RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 KRT34O76011 436 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 KRT36O76013 467 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 UNC5CO95185 931 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 TM4SF1P30408 202 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 HOXA7P31268 230 aaPredicted RBP11.17□□□□□ -0.62
RNF43-207ENST00000583753 FMO1Q01740 532 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 KPNB1Q14974 876 aaKnown RBP11.17□□□□□ -0.62
RNF43-207ENST00000583753 EFTUD2Q15029 972 aaKnown RBP eCLIP11.17□□□□□ -0.626e-8■■■■□ 23.1
RNF43-207ENST00000583753 RGS9BPQ6ZS82 235 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 ZDHHC14Q8IZN3 488 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 PIP4K2CQ8TBX8 421 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 ZNF341Q9BYN7 854 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 PCYOX1Q9UHG3 505 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 SERPINB3P29508 390 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 PTDSS1P48651 473 aaKnown RBP11.17□□□□□ -0.62
RNF43-207ENST00000583753 LMNB2Q03252 620 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 MKRN3Q13064 507 aaKnown RBP11.17□□□□□ -0.62
RNF43-207ENST00000583753 C1orf228Q6PIY5 440 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 THNSL1Q8IYQ7 743 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 GRAMD1AQ96CP6 724 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 KREMEN1Q96MU8 473 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 SH3GL3Q99963 347 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 WHRNQ9P202 907 aa11.17□□□□□ -0.62
RNF43-207ENST00000583753 DPPA5A6NC42 116 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 GRAP2O75791 330 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 PAEPP09466 180 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 WEE2P0C1S8 567 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 SRGAP2CP0DJJ0 459 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 TAC1P20366 129 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 ARL4CP56559 192 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 BNIP1Q12981 228 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 RNF220Q5VTB9 566 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 SNX30Q5VWJ9 437 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 ARMC3Q5W041 872 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 ARID3BQ8IVW6 561 aaPredicted RBP11.16□□□□□ -0.62
RNF43-207ENST00000583753 FAM13CQ8NE31 585 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 TCP10LQ8TDR4 215 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 SLC26A7Q8TE54 656 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 ATXN7L3BQ96GX2 97 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 ACAP3Q96P50 834 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 RMDN3Q96TC7 470 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 IFT122Q9HBG6 1241 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 PAPOLBQ9NRJ5 636 aaKnown RBP11.16□□□□□ -0.62
RNF43-207ENST00000583753 TAF1P21675 1872 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 NCANO14594 1321 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 CFLARO15519 480 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 ATP9AO75110 1047 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 ATP5HO75947 161 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 HLA-DRAP01903 254 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 BGNP21810 368 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 CALB2P22676 271 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 NFX1Q12986 1120 aaKnown RBP11.16□□□□□ -0.62
RNF43-207ENST00000583753 MTFR1Q15390 333 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 PPP6R3Q5H9R7 873 aaPredicted RBP11.16□□□□□ -0.62
RNF43-207ENST00000583753 MIS18BP1Q6P0N0 1132 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 C1orf131Q8NDD1 294 aaKnown RBP11.16□□□□□ -0.62
RNF43-207ENST00000583753 ADAM7Q9H2U9 754 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 RNPEPL1Q9HAU8 725 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 WRAP73Q9P2S5 460 aaPredicted RBP11.16□□□□□ -0.62
RNF43-207ENST00000583753 USP21Q9UK80 565 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 SLC12A4Q9UP95 1085 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 MYH3P11055 1940 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 CST8O60676 142 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 CETPP11597 493 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 TAS2R40P59535 323 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 BPIFB4P59827 614 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 CAV1Q03135 178 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 KRT81Q14533 505 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 SLC1A5Q15758 541 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 MFSD7Q6UXD7 560 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 FAM71DQ8N9W8 422 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 FAF2Q96CS3 445 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 MSTO1Q9BUK6 570 aa11.16□□□□□ -0.62
RNF43-207ENST00000583753 ATF5Q9Y2D1 282 aaPredicted RBP11.16□□□□□ -0.62
RNF43-207ENST00000583753 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.15□□□□□ -0.62
RNF43-207ENST00000583753 SRRM3A6NNA2 597 aaPredicted RBP11.15□□□□□ -0.62
RNF43-207ENST00000583753 K7ERI5 159 aa11.15□□□□□ -0.62
RNF43-207ENST00000583753 NFIBO00712 420 aa11.15□□□□□ -0.62
RNF43-207ENST00000583753 CHRNB2P17787 502 aa11.15□□□□□ -0.62
RNF43-207ENST00000583753 ATP4AP20648 1035 aa11.15□□□□□ -0.62
RNF43-207ENST00000583753 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.15□□□□□ -0.62
RNF43-207ENST00000583753 CEP128Q6ZU80 1094 aa11.15□□□□□ -0.62
RNF43-207ENST00000583753 EFCAB3Q8N7B9 438 aa11.15□□□□□ -0.62
RNF43-207ENST00000583753 STK32AQ8WU08 396 aa11.15□□□□□ -0.62
RNF43-207ENST00000583753 MANSC1Q9H8J5 431 aa11.15□□□□□ -0.62
RNF43-207ENST00000583753 KIAA1586Q9HCI6 787 aa11.15□□□□□ -0.62
RNF43-207ENST00000583753 SEPT10Q9P0V9 454 aa11.15□□□□□ -0.62
RNF43-207ENST00000583753 NYAP2Q9P242 653 aa11.15□□□□□ -0.62
RNF43-207ENST00000583753 ZBTB12Q9Y330 459 aaPredicted RBP11.15□□□□□ -0.62
RNF43-207ENST00000583753 SPDYE5A6NIY4 337 aa11.15□□□□□ -0.62
RNF43-207ENST00000583753 RNF8O76064 485 aa11.15□□□□□ -0.62
RNF43-207ENST00000583753 MYL2P10916 166 aa11.15□□□□□ -0.62
RNF43-207ENST00000583753 BMPR2Q13873 1038 aa11.15□□□□□ -0.62
RNF43-207ENST00000583753 Q4G0T1 1027 aa11.15□□□□□ -0.62
RNF43-207ENST00000583753 RFWD3Q6PCD5 774 aa11.15□□□□□ -0.62
RNF43-207ENST00000583753 EMC1Q8N766 993 aa11.15□□□□□ -0.62
RNF43-207ENST00000583753 ABTB1Q969K4 478 aaPredicted RBP11.15□□□□□ -0.62
RNF43-207ENST00000583753 PSMC3IPQ9P2W1 217 aaPredicted RBP11.15□□□□□ -0.62
RNF43-207ENST00000583753 SLC9A2Q9UBY0 812 aa11.15□□□□□ -0.62
RNF43-207ENST00000583753 PACSIN3Q9UKS6 424 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms