997 USP37Q86T82 979 aa11.34□□□□□ -0.59
CASC3-210ENST00000584997 DAW1Q8N136 415 aa11.34□□□□□ -0.59
CASC3-210ENST00000584997 SPEM1Q8N4L4 309 aa11.34□□□□□ -0.59
CASC3-210ENST00000584997 ZBTB45Q96K62 511 aaPredicted RBP11.34□□□□□ -0.59
CASC3-210ENST00000584997 PGLYRP2Q96PD5 576 aa11.34□□□□□ -0.59
CASC3-210ENST00000584997 RUSC1Q9BVN2 902 aa11.34□□□□□ -0.59
CASC3-210ENST00000584997 C8orf33Q9H7E9 229 aaPredicted RBP11.34□□□□□ -0.59
CASC3-210ENST00000584997 C17orf75Q9HAS0 396 aa11.34□□□□□ -0.59
CASC3-210ENST00000584997 SEMA4GQ9NTN9 838 aa11.34□□□□□ -0.59
CASC3-210ENST00000584997 TUBGCP4Q9UGJ1 667 aa11.34□□□□□ -0.59
CASC3-210ENST00000584997 NUP210Q8TEM1 1887 aaPredicted RBP11.34□□□□□ -0.59
CASC3-210ENST00000584997 NCANO14594 1321 aa11.34□□□□□ -0.59
CASC3-210ENST00000584997 CHURC1-FNTBB4DL54 471 aa11.33□□□□□ -0.6
CASC3-210ENST00000584997 ARNTLO00327 626 aa11.33□□□□□ -0.6
CASC3-210ENST00000584997 DPYSL4O14531 572 aa11.33□□□□□ -0.6
CASC3-210ENST00000584997 ABLIM1O14639 778 aa11.33□□□□□ -0.6
CASC3-210ENST00000584997 SLC30A4O14863 429 aa11.33□□□□□ -0.6
CASC3-210ENST00000584997 CHADO15335 359 aa11.33□□□□□ -0.6
CASC3-210ENST00000584997 OR4Q2P0C623 313 aa11.33□□□□□ -0.6
CASC3-210ENST00000584997 CXCL8P10145 99 aa11.33□□□□□ -0.6
CASC3-210ENST00000584997 CNR2P34972 360 aa11.33□□□□□ -0.6
CASC3-210ENST00000584997 ALDH1A3P47895 512 aa11.33□□□□□ -0.6
CASC3-210ENST00000584997 SOX9P48436 509 aa11.33□□□□□ -0.6
CASC3-210ENST00000584997 FNTBP49356 437 aa11.33□□□□□ -0.6
CASC3-210ENST00000584997 SMTNP53814 917 aa11.33□□□□□ -0.6
CASC3-210ENST00000584997 MAPK7Q13164 816 aa11.33□□□□□ -0.6
CASC3-210ENST00000584997 SLC10A6Q3KNW5 377 aa11.33□□□□□ -0.6
CASC3-210ENST00000584997 PPM1JQ5JR12 505 aa11.33□□□□□ -0.6
CASC3-210ENST00000584997 HEATR6Q6AI08 1181 aaKnown RBP11.33□□□□□ -0.6
CASC3-210ENST00000584997 RINT1Q6NUQ1 792 aa11.33□□□□□ -0.6
CASC3-210ENST00000584997 PRR23CQ6ZRP0 262 aa11.33□□□□□ -0.6
CASC3-210ENST00000584997 CEP68Q76N32 757 aa11.33□□□□□ -0.6
CASC3-210ENST00000584997 HAUS6Q7Z4H7 955 aa11.33□□□□□ -0.6
CASC3-210ENST00000584997 CCDC83Q8IWF9 413 aa11.33□□□□□ -0.6
CASC3-210ENST00000584997 IGSF22Q8N9C0 903 aa11.33□□□□□ -0.6
CASC3-210ENST00000584997 FAM184AQ8NB25 1140 aa11.33□□□□□ -0.6
CASC3-210ENST00000584997 KIF12Q96FN5 646 aa11.33□□□□□ -0.6
CASC3-210ENST00000584997 TIPINQ9BVW5 301 aa11.33□□□□□ -0.6
CASC3-210ENST00000584997 OXCT2Q9BYC2 517 aaPredicted RBP11.33□□□□□ -0.6
CASC3-210ENST00000584997 RBM12Q9NTZ6 932 aaKnown RBP11.33□□□□□ -0.6
CASC3-210ENST00000584997 TIMM13Q9Y5L4 95 aaPredicted RBP11.33□□□□□ -0.6
CASC3-210ENST00000584997 KIF26AQ9ULI4 1882 aaPredicted RBP11.32□□□□□ -0.6
CASC3-210ENST00000584997 OR6C75A6NL08 312 aa11.32□□□□□ -0.6
CASC3-210ENST00000584997 SFI1A8K8P3 1242 aa11.32□□□□□ -0.6
CASC3-210ENST00000584997 PP2D1A8MPX8 630 aa11.32□□□□□ -0.6
CASC3-210ENST00000584997 SPECC1L-ADORA2AF8WAN1 911 aa11.32□□□□□ -0.6
CASC3-210ENST00000584997 M0QZQ0 153 aa11.32□□□□□ -0.6
CASC3-210ENST00000584997 CLDN3O15551 220 aa11.32□□□□□ -0.6
CASC3-210ENST00000584997 MEFVO15553 781 aaPredicted RBP11.32□□□□□ -0.6
CASC3-210ENST00000584997 XPOTO43592 962 aaKnown RBP11.32□□□□□ -0.6
CASC3-210ENST00000584997 HRO43593 1189 aa11.32□□□□□ -0.6
CASC3-210ENST00000584997 FOXD2O60548 495 aaPredicted RBP11.32□□□□□ -0.6
CASC3-210ENST00000584997 OAZ2O95190 189 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms