RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 CXCL14O95715 111 aa17.26■□□□□ 0.35
CSNK1D-223ENST00000584472 URODP06132 367 aa17.26■□□□□ 0.35
CSNK1D-223ENST00000584472 KRT13P13646 458 aa17.26■□□□□ 0.35
CSNK1D-223ENST00000584472 ZNF18P17022 549 aa17.26■□□□□ 0.35
CSNK1D-223ENST00000584472 CLCNKBP51801 687 aa17.26■□□□□ 0.35
CSNK1D-223ENST00000584472 ZP2Q05996 745 aa17.26■□□□□ 0.35
CSNK1D-223ENST00000584472 ENPEPQ07075 957 aa17.26■□□□□ 0.35
CSNK1D-223ENST00000584472 BFSP1Q12934 665 aa17.26■□□□□ 0.35
CSNK1D-223ENST00000584472 SURF1Q15526 300 aa17.26■□□□□ 0.35
CSNK1D-223ENST00000584472 PTPN14Q15678 1187 aa17.26■□□□□ 0.35
CSNK1D-223ENST00000584472 USP41Q3LFD5 358 aa17.26■□□□□ 0.35
CSNK1D-223ENST00000584472 TMEM184AQ6ZMB5 413 aa17.26■□□□□ 0.35
CSNK1D-223ENST00000584472 RNF214Q8ND24 703 aa17.26■□□□□ 0.35
CSNK1D-223ENST00000584472 TMC2Q8TDI7 906 aa17.26■□□□□ 0.35
CSNK1D-223ENST00000584472 PARD3BQ8TEW8 1205 aa17.26■□□□□ 0.35
CSNK1D-223ENST00000584472 C18orf25Q96B23 403 aaPredicted RBP17.26■□□□□ 0.35
CSNK1D-223ENST00000584472 FAM212AQ96EL1 285 aa17.26■□□□□ 0.35
CSNK1D-223ENST00000584472 GOLGA2P5Q9HBQ8 144 aa17.26■□□□□ 0.35
CSNK1D-223ENST00000584472 PDE11AQ9HCR9 933 aa17.26■□□□□ 0.35
CSNK1D-223ENST00000584472 MRPL17Q9NRX2 175 aaKnown RBP17.26■□□□□ 0.35
CSNK1D-223ENST00000584472 CHST7Q9NS84 486 aa17.26■□□□□ 0.35
CSNK1D-223ENST00000584472 CD207Q9UJ71 328 aa17.26■□□□□ 0.35
CSNK1D-223ENST00000584472 UBQLN1Q9UMX0 589 aaKnown RBP17.26■□□□□ 0.35
CSNK1D-223ENST00000584472 C2CD2Q9Y426 696 aa17.26■□□□□ 0.35
CSNK1D-223ENST00000584472 KCNJ18B7U540 433 aa17.25■□□□□ 0.35
CSNK1D-223ENST00000584472 GOLGA6L19H0YKK7 550 aa17.25■□□□□ 0.35
CSNK1D-223ENST00000584472 MBTPS2O43462 519 aa17.25■□□□□ 0.35
CSNK1D-223ENST00000584472 B3GAT3O94766 335 aa17.25■□□□□ 0.35
CSNK1D-223ENST00000584472 EEF1GP26641 437 aaKnown RBP17.25■□□□□ 0.35
CSNK1D-223ENST00000584472 LRPAP1P30533 357 aa17.25■□□□□ 0.35
CSNK1D-223ENST00000584472 GLUD2P49448 558 aa17.25■□□□□ 0.35
CSNK1D-223ENST00000584472 VAMP7P51809 220 aa17.25■□□□□ 0.35
CSNK1D-223ENST00000584472 DLG4P78352 724 aa17.25■□□□□ 0.35
CSNK1D-223ENST00000584472 DSG1Q02413 1049 aa17.25■□□□□ 0.35
CSNK1D-223ENST00000584472 KCNJ12Q14500 433 aa17.25■□□□□ 0.35
CSNK1D-223ENST00000584472 NT5DC4Q86YG4 428 aa17.25■□□□□ 0.35
CSNK1D-223ENST00000584472 TRIM59Q8IWR1 403 aa17.25■□□□□ 0.35
CSNK1D-223ENST00000584472 SMRP1Q8NCR6 262 aa17.25■□□□□ 0.35
CSNK1D-223ENST00000584472 RABGGTAQ92696 567 aa17.25■□□□□ 0.35
CSNK1D-223ENST00000584472 CCDC127Q96BQ5 260 aa17.25■□□□□ 0.35
CSNK1D-223ENST00000584472 GPR62Q9BZJ7 368 aa17.25■□□□□ 0.35
CSNK1D-223ENST00000584472 RBSNQ9H1K0 784 aa17.25■□□□□ 0.35
CSNK1D-223ENST00000584472 MAGEC2Q9UBF1 373 aaPredicted RBP17.25■□□□□ 0.35
CSNK1D-223ENST00000584472 TUBGCP4Q9UGJ1 667 aa17.25■□□□□ 0.35
CSNK1D-223ENST00000584472 ARIH1Q9Y4X5 557 aaPredicted RBP17.25■□□□□ 0.35
CSNK1D-223ENST00000584472 LRRIQ3A6PVS8 624 aaPredicted RBP17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 PODXLO00592 558 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 TRAPPC3O43617 180 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 GPR37L1O60883 481 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 LILRB3O75022 631 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 SRGAP2BP0DMP2 458 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 ALADP13716 330 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 GTF2F1P35269 517 aaKnown RBP eCLIP17.24■□□□□ 0.351e-7■■■■■ 38.7
CSNK1D-223ENST00000584472 TPM4P67936 248 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 CLDN10P78369 228 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 CREMQ03060 361 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 SPAG1Q07617 926 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 DLX2Q07687 328 aaPredicted RBP17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 KCNC3Q14003 757 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 TMEM132DQ14C87 1099 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 TCP11X2Q5H9J9 407 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 C1orf220Q5T0J3 134 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 KIAA0319Q5VV43 1072 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 JADE1Q6IE81 842 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 KIAA1841Q6NSI8 718 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 TAS1R1Q7RTX1 841 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 USP37Q86T82 979 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 RBM23Q86U06 439 aaKnown RBP17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 CREBRFQ8IUR6 639 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 EFCAB13Q8IY85 973 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 BEST2Q8NFU1 509 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 HASPINQ8TF76 798 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 AUTS2Q8WXX7 1259 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 FNBP1Q96RU3 617 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 EMILIN2Q9BXX0 1053 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 IGFLR1Q9H665 355 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 CD320Q9NPF0 282 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 CLEC1BQ9P126 229 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 C5orf42Q9H799 3197 aa17.24■□□□□ 0.35
CSNK1D-223ENST00000584472 PTPRJQ12913 1337 aa17.23■□□□□ 0.35
CSNK1D-223ENST00000584472 TULP1O00294 542 aaPredicted RBP17.23■□□□□ 0.35
CSNK1D-223ENST00000584472 PER2O15055 1255 aa17.23■□□□□ 0.35
CSNK1D-223ENST00000584472 NFICP08651 508 aa17.23■□□□□ 0.35
CSNK1D-223ENST00000584472 TRIM49P0CI25 452 aa17.23■□□□□ 0.35
CSNK1D-223ENST00000584472 TRIM49CP0CI26 452 aa17.23■□□□□ 0.35
CSNK1D-223ENST00000584472 DLATP10515 647 aaKnown RBP17.23■□□□□ 0.35
CSNK1D-223ENST00000584472 ATP1A3P13637 1013 aa17.23■□□□□ 0.35
CSNK1D-223ENST00000584472 CA8P35219 290 aa17.23■□□□□ 0.35
CSNK1D-223ENST00000584472 MTIF2P46199 727 aaKnown RBP17.23■□□□□ 0.35
CSNK1D-223ENST00000584472 NDUFV1P49821 464 aa17.23■□□□□ 0.35
CSNK1D-223ENST00000584472 DCAF17Q5H9S7 520 aaPredicted RBP17.23■□□□□ 0.35
CSNK1D-223ENST00000584472 PDXDC1Q6P996 788 aa17.23■□□□□ 0.35
CSNK1D-223ENST00000584472 CD300LGQ6UXG3 332 aa17.23■□□□□ 0.35
CSNK1D-223ENST00000584472 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.23■□□□□ 0.35
CSNK1D-223ENST00000584472 WDR49Q8IV35 697 aa17.23■□□□□ 0.35
CSNK1D-223ENST00000584472 C3orf58Q8NDZ4 430 aa17.23■□□□□ 0.35
CSNK1D-223ENST00000584472 CGRRF1Q99675 332 aa17.23■□□□□ 0.35
CSNK1D-223ENST00000584472 TTPALQ9BTX7 342 aa17.23■□□□□ 0.35
CSNK1D-223ENST00000584472 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.23■□□□□ 0.35
CSNK1D-223ENST00000584472 CLASP2O75122 1294 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms