RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.23□□□□□ -0.45
CCDC47-206ENST00000584112 FAM221BA6H8Z2 402 aa12.22□□□□□ -0.45
CCDC47-206ENST00000584112 K7ESF4 209 aa12.22□□□□□ -0.45
CCDC47-206ENST00000584112 C2CD2LO14523 706 aa12.22□□□□□ -0.45
CCDC47-206ENST00000584112 LIG1P18858 919 aa12.22□□□□□ -0.45
CCDC47-206ENST00000584112 RAP1GAPP47736 663 aa12.22□□□□□ -0.45
CCDC47-206ENST00000584112 ATP2C1P98194 919 aaPredicted RBP12.22□□□□□ -0.45
CCDC47-206ENST00000584112 DSG1Q02413 1049 aa12.22□□□□□ -0.45
CCDC47-206ENST00000584112 CREMQ03060 361 aa12.22□□□□□ -0.45
CCDC47-206ENST00000584112 USP41Q3LFD5 358 aa12.22□□□□□ -0.45
CCDC47-206ENST00000584112 MAMSTRQ6ZN01 415 aa12.22□□□□□ -0.45
CCDC47-206ENST00000584112 GPR65Q8IYL9 337 aa12.22□□□□□ -0.45
CCDC47-206ENST00000584112 RNF168Q8IYW5 571 aaPredicted RBP12.22□□□□□ -0.45
CCDC47-206ENST00000584112 GSTCDQ8NEC7 633 aa12.22□□□□□ -0.45
CCDC47-206ENST00000584112 ZNF707Q96C28 371 aaPredicted RBP12.22□□□□□ -0.45
CCDC47-206ENST00000584112 DRC1Q96MC2 740 aa12.22□□□□□ -0.45
CCDC47-206ENST00000584112 KXD1Q9BQD3 176 aa12.22□□□□□ -0.45
CCDC47-206ENST00000584112 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.22□□□□□ -0.45
CCDC47-206ENST00000584112 VPS45Q9NRW7 570 aa12.22□□□□□ -0.45
CCDC47-206ENST00000584112 C2orf42Q9NWW7 574 aa12.22□□□□□ -0.45
CCDC47-206ENST00000584112 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.22□□□□□ -0.45
CCDC47-206ENST00000584112 KLK14Q9P0G3 267 aa12.22□□□□□ -0.45
CCDC47-206ENST00000584112 ADAM28Q9UKQ2 775 aa12.22□□□□□ -0.45
CCDC47-206ENST00000584112 SMC3Q9UQE7 1217 aa12.22□□□□□ -0.45
CCDC47-206ENST00000584112 ANK1P16157 1881 aa12.21□□□□□ -0.45
CCDC47-206ENST00000584112 SF3B1O75533 1304 aaKnown RBP eCLIP12.21□□□□□ -0.45
CCDC47-206ENST00000584112 MGAQ8IWI9 3026 aa12.21□□□□□ -0.45
CCDC47-206ENST00000584112 E9PMD0 336 aa12.21□□□□□ -0.45
CCDC47-206ENST00000584112 K7ERI5 159 aa12.21□□□□□ -0.45
CCDC47-206ENST00000584112 RECQL4O94761 1208 aa12.21□□□□□ -0.45
CCDC47-206ENST00000584112 EFEMP2O95967 443 aa12.21□□□□□ -0.45
CCDC47-206ENST00000584112 C1RP00736 705 aa12.21□□□□□ -0.45
CCDC47-206ENST00000584112 THP07101 528 aa12.21□□□□□ -0.45
CCDC47-206ENST00000584112 DMP1Q13316 513 aaPredicted RBP12.21□□□□□ -0.45
CCDC47-206ENST00000584112 TUSC3Q13454 348 aa12.21□□□□□ -0.45
CCDC47-206ENST00000584112 HSP90AA2PQ14568 343 aaPredicted RBP12.21□□□□□ -0.45
CCDC47-206ENST00000584112 ARL6IP4Q66PJ3 421 aaKnown RBP12.21□□□□□ -0.45
CCDC47-206ENST00000584112 FUT10Q6P4F1 479 aa12.21□□□□□ -0.45
CCDC47-206ENST00000584112 TBC1D32Q96NH3 1257 aa12.21□□□□□ -0.45
CCDC47-206ENST00000584112 TIPINQ9BVW5 301 aa12.21□□□□□ -0.45
CCDC47-206ENST00000584112 NT5C3AQ9H0P0 336 aa12.21□□□□□ -0.45
CCDC47-206ENST00000584112 C17orf75Q9HAS0 396 aa12.21□□□□□ -0.45
CCDC47-206ENST00000584112 LMAN1LQ9HAT1 526 aa12.21□□□□□ -0.45
CCDC47-206ENST00000584112 RXFP1Q9HBX9 757 aa12.21□□□□□ -0.45
CCDC47-206ENST00000584112 CHST7Q9NS84 486 aa12.21□□□□□ -0.45
CCDC47-206ENST00000584112 SNTG2Q9NY99 539 aa12.21□□□□□ -0.45
CCDC47-206ENST00000584112 FBN2P35556 2912 aa12.21□□□□□ -0.45
CCDC47-206ENST00000584112 TCHHQ07283 1943 aa12.21□□□□□ -0.46
CCDC47-206ENST00000584112 TTLL13PA6NNM8 815 aa12.2□□□□□ -0.46
CCDC47-206ENST00000584112 CCDC169A6NNP5 214 aa12.2□□□□□ -0.46
CCDC47-206ENST00000584112 PP2D1A8MPX8 630 aa12.2□□□□□ -0.46
CCDC47-206ENST00000584112 TEX28O15482 410 aa12.2□□□□□ -0.46
CCDC47-206ENST00000584112 TADA2AO75478 443 aa12.2□□□□□ -0.46
CCDC47-206ENST00000584112 CD2BP2O95400 341 aaKnown RBP12.2□□□□□ -0.46
CCDC47-206ENST00000584112 GLUD1P00367 558 aa12.2□□□□□ -0.46
CCDC47-206ENST00000584112 PEX3P56589 373 aa12.2□□□□□ -0.46
CCDC47-206ENST00000584112 SIM1P81133 766 aaPredicted RBP12.2□□□□□ -0.46
CCDC47-206ENST00000584112 PFKPQ01813 784 aa12.2□□□□□ -0.46
CCDC47-206ENST00000584112 IL17AQ16552 155 aa12.2□□□□□ -0.46
CCDC47-206ENST00000584112 UAP1L1Q3KQV9 507 aa12.2□□□□□ -0.46
CCDC47-206ENST00000584112 ATF7IP2Q5U623 682 aa12.2□□□□□ -0.46
CCDC47-206ENST00000584112 CYP26C1Q6V0L0 522 aa12.2□□□□□ -0.46
CCDC47-206ENST00000584112 TAS1R1Q7RTX1 841 aa12.2□□□□□ -0.46
CCDC47-206ENST00000584112 ZNF513Q8N8E2 541 aaPredicted RBP12.2□□□□□ -0.46
CCDC47-206ENST00000584112 HDAC7Q8WUI4 952 aa12.2□□□□□ -0.46
CCDC47-206ENST00000584112 CDK5RAP3Q96JB5 506 aa12.2□□□□□ -0.46
CCDC47-206ENST00000584112 LOXL4Q96JB6 756 aa12.2□□□□□ -0.46
CCDC47-206ENST00000584112 KIFC3Q9BVG8 833 aa12.2□□□□□ -0.46
CCDC47-206ENST00000584112 TMEM134Q9H6X4 195 aa12.2□□□□□ -0.46
CCDC47-206ENST00000584112 FNIP2Q9P278 1114 aa12.2□□□□□ -0.46
CCDC47-206ENST00000584112 KCNG1Q9UIX4 513 aa12.2□□□□□ -0.46
CCDC47-206ENST00000584112 MRPS17Q9Y2R5 130 aaKnown RBP12.2□□□□□ -0.46
CCDC47-206ENST00000584112 RBM19Q9Y4C8 960 aaKnown RBP12.2□□□□□ -0.46
CCDC47-206ENST00000584112 LNP1A1A4G5 178 aa12.19□□□□□ -0.46
CCDC47-206ENST00000584112 F8W810 466 aa12.19□□□□□ -0.46
CCDC47-206ENST00000584112 PTGESO14684 152 aa12.19□□□□□ -0.46
CCDC47-206ENST00000584112 SLC26A4O43511 780 aa12.19□□□□□ -0.46
CCDC47-206ENST00000584112 HIP1RO75146 1068 aa12.19□□□□□ -0.46
CCDC47-206ENST00000584112 BMP15O95972 392 aa12.19□□□□□ -0.46
CCDC47-206ENST00000584112 EDN1P05305 212 aa12.19□□□□□ -0.46
CCDC47-206ENST00000584112 SPATA31D3P0C874 917 aa12.19□□□□□ -0.46
CCDC47-206ENST00000584112 CDC25AP30304 524 aa12.19□□□□□ -0.46
CCDC47-206ENST00000584112 NPTX2P47972 431 aa12.19□□□□□ -0.46
CCDC47-206ENST00000584112 ELAVL2Q12926 359 aaKnown RBP12.19□□□□□ -0.46
CCDC47-206ENST00000584112 ZRSR1Q15695 479 aaKnown RBP12.19□□□□□ -0.46
CCDC47-206ENST00000584112 HYIQ5T013 277 aa12.19□□□□□ -0.46
CCDC47-206ENST00000584112 NT5DC1Q5TFE4 455 aa12.19□□□□□ -0.46
CCDC47-206ENST00000584112 EEF1DP3Q658K8 133 aa12.19□□□□□ -0.46
CCDC47-206ENST00000584112 RINT1Q6NUQ1 792 aa12.19□□□□□ -0.46
CCDC47-206ENST00000584112 SPATA31D4Q6ZUB0 917 aa12.19□□□□□ -0.46
CCDC47-206ENST00000584112 MMTAG2Q9BU76 263 aaKnown RBP12.19□□□□□ -0.46
CCDC47-206ENST00000584112 RUSC1Q9BVN2 902 aa12.19□□□□□ -0.46
CCDC47-206ENST00000584112 MRPL4Q9BYD3 311 aaKnown RBP12.19□□□□□ -0.46
CCDC47-206ENST00000584112 RHOBTB2Q9BYZ6 727 aa12.19□□□□□ -0.46
CCDC47-206ENST00000584112 GPR62Q9BZJ7 368 aa12.19□□□□□ -0.46
CCDC47-206ENST00000584112 PLEKHA4Q9H4M7 779 aa12.19□□□□□ -0.46
CCDC47-206ENST00000584112 PIDD1Q9HB75 910 aa12.19□□□□□ -0.46
CCDC47-206ENST00000584112 POLD4Q9HCU8 107 aa12.19□□□□□ -0.46
CCDC47-206ENST00000584112 KMT5AQ9NQR1 393 aa12.19□□□□□ -0.46
CCDC47-206ENST00000584112 KCND2Q9NZV8 630 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms