RNA–Protein interactions for RNA: ENST00000583634.1

TSEN54-210, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 282 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-210ENST00000583634 CXCL8P10145 99 aa13.11□□□□□ -0.31
TSEN54-210ENST00000583634 ITGA4P13612 1032 aa13.11□□□□□ -0.31
TSEN54-210ENST00000583634 GCLMP48507 274 aa13.11□□□□□ -0.31
TSEN54-210ENST00000583634 MXI1P50539 228 aa13.11□□□□□ -0.31
TSEN54-210ENST00000583634 MYL7Q01449 175 aa13.11□□□□□ -0.31
TSEN54-210ENST00000583634 PPP3CAQ08209 521 aa13.11□□□□□ -0.31
TSEN54-210ENST00000583634 TRIM14Q14142 442 aa13.11□□□□□ -0.31
TSEN54-210ENST00000583634 SYCP1Q15431 976 aa13.11□□□□□ -0.31
TSEN54-210ENST00000583634 EXOC3L4Q17RC7 722 aa13.11□□□□□ -0.31
TSEN54-210ENST00000583634 DUOXA2Q1HG44 320 aa13.11□□□□□ -0.31
TSEN54-210ENST00000583634 SLC10A6Q3KNW5 377 aa13.11□□□□□ -0.31
TSEN54-210ENST00000583634 TMC6Q7Z403 805 aa13.11□□□□□ -0.31
TSEN54-210ENST00000583634 SMG8Q8ND04 991 aaKnown RBP13.11□□□□□ -0.31
TSEN54-210ENST00000583634 ANKRD36BP1Q96IX9 119 aa13.11□□□□□ -0.31
TSEN54-210ENST00000583634 TMEM117Q9H0C3 514 aa13.11□□□□□ -0.31
TSEN54-210ENST00000583634 TLE6Q9H808 572 aa13.11□□□□□ -0.31
TSEN54-210ENST00000583634 MMRN2Q9H8L6 949 aa13.11□□□□□ -0.31
TSEN54-210ENST00000583634 RNF216Q9NWF9 866 aaPredicted RBP13.11□□□□□ -0.31
TSEN54-210ENST00000583634 IMPACTQ9P2X3 320 aa13.11□□□□□ -0.31
TSEN54-210ENST00000583634 HCSTQ9UBK5 93 aa13.11□□□□□ -0.31
TSEN54-210ENST00000583634 PARP2Q9UGN5 583 aa13.11□□□□□ -0.31
TSEN54-210ENST00000583634 USP15Q9Y4E8 981 aaPredicted RBP13.11□□□□□ -0.31
TSEN54-210ENST00000583634 TBKBP1A7MCY6 615 aa13.1□□□□□ -0.31
TSEN54-210ENST00000583634 EOMESO95936 686 aa13.1□□□□□ -0.31
TSEN54-210ENST00000583634 TNNC2P02585 160 aa13.1□□□□□ -0.31
TSEN54-210ENST00000583634 C4BPAP04003 597 aaKnown RBP13.1□□□□□ -0.31
TSEN54-210ENST00000583634 TPM1P09493 284 aa13.1□□□□□ -0.31
TSEN54-210ENST00000583634 TMEM191BP0C7N4 346 aa13.1□□□□□ -0.31
TSEN54-210ENST00000583634 ERVFC1P60507 584 aa13.1□□□□□ -0.31
TSEN54-210ENST00000583634 ZXDAP98168 799 aa13.1□□□□□ -0.31
TSEN54-210ENST00000583634 CBWD6Q4V339 395 aa13.1□□□□□ -0.31
TSEN54-210ENST00000583634 CBWD3Q5JTY5 395 aa13.1□□□□□ -0.31
TSEN54-210ENST00000583634 CBWD5Q5RIA9 395 aa13.1□□□□□ -0.31
TSEN54-210ENST00000583634 SPOUT1Q5T280 376 aaKnown RBP13.1□□□□□ -0.31
TSEN54-210ENST00000583634 ALKAL1Q6UXT8 129 aa13.1□□□□□ -0.31
TSEN54-210ENST00000583634 SLC24A5Q71RS6 500 aa13.1□□□□□ -0.31
TSEN54-210ENST00000583634 SV2AQ7L0J3 742 aa13.1□□□□□ -0.31
TSEN54-210ENST00000583634 BMP8AQ7Z5Y6 402 aa13.1□□□□□ -0.31
TSEN54-210ENST00000583634 PPFIBP1Q86W92 1011 aa13.1□□□□□ -0.31
TSEN54-210ENST00000583634 EHBP1Q8NDI1 1231 aa13.1□□□□□ -0.31
TSEN54-210ENST00000583634 VN1R2Q8NFZ6 395 aa13.1□□□□□ -0.31
TSEN54-210ENST00000583634 ZNF516Q92618 1163 aa13.1□□□□□ -0.31
TSEN54-210ENST00000583634 RPGRIP1Q96KN7 1286 aa13.1□□□□□ -0.31
TSEN54-210ENST00000583634 SNX27Q96L92 541 aa13.1□□□□□ -0.31
TSEN54-210ENST00000583634 PPP1R9BQ96SB3 815 aa13.1□□□□□ -0.31
TSEN54-210ENST00000583634 APOL6Q9BWW8 343 aa13.1□□□□□ -0.31
TSEN54-210ENST00000583634 NXF3Q9H4D5 531 aaKnown RBP13.1□□□□□ -0.31
TSEN54-210ENST00000583634 GIT1Q9Y2X7 761 aa13.1□□□□□ -0.31
TSEN54-210ENST00000583634 COQ4Q9Y3A0 265 aa13.1□□□□□ -0.31
TSEN54-210ENST00000583634 C2CD2Q9Y426 696 aa13.1□□□□□ -0.31
TSEN54-210ENST00000583634 DAAM1Q9Y4D1 1078 aa13.1□□□□□ -0.31
TSEN54-210ENST00000583634 PCDHB7Q9Y5E2 793 aa13.1□□□□□ -0.31
TSEN54-210ENST00000583634 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.1□□□□□ -0.31
TSEN54-210ENST00000583634 FNDC1Q4ZHG4 1894 aaPredicted RBP13.1□□□□□ -0.31
TSEN54-210ENST00000583634 XPOTO43592 962 aaKnown RBP13.09□□□□□ -0.31
TSEN54-210ENST00000583634 PHACTR2O75167 634 aa13.09□□□□□ -0.31
TSEN54-210ENST00000583634 RECQL4O94761 1208 aa13.09□□□□□ -0.31
TSEN54-210ENST00000583634 AKAP5P24588 427 aa13.09□□□□□ -0.31
TSEN54-210ENST00000583634 FAM189BP81408 668 aa13.09□□□□□ -0.31
TSEN54-210ENST00000583634 TFAMQ00059 246 aaKnown RBP13.09□□□□□ -0.31
TSEN54-210ENST00000583634 KCNMA1Q12791 1236 aa13.09□□□□□ -0.31
TSEN54-210ENST00000583634 CBX2Q14781 532 aaPredicted RBP13.09□□□□□ -0.31
TSEN54-210ENST00000583634 TMEM132DQ14C87 1099 aa13.09□□□□□ -0.31
TSEN54-210ENST00000583634 ZACNQ401N2 412 aa13.09□□□□□ -0.31
TSEN54-210ENST00000583634 XKR4Q5GH76 650 aa13.09□□□□□ -0.31
TSEN54-210ENST00000583634 FIGNQ5HY92 759 aa13.09□□□□□ -0.31
TSEN54-210ENST00000583634 JADE1Q6IE81 842 aa13.09□□□□□ -0.31
TSEN54-210ENST00000583634 C15orf39Q6ZRI6 1047 aa13.09□□□□□ -0.31
TSEN54-210ENST00000583634 ECHDC2Q86YB7 292 aa13.09□□□□□ -0.31
TSEN54-210ENST00000583634 SPC24Q8NBT2 197 aa13.09□□□□□ -0.31
TSEN54-210ENST00000583634 FBXL13Q8NEE6 735 aa13.09□□□□□ -0.31
TSEN54-210ENST00000583634 NEK11Q8NG66 645 aa13.09□□□□□ -0.31
TSEN54-210ENST00000583634 CRACR2AQ9BSW2 395 aa13.09□□□□□ -0.31
TSEN54-210ENST00000583634 EDEM3Q9BZQ6 932 aa13.09□□□□□ -0.31
TSEN54-210ENST00000583634 PLCB1Q9NQ66 1216 aa13.09□□□□□ -0.31
TSEN54-210ENST00000583634 GCNT4Q9P109 453 aa13.09□□□□□ -0.31
TSEN54-210ENST00000583634 CNTN3Q9P232 1028 aa13.09□□□□□ -0.31
TSEN54-210ENST00000583634 SIK3Q9Y2K2 1263 aa13.09□□□□□ -0.31
TSEN54-210ENST00000583634 HES2Q9Y543 173 aa13.09□□□□□ -0.31
TSEN54-210ENST00000583634 PCDHB12Q9Y5F1 795 aa13.09□□□□□ -0.31
TSEN54-210ENST00000583634 TDRD15B5MCY1 1934 aaKnown RBP13.08□□□□□ -0.32
TSEN54-210ENST00000583634 C9IYK1 514 aa13.08□□□□□ -0.32
TSEN54-210ENST00000583634 FGF18O76093 207 aa13.08□□□□□ -0.32
TSEN54-210ENST00000583634 KCNE1P15382 129 aa13.08□□□□□ -0.32
TSEN54-210ENST00000583634 TRIM21P19474 475 aaKnown RBP13.08□□□□□ -0.32
TSEN54-210ENST00000583634 PON1P27169 355 aa13.08□□□□□ -0.32
TSEN54-210ENST00000583634 WNT7BP56706 349 aa13.08□□□□□ -0.32
TSEN54-210ENST00000583634 BIRC3Q13489 604 aa13.08□□□□□ -0.32
TSEN54-210ENST00000583634 LMBRD2Q68DH5 695 aaPredicted RBP13.08□□□□□ -0.32
TSEN54-210ENST00000583634 TRAPPC11Q7Z392 1133 aa13.08□□□□□ -0.32
TSEN54-210ENST00000583634 CCDC150Q8NCX0 1101 aa13.08□□□□□ -0.32
TSEN54-210ENST00000583634 OR5B17Q8NGF7 314 aa13.08□□□□□ -0.32
TSEN54-210ENST00000583634 KIF12Q96FN5 646 aa13.08□□□□□ -0.32
TSEN54-210ENST00000583634 APOL5Q9BWW9 433 aa13.08□□□□□ -0.32
TSEN54-210ENST00000583634 PHF7Q9BWX1 381 aaPredicted RBP13.08□□□□□ -0.32
TSEN54-210ENST00000583634 LSM14BQ9BX40 385 aaKnown RBP13.08□□□□□ -0.32
TSEN54-210ENST00000583634 RNF39Q9H2S5 420 aa13.08□□□□□ -0.32
TSEN54-210ENST00000583634 ELAC1Q9H777 363 aaKnown RBP13.08□□□□□ -0.32
TSEN54-210ENST00000583634 TLR9Q9NR96 1032 aa13.08□□□□□ -0.32
TSEN54-210ENST00000583634 RAB20Q9NX57 234 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms