RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.58■□□□□ 0.42e-7■■■□□ 19.2
CDK5RAP3-228ENST00000583363 FBXL5Q9UKA1 691 aa17.58■□□□□ 0.4
CDK5RAP3-228ENST00000583363 YBX2Q9Y2T7 364 aaKnown RBP17.58■□□□□ 0.4
CDK5RAP3-228ENST00000583363 R3HCC1Q9Y3T6 440 aaKnown RBP17.58■□□□□ 0.4
CDK5RAP3-228ENST00000583363 REV3LO60673 3130 aa17.57■□□□□ 0.4
CDK5RAP3-228ENST00000583363 UCHL3P15374 230 aa17.57■□□□□ 0.4
CDK5RAP3-228ENST00000583363 CLCNKBP51801 687 aa17.57■□□□□ 0.4
CDK5RAP3-228ENST00000583363 CCDC85BQ15834 202 aaPredicted RBP17.57■□□□□ 0.4
CDK5RAP3-228ENST00000583363 UPP1Q16831 310 aa17.57■□□□□ 0.4
CDK5RAP3-228ENST00000583363 SPOPLQ6IQ16 392 aa17.57■□□□□ 0.4
CDK5RAP3-228ENST00000583363 GJB7Q6PEY0 223 aa17.57■□□□□ 0.4
CDK5RAP3-228ENST00000583363 ARHGEF19Q8IW93 802 aa17.57■□□□□ 0.4
CDK5RAP3-228ENST00000583363 SPC24Q8NBT2 197 aa17.57■□□□□ 0.4
CDK5RAP3-228ENST00000583363 ATXN2LQ8WWM7 1075 aaKnown RBP17.57■□□□□ 0.4
CDK5RAP3-228ENST00000583363 IQCDQ96DY2 449 aa17.57■□□□□ 0.4
CDK5RAP3-228ENST00000583363 UROC1Q96N76 676 aa17.57■□□□□ 0.4
CDK5RAP3-228ENST00000583363 FAM193BQ96PV7 902 aaPredicted RBP17.57■□□□□ 0.4
CDK5RAP3-228ENST00000583363 NAA15Q9BXJ9 866 aaKnown RBP17.57■□□□□ 0.4
CDK5RAP3-228ENST00000583363 MRPL9Q9BYD2 267 aaKnown RBP17.57■□□□□ 0.4
CDK5RAP3-228ENST00000583363 NRDE2Q9H7Z3 1164 aa17.57■□□□□ 0.4
CDK5RAP3-228ENST00000583363 RC3H2Q9HBD1 1191 aaKnown RBP17.57■□□□□ 0.4
CDK5RAP3-228ENST00000583363 UBE2TQ9NPD8 197 aaPredicted RBP17.57■□□□□ 0.4
CDK5RAP3-228ENST00000583363 THEGQ9P2T0 379 aa17.57■□□□□ 0.4
CDK5RAP3-228ENST00000583363 APEX2Q9UBZ4 518 aa17.57■□□□□ 0.4
CDK5RAP3-228ENST00000583363 MSRAQ9UJ68 235 aa17.57■□□□□ 0.4
CDK5RAP3-228ENST00000583363 DAAM1Q9Y4D1 1078 aa17.57■□□□□ 0.4
CDK5RAP3-228ENST00000583363 NUB1Q9Y5A7 615 aa17.57■□□□□ 0.4
CDK5RAP3-228ENST00000583363 SLC4A7Q9Y6M7 1214 aa17.57■□□□□ 0.4
CDK5RAP3-228ENST00000583363 CASTOR2A6NHX0 329 aa17.56■□□□□ 0.4
CDK5RAP3-228ENST00000583363 RNF225M0QZC1 329 aaPredicted RBP17.56■□□□□ 0.4
CDK5RAP3-228ENST00000583363 PODXLO00592 558 aa17.56■□□□□ 0.4
CDK5RAP3-228ENST00000583363 B4GALT3O60512 393 aa17.56■□□□□ 0.4
CDK5RAP3-228ENST00000583363 TRIM21P19474 475 aaKnown RBP17.56■□□□□ 0.4
CDK5RAP3-228ENST00000583363 POLR2FP61218 127 aaKnown RBP17.56■□□□□ 0.4
CDK5RAP3-228ENST00000583363 NOP14P78316 857 aaKnown RBP17.56■□□□□ 0.4
CDK5RAP3-228ENST00000583363 RNASELQ05823 741 aaKnown RBP17.56■□□□□ 0.4
CDK5RAP3-228ENST00000583363 MYO1EQ12965 1108 aa17.56■□□□□ 0.4
CDK5RAP3-228ENST00000583363 ZNF699Q32M78 642 aa17.56■□□□□ 0.4
CDK5RAP3-228ENST00000583363 IQCEQ6IPM2 695 aa17.56■□□□□ 0.4
CDK5RAP3-228ENST00000583363 FAM117BQ6P1L5 589 aa17.56■□□□□ 0.4
CDK5RAP3-228ENST00000583363 DCLRE1AQ6PJP8 1040 aa17.56■□□□□ 0.4
CDK5RAP3-228ENST00000583363 CD300LGQ6UXG3 332 aa17.56■□□□□ 0.4
CDK5RAP3-228ENST00000583363 RRAGAQ7L523 313 aa17.56■□□□□ 0.4
CDK5RAP3-228ENST00000583363 PPFIBP1Q86W92 1011 aa17.56■□□□□ 0.4
CDK5RAP3-228ENST00000583363 CPLX3Q8WVH0 158 aa17.56■□□□□ 0.4
CDK5RAP3-228ENST00000583363 FAXDC2Q96IV6 333 aa17.56■□□□□ 0.4
CDK5RAP3-228ENST00000583363 ASB2Q96Q27 587 aa17.56■□□□□ 0.4
CDK5RAP3-228ENST00000583363 PAAF1Q9BRP4 392 aa17.56■□□□□ 0.4
CDK5RAP3-228ENST00000583363 IMPG2Q9BZV3 1241 aa17.56■□□□□ 0.4
CDK5RAP3-228ENST00000583363 MTIF3Q9H2K0 278 aaKnown RBP17.56■□□□□ 0.4
CDK5RAP3-228ENST00000583363 IMPACTQ9P2X3 320 aa17.56■□□□□ 0.4
CDK5RAP3-228ENST00000583363 CACNG4Q9UBN1 327 aa17.56■□□□□ 0.4
CDK5RAP3-228ENST00000583363 DNAJC12Q9UKB3 198 aa17.56■□□□□ 0.4
CDK5RAP3-228ENST00000583363 CAPN11Q9UMQ6 739 aa17.56■□□□□ 0.4
CDK5RAP3-228ENST00000583363 TDRD15B5MCY1 1934 aaKnown RBP17.55■□□□□ 0.4
CDK5RAP3-228ENST00000583363 FNDC1Q4ZHG4 1894 aaPredicted RBP17.55■□□□□ 0.4
CDK5RAP3-228ENST00000583363 A0A1W2PQJ5 194 aa17.55■□□□□ 0.4
CDK5RAP3-228ENST00000583363 GJB5O95377 273 aa17.55■□□□□ 0.4
CDK5RAP3-228ENST00000583363 GYPCP04921 128 aa17.55■□□□□ 0.4
CDK5RAP3-228ENST00000583363 ALDH2P05091 517 aa17.55■□□□□ 0.4
CDK5RAP3-228ENST00000583363 IGFBP4P22692 258 aa17.55■□□□□ 0.4
CDK5RAP3-228ENST00000583363 IGFBP6P24592 240 aaPredicted RBP17.55■□□□□ 0.4
CDK5RAP3-228ENST00000583363 PNPLA4P41247 253 aa17.55■□□□□ 0.4
CDK5RAP3-228ENST00000583363 LILRA4P59901 499 aa17.55■□□□□ 0.4
CDK5RAP3-228ENST00000583363 HTRA4P83105 476 aaPredicted RBP17.55■□□□□ 0.4
CDK5RAP3-228ENST00000583363 TRIM14Q14142 442 aa17.55■□□□□ 0.4
CDK5RAP3-228ENST00000583363 PAN2Q504Q3 1202 aaKnown RBP17.55■□□□□ 0.4
CDK5RAP3-228ENST00000583363 ZNF667Q5HYK9 610 aa17.55■□□□□ 0.4
CDK5RAP3-228ENST00000583363 CMTR2Q8IYT2 770 aaKnown RBP17.55■□□□□ 0.4
CDK5RAP3-228ENST00000583363 FAM81BQ96LP2 452 aa17.55■□□□□ 0.4
CDK5RAP3-228ENST00000583363 SLC9A7Q96T83 725 aa17.55■□□□□ 0.4
CDK5RAP3-228ENST00000583363 TMEM175Q9BSA9 504 aa17.55■□□□□ 0.4
CDK5RAP3-228ENST00000583363 STK33Q9BYT3 514 aa17.55■□□□□ 0.4
CDK5RAP3-228ENST00000583363 CWH43Q9H720 699 aa17.55■□□□□ 0.4
CDK5RAP3-228ENST00000583363 SLC28A3Q9HAS3 691 aa17.55■□□□□ 0.4
CDK5RAP3-228ENST00000583363 CEP72Q9P209 647 aa17.55■□□□□ 0.4
CDK5RAP3-228ENST00000583363 AJAP1Q9UKB5 411 aaPredicted RBP17.55■□□□□ 0.4
CDK5RAP3-228ENST00000583363 FHOD1Q9Y613 1164 aa17.55■□□□□ 0.4
CDK5RAP3-228ENST00000583363 SCN1AP35498 2009 aa17.54■□□□□ 0.4
CDK5RAP3-228ENST00000583363 SPTLC1O15269 473 aa17.54■□□□□ 0.4
CDK5RAP3-228ENST00000583363 COL9A1P20849 921 aa17.54■□□□□ 0.4
CDK5RAP3-228ENST00000583363 RFX1P22670 979 aa17.54■□□□□ 0.4
CDK5RAP3-228ENST00000583363 PAX3P23760 479 aa17.54■□□□□ 0.4
CDK5RAP3-228ENST00000583363 CASP14P31944 242 aa17.54■□□□□ 0.4
CDK5RAP3-228ENST00000583363 TAF6P49848 677 aa17.54■□□□□ 0.4
CDK5RAP3-228ENST00000583363 RABGGTBP53611 331 aa17.54■□□□□ 0.4
CDK5RAP3-228ENST00000583363 GCNT1Q02742 428 aa17.54■□□□□ 0.4
CDK5RAP3-228ENST00000583363 WDR72Q3MJ13 1102 aa17.54■□□□□ 0.4
CDK5RAP3-228ENST00000583363 HERC6Q8IVU3 1022 aa17.54■□□□□ 0.4
CDK5RAP3-228ENST00000583363 LRRC43Q8N309 656 aa17.54■□□□□ 0.4
CDK5RAP3-228ENST00000583363 PPM1KQ8N3J5 372 aa17.54■□□□□ 0.4
CDK5RAP3-228ENST00000583363 BAP1Q92560 729 aa17.54■□□□□ 0.4
CDK5RAP3-228ENST00000583363 RABGGTAQ92696 567 aa17.54■□□□□ 0.4
CDK5RAP3-228ENST00000583363 KAT5Q92993 513 aa17.54■□□□□ 0.4
CDK5RAP3-228ENST00000583363 ZNF560Q96MR9 790 aa17.54■□□□□ 0.4
CDK5RAP3-228ENST00000583363 KREMEN1Q96MU8 473 aa17.54■□□□□ 0.4
CDK5RAP3-228ENST00000583363 PPP1R9BQ96SB3 815 aa17.54■□□□□ 0.4
CDK5RAP3-228ENST00000583363 NLRC4Q9NPP4 1024 aa17.54■□□□□ 0.4
CDK5RAP3-228ENST00000583363 GDAP2Q9NXN4 497 aa17.54■□□□□ 0.4
CDK5RAP3-228ENST00000583363 NXF1Q9UBU9 619 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms